BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946744 Length=350 Score E Sequences producing significant alignments: (Bits) Value AT4G15660.1 | Symbols: | Thioredoxin superfamily protein | chr... 518 2e-146 AT4G15670.1 | Symbols: | Thioredoxin superfamily protein | chr... 468 2e-131 AT4G15700.1 | Symbols: | Thioredoxin superfamily protein | chr... 440 4e-123 AT4G15680.1 | Symbols: | Thioredoxin superfamily protein | chr... 403 5e-112 AT4G15690.1 | Symbols: | Thioredoxin superfamily protein | chr... 372 1e-102 > AT4G15660.1 | Symbols: | Thioredoxin superfamily protein | chr4:8925806-8926310 FORWARD LENGTH=505 Length=505 Score = 518 bits (280), Expect = 2e-146 Identities = 326/348 (94%), Gaps = 3/348 (1%) Strand=Plus/Plus Query 2 CCTTTTACATTATAACATCAATGGAGAAGCTACAAAAGATGATCTCCGAGAAGTCGGTAG 61 ||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 103 CCTATTACATTATAACACCAATGGAGAAGATACAAAAGATGATCTCCGAGAAGTCGGTAG 162 Query 62 TGATCTTTAGCAAGAATTCTTGCTGCATGTCGCACACAATCAAGACTCTCTTCTTAGACC 121 | || |||||||| || ||||| |||||||| |||||||||||||||||||||||||||| Sbjct 163 TAATATTTAGCAATAACTCTTGTTGCATGTCACACACAATCAAGACTCTCTTCTTAGACC 222 Query 122 TTGGCGTGAACCCGACGATCTATGAGTTAGACGAGATCAACAGAGGAAAAGAGGTAGAGC 181 |||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||| Sbjct 223 TTGGCGTGAACCCGACAATCTATGAGCTAGACGAGATCAACAGAGGAAAAGAGATAGAGT 282 Query 182 ATGCATTAGCTCAGCTTGGCTGTAGCCCGACCGTGCCAGTGGTGTTCATAGGAGGGCAGC 241 ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 283 ATGCATTGGCTCAGCTTGGCTGCAGCCCGACTGTGCCAGTGGTGTTCATAGGAGGGCAGC 342 Query 242 TTGTTGGTGGAGCCAATCAAGTCATGAGTCTCCATCTCAATCGTTCTCTCATTCCAATGC 301 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 343 TTGTTGGTGGAGCCAATCAAGTCATGAGTCTCCATCTCAACCGTTCTCTCATTCCAATGC 402 Query 302 TTAAACGCGTTGGGGCTTTATGGCTTTGATTAAATATTATAAAGGAAT 349 |||||||| ||||||||||||||||||||| |||||| | |||| ||| Sbjct 403 TTAAACGCTTTGGGGCTTTATGGCTTTGATAAAATAT-A-AAAG-AAT 447 > AT4G15670.1 | Symbols: | Thioredoxin superfamily protein | chr4:8929179-8929765 FORWARD LENGTH=587 Length=587 Score = 468 bits (253), Expect = 2e-131 Identities = 309/336 (92%), Gaps = 3/336 (1%) Strand=Plus/Plus Query 14 TAACATCAATGGAGAAGCTACAAAAGATGATCTCCGAGAAGTCGGTAGTGATCTTTAGCA 73 ||||| ||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||||| Sbjct 51 TAACAAAAATGGAGAAGCTACAGAAGATGACCTCGGAGAAGTCGTTAGTGATATTTAGCA 110 Query 74 AGAATTCTTGCTGCATGTCGCACACAATCAAGACTCTCTTCTTAGACCTTGGCGTGAACC 133 | || || ||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 111 AAAACTCATGCTGCATGTCGCACACAATCAAGACTCTCTTCTTAGACCTTGGCGTAAATC 170 Query 134 CGACGATCTATGAGTTAGACGAGATCAACAGAGGAAAAGAGGTAGAGCATGCATTAGCTC 193 ||||||| |||||| |||| ||||||||||||||||||||| ||||||| ||||| |||| Sbjct 171 CGACGATTTATGAGCTAGATGAGATCAACAGAGGAAAAGAGATAGAGCAAGCATTGGCTC 230 Query 194 AGCTTGGCTGTAGCCCGACCGTGCCAGTGGTGTTCATAGGAGGGCAGCTTGTTGGTGGAG 253 |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 231 AGCTTGGCTGCAGCCCGACCGTGCCAGTGGTGTTCATAGGAGGGCAGCTTGTCGGTGGAG 290 Query 254 CCAATCAAGTCATGAGTCTCCATCTCAATCGTTCTCTCATTCCAATGCTTAAACGCGTTG 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 291 CCAATCAAGTCATGAGTCTCCATCTCAACCGTTCTCTCATTCCAATGCTTAAACGCGTTG 350 Query 314 GGGCTTTATGGCTTTGATTAAATATTATAAAGGAAT 349 |||| |||||||||||| ||| || |||||| ||| Sbjct 351 GGGCGTTATGGCTTTGAC-AAA-AT-ATAAAGAAAT 383 > AT4G15700.1 | Symbols: | Thioredoxin superfamily protein | chr4:8937393-8937892 FORWARD LENGTH=500 Length=500 Score = 440 bits (238), Expect = 4e-123 Identities = 301/331 (91%), Gaps = 5/331 (2%) Strand=Plus/Plus Query 21 AATGGAGAAGCTACAAAAGATGATCTCCGAGAAGTCGGTAGTGATCTTTAGCAAGAATTC 80 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 152 AATGGAGAATCTACAAAAGATGATCTCCGAGAAGTCGGTAGTGATCTTTAGCAAGAACTC 211 Query 81 TTGCTGCATGTCGCACACAATCAAGACTCTCTTCTTAGACCTTGGCGTGAACCCGACGAT 140 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 212 TTGCTGCATGTCTCACACAATCAAGACTCTCTTCTTAGACCTTGGCGTGAACCCGACGAT 271 Query 141 CTATGAGTTAGACGAGATCAACAGAGGAAAAGAGGTAGAGCATGCATTAGCTCAGCTTGG 200 |||||| | || ||||| | ||||||||| ||| ||||||||||||| |||||||| || Sbjct 272 CTATGAACTCGATGAGATTAGCAGAGGAAAGGAGATAGAGCATGCATTGGCTCAGCTCGG 331 Query 201 CTGTAGCCCGACCGTGCCAGTGGTGTTCATAGGAGGGCAGCTTGTTGGTGGAGCCAATCA 260 || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 332 GTGCAGCCCGACAGTGCCAGTGGTGTTCATAGGAGGGCAGCTTGTTGGTGGAGCCAATCA 391 Query 261 AGTCATGAGTCTCCATCTCAATCGTTCTCTCATTCCAATGCTTAAACGCGTTGGGGCTTT 320 ||||||||||||||||||||| || || || ||||||||||||| |||| ||| ||||| Sbjct 392 AGTCATGAGTCTCCATCTCAACCGCTCCCTTGTTCCAATGCTTAAGCGCGCTGGAGCTTT 451 Query 321 ATGGCTTTGA-TTAAATATTATAAA-GGAAT 349 |||||||||| || || | ||||| ||||| Sbjct 452 ATGGCTTTGACTTCAA-A--ATAAATGGAAT 479 > AT4G15680.1 | Symbols: | Thioredoxin superfamily protein | chr4:8931652-8932295 FORWARD LENGTH=644 Length=644 Score = 403 bits (218), Expect = 5e-112 Identities = 293/330 (89%), Gaps = 2/330 (1%) Strand=Plus/Plus Query 4 TTTTACATTATAACATCAATGGAGAAGCTACAAAAGATGATCTCCGAGAAGTCGGTAGTG 63 ||| ||||||||| | ||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 144 TTTCACATTATAATACCAATGGATAAGCTACAGAAGATGATCTCCGAGAAGTCGGTAGTG 203 Query 64 ATCTTTAGCAAGAATTCTTGCTGCATGTCGCACACAATCAAGACTCTCTTCTTAGACCTT 123 ||||||||||| || || || |||||||| ||||| ||||||||||||||| ||||| || Sbjct 204 ATCTTTAGCAAAAACTCATGTTGCATGTCTCACACTATCAAGACTCTCTTCATAGACTTT 263 Query 124 GGCGTGAACCCGACGATCTATGAGTTAGACGAGATCAACAGAGGAAAAGAGGTAGAGCAT 183 |||||||| || |||||||||||| |||| ||||||||||||||||| ||| ||||||| Sbjct 264 GGCGTGAATCCAACGATCTATGAGCTAGATGAGATCAACAGAGGAAAGGAGATAGAGCAA 323 Query 184 GCATTAGCTCAGCTTGGCTGTAGCCCGACCGTGCCAGTGGTGTTCATAGGAGGGCAGCTT 243 ||||| |||||||||||||| ||||| |||||||| |||||||| || |||||||||||| Sbjct 324 GCATTGGCTCAGCTTGGCTGCAGCCCAACCGTGCCTGTGGTGTTTATTGGAGGGCAGCTT 383 Query 244 GTTGGTGGAGCCAATCAAGTCATGAGTCTCCATCTCAATCGTTCTCTCATTCCAATGCTT 303 ||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||| Sbjct 384 GTTGGTGGAGCCAATCAAGTCATGAGTCTCCATCTCAATCGCTCTCTGGTTCCTATGCTA 443 Query 304 AA-ACGCGTTGGGGCTTTATGGCTTTGATT 332 || | | ||||| || ||||||||||||| Sbjct 444 AAGAGG-GTTGGAGCACTATGGCTTTGATT 472 > AT4G15690.1 | Symbols: | Thioredoxin superfamily protein | chr4:8934324-8934921 FORWARD LENGTH=598 Length=598 Score = 372 bits (201), Expect = 1e-102 Identities = 273/309 (88%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 20 CAATGGAGAAGCTACAAAAGATGATCTCCGAGAAGTCGGTAGTGATCTTTAGCAAGAATT 79 |||||||||| ||||| ||||||||||| |||||||||||||| || ||||||||||| | Sbjct 119 CAATGGAGAACCTACAGAAGATGATCTCTGAGAAGTCGGTAGTAATTTTTAGCAAGAACT 178 Query 80 CTTGCTGCATGTCGCACACAATCAAGACTCTCTTCTTAGACCTTGGCGTGAACCCGACGA 139 | ||||||||||| || ||||| |||||||||||||||||| |||||||||||||||| | Sbjct 179 CATGCTGCATGTCTCATACAATTAAGACTCTCTTCTTAGACTTTGGCGTGAACCCGACTA 238 Query 140 TCTATGAGTTAGACGAGATCAACAGAGGAAAAGAGGTAGAGCATGCATTAGCTCAGCTTG 199 |||||||| | ||||||||||||| ||||| ||| ||||||| ||||| |||||||| | Sbjct 239 TCTATGAGCTCGACGAGATCAACATAGGAAGGGAGATAGAGCAAGCATTGGCTCAGCTCG 298 Query 200 GCTGTAGCCCGACCGTGCCAGTGGTGTTCATAGGAGGGCAGCTTGTTGGTGGAGCCAATC 259 | || ||||||||||| || ||||||||||| |||||||||||||||||||||||||||| Sbjct 299 GATGCAGCCCGACCGTTCCGGTGGTGTTCATTGGAGGGCAGCTTGTTGGTGGAGCCAATC 358 Query 260 AAGTCATGAGTCTCCATCTCAATCGTTCTCTCATTCCAATGCTTAAACGCGTTGGGGCTT 319 |||||||||||||||||||||| || || || |||| ||||||||||| | ||| || | Sbjct 359 AAGTCATGAGTCTCCATCTCAACCGCTCCCTTGTTCCTATGCTTAAACGTGCTGGAGCAT 418 Query 320 TATGGCTTT 328 ||||||||| Sbjct 419 TATGGCTTT 427 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16387286174 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5