BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946761 Length=2911 Score E Sequences producing significant alignments: (Bits) Value AT4G15530.5 | Symbols: PPDK | pyruvate orthophosphate dikinase ... 4619 0.0 > AT4G15530.5 | Symbols: PPDK | pyruvate orthophosphate dikinase | chr4:8864828-8870801 REVERSE LENGTH=2945 Length=2945 Score = 4619 bits (2501), Expect = 0.0 Identities = 2769/2900 (95%), Gaps = 11/2900 (0%) Strand=Plus/Plus Query 1 TGGTTTATGCTTTATAT----AAGAAAATGACAAGTATGATCGTGAAGACAACGCCGGAG 56 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 48 TGGTTTATGCTTTATATAAGAAAGAAAATGACAAGTATGATCGTGAAGACAACGCCGGAG 107 Query 57 CTCTTCAAAGGAAATGGAGTGTACCGTACGGATCATCTCGGCGAAAACCGAATGGTTAGT 116 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct 108 CTCTTCAAAGGAAATGGAGTGTTCCGTACGGATCATCTCGGAGAAAACCGAATGGTTAGT 167 Query 117 CGATCAAACCGGCTAGGTGATGGATCCAACAGTTTCCCTAGAACCGGTACAATCCATTGC 176 |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 168 CGATCAAACCGGCTAGGTGATGGATCAAACCGTTTCCCTAGAACCGGTACAATCCATTGC 227 Query 177 CAACGGTTAAGCATAGC-AAGAACCGGTTTGCATCGTGATACAAAGGCTCGAGCCATCCT 235 ||||||||||||||||| ||| ||||||||||||||||| || |||||||||||||| || Sbjct 228 CAACGGTTAAGCATAGCAAAG-ACCGGTTTGCATCGTGAGACGAAGGCTCGAGCCATACT 286 Query 236 TGGCCTTGTGTCCGATCCGGCCGCTTCCATAGCCCAAAAGCGTGTATTCACCTTTGGGAA 295 | ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 287 TAGCCCTGTGTCCGATCCGGCCGCTTCCATAGCCCAAAAGCGAGTATTCACCTTTGGAAA 346 Query 296 AGGAAGAAGCGAAGGCAACAAGGGCATGAAGTCCTTGTTGGGAGGGAAAGGAGCAAACCT 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 347 AGGAAGAAGCGAAGGCAACAAGGGCATGAAGTCCTTGTTGGGAGGGAAAGGAGCCAACCT 406 Query 356 GGCGGAGATGGCGAGCATAGGCTTGTCGGTGCCGCCGGGGCTAACCATATCTACGGAGGC 415 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 407 GGCGGAGATGGCTAGCATAGGCTTGTCGGTGCCGCCGGGGCTAACCATATCGACGGAGGC 466 Query 416 TTGTCAGCAGTATCAGATCGCCGGCAAGAAGCTTCCAGAAGGTTTATGGGAAGAGATCTT 475 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 467 TTGTCAGCAGTATCAGATCGCCGGCAAAAAGCTTCCAGAAGGTTTATGGGAAGAGATCTT 526 Query 476 GGAAGGTCTTTGCTTCATCGAACGTGACATTGGAGCTTCCCTCGCCGATCCCTCTAAGCC 535 ||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 527 AGAAGGTCTTAGCTTCATCGAACGTGACATTGGAGCTTCCCTCGCTGATCCCTCCAAGCC 586 Query 536 ACTCCTCCTCTCTGTTCGCTCCGGCGCCGCCATCTCAATGCCTGGTATGATGGACACTGT 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 587 ACTCCTCCTCTCTGTTCGCTCCGGCGCCGCCATCTCAATGCCTGGTATGATGGACACTGT 646 Query 596 ACTTAACCTTGGCTTAAACGACCAAGTCGTCGTTGGTTTGGCTGCCAAAAGCGGAGAGCG 655 ||||||||||||||| ||||||||||||||||||||| |||| || |||||||||||||| Sbjct 647 ACTTAACCTTGGCTTGAACGACCAAGTCGTCGTTGGTCTGGCCGCAAAAAGCGGAGAGCG 706 Query 656 TTTTGCTTACGATTCGTTCCGGCGTTTTCTTGATATGTTTGGCGATGTTGTGTTGGGAAT 715 |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 707 TTTTGCTTACGATTCGTTCCGGCGTTTTCTTGATATGTTTGGTGATGTTGTGATGGGAAT 766 Query 716 TCCACACGCCAAGTTTGAAGAGAAGTTAGAGAGGATGAAGGAGAGAAAAGGAGTAAAAAA 775 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| Sbjct 767 TCCACACGCCAAGTTTGAAGAGAAGTTAGAGAGAATGAAGGAGAGGAAAGGAGTTAAAAA 826 Query 776 TGACACAGAATTAAGCGCCACTGATCTTAAAGAATTGGTTGAGCAGTACAAGAGTGTTTA 835 |||||| || |||||||| ||||||| || ||||||||||||||||||||||||||||| Sbjct 827 TGACACTGACTTAAGCGCGGCTGATCTCAAGGAATTGGTTGAGCAGTACAAGAGTGTTTA 886 Query 836 CGTAGAGGCCAAGGGTCAAGAGTTTCCTTCAGATCCGAAGAAGCAATTGGAGCTAGCGAT 895 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 887 CTTAGAGGCCAAGGGTCAAGAGTTTCCTTCAGATCCAAAGAAGCAATTGGAGCTAGCGAT 946 Query 896 TGAAGCGGTATTCGATTCTTGGGATAGCCCTAGAGCGAACAAGTACAGAAGTATTAACCA 955 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 947 TGAAGCGGTATTCGATTCTTGGGATAGCCCGAGAGCGAACAAGTACAGAAGTATTAACCA 1006 Query 956 GATAACCGGATTGAAGGGAACCGCGGTAAACATTCAGTGTATGGTGTTTGGAAACATGGG 1015 |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1007 GATAACTGGATTGAAAGGAACCGCGGTTAACATTCAGTGTATGGTGTTTGGAAACATGGG 1066 Query 1016 GGACACTTCAGGGACTGGTGTTCTCTTCACCAGGAACCCTAGCACCGGAGAGAAGAAGCT 1075 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 1067 GGACACTTCAGGGACTGGTGTTCTCTTCACTAGGAACCCTAGCACAGGAGAGAAGAAGCT 1126 Query 1076 CTACGGAGAGTTTCTAGTCAATGCTCAGGGAGAGGATGTGGTGGCAGGGATTAGAACACC 1135 || || ||||||||||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct 1127 TTATGGCGAGTTTCTAGTTAATGCTCAGGGAGAGGATGTGGTTGCAGGGATAAGAACACC 1186 Query 1136 CGAAGATTTGGATACAATGAGGAGATTAATGCCTGAGGCTTATGCAGAACTTGTTGAGAA 1195 ||||||||||||||||||| |||||| |||||||||||||| || |||||||||||||| Sbjct 1187 AGAAGATTTGGATACAATGAAGAGATTTATGCCTGAGGCTTACGCTGAACTTGTTGAGAA 1246 Query 1196 CTGCAACATCTTAGAAAGACATTACAAAGACATGATGGATATCGAATTCACCGTACAAGA 1255 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1247 CTGCAACATCTTAGAAAGACATTACAAAGACATGATGGATATTGAATTCACAGTACAAGA 1306 Query 1256 GGAGAGATTGTGGATGCTGCAATGTAGAGCGGGTAAGCGAACGGGTAAAGGCGCGGTGAA 1315 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1307 AGAGAGATTGTGGATGCTGCAATGCAGAGCGGGTAAGCGAACGGGTAAAGGCGCCGTGAA 1366 Query 1316 GATAGCAGTTGATATGGTAAGTGAAGGGCTTGTAGATAAATCTTCTGCAATCAAAATGGT 1375 ||||||||||||||||||| ||||||||||||| || ||||||||||| ||||||||||| Sbjct 1367 GATAGCAGTTGATATGGTAGGTGAAGGGCTTGTTGAGAAATCTTCTGCTATCAAAATGGT 1426 Query 1376 GGAGCCTCAACATCTTGATCAACTACTTCACCCACAGTTTCATGATCCATCGGGGTATCG 1435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1427 GGAGCCTCAACATCTTGATCAACTACTTCACCCACAGTTTCATGATCCATCGGGGTATCG 1486 Query 1436 TGAAAAAGTTGTGGCGAAAGGCTTACCGGCGTCACCAGGAGCTGCGGTTGGGCAGGTTGT 1495 ||||||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||||| Sbjct 1487 TGAAAAAGTGGTGGCCAAAGGCTTACCTGCGTCACCAGGAGCGGCGGTTGGACAGGTTGT 1546 Query 1496 GTTCACGGCGGAGGAAGCCGAAGCTTGGCATTCTCAAGGAAAAACCGTGATTCTAGTTCG 1555 |||||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||| Sbjct 1547 GTTCACGGCGGAGGAAGCCGAAGCTTGGCATTCTCAGGGTAAAACTGTGATTCTGGTTCG 1606 Query 1556 AACGGAGACAAGCCCTGATGATGTTGGAGGTATGCACGCAGCCGAAGGTATATTGACGGC 1615 ||| |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct 1607 AACTGAGACAAGCCCTGACGATGTGGGAGGTATGCACGCAGCGGAAGGTATATTGACGGC 1666 Query 1616 GAGAGGTGGAATGACGTCACACGCGGCGGTTGTTGCTCGCGGTTGGGGAAAATGTTGCAT 1675 ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1667 TAGAGGAGGAATGACGTCACACGCGGCTGTTGTTGCTCGCGGTTGGGGAAAATGTTGCAT 1726 Query 1676 CGCTGGTTGCTCCGAAATTCGTGTCGACGAGAACCATAAGGTTCTATTGATTGGAGATTT 1735 |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1727 TGCTGGTTGTTCCGAGATTCGTGTCGACGAGAACCACAAGGTTCTATTGATTGGAGATTT 1786 Query 1736 GACTATTCATGAAGGCGAATGGATCTCGATGAACGGATCAACCGGTGAGGTTATATTAGG 1795 ||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1787 GACGATTAATGAAGGCGAATGGATCTCAATGAACGGATCAACCGGTGAGGTTATATTAGG 1846 Query 1796 GAAACAAGCATTGGCTCCTCCGGCTTTGAGTCCAGATTTAGAGACTTTCATGTCCTGGGC 1855 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1847 GAAACAAGCATTGGCTCCTCCGGCTTTAAGTCCAGATTTGGAGACTTTCATGTCCTGGGC 1906 Query 1856 TGATGCAATCAGACGTCTCAAGGTTATGGCGAATGCGGATACCCCTGAAGACGCGATTGC 1915 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 1907 TGATGCAATCAGACGTCTCAAGGTTATGGCGAATGCGGATACACCTGAAGACGCCATTGC 1966 Query 1916 AGCAAGGAAAAACGGCGCTCAAGGGATCGGGCTTTGTAGGACCGAACATATGTTCTTTGG 1975 ||| ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||| Sbjct 1967 AGCTAGGAAAAACGGAGCTCAAGGAATCGGGCTTTGTAGGACAGAGCATATGTTCTTTGG 2026 Query 1976 CGCAGATAGGATTAAAGCAGTGAGAAAGATGATAATGGCGGTAACAACAGAGCAAAGGAA 2035 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2027 AGCAGATAGGATTAAAGCAGTGAGAAAGATGATAATGGCGGTAACAACAGAGCAAAGGAA 2086 Query 2036 AGCTTCTCTCGACATCTTGCTTCCTTACCAACGTTCGGATTTCGAAGGGATCTTCCGCGC 2095 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2087 AGCTTCTCTCGACATCTTGCTTCCTTACCAACGTTCGGATTTCGAAGGGATCTTCCGTGC 2146 Query 2096 TATGGATGGTTTACCGGTAACAATTCGCCTGTTAGACCCTCCACTTCACGAGTTTCTCCC 2155 |||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||| Sbjct 2147 TATGGATGGTTTACCGGTAACAATCCGTTTGTTAGACCCTCCGCTTCACGAGTTTCTCCC 2206 Query 2156 GGAAGGCGATTTGGACAACATTGTAAATGAGTTAGCTGCAGAAACAGGCGTGAAAGAAGA 2215 ||||||||| ||||||||||||||| ||||| |||||| |||||| || ||||||||||| Sbjct 2207 GGAAGGCGACTTGGACAACATTGTACATGAGCTAGCTGAAGAAACTGGTGTGAAAGAAGA 2266 Query 2216 CGAAGTCTTGTCACGAATAGAGAAACTCTCTGAAGTGAATCCAATGCTTGGTTTCCGCGG 2275 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2267 TGAAGTCTTGTCACGGATAGAGAAACTCTCTGAAGTGAATCCAATGCTTGGTTTCCGCGG 2326 Query 2276 TTGCAGGCTCGGAATATCGTATCCTGAGCTAACGGAAATGCAAGCGCGTGCAATTTTTGA 2335 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2327 TTGCAGGCTCGGAATATCGTATCCAGAGCTAACGGAGATGCAAGCGCGTGCAATTTTTGA 2386 Query 2336 AGCAGCAGCGTCAATGCAGGACCAAGGTGTTACTGTTC-TTCCTGAGATTATGGTTCCAC 2394 ||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 2387 AGCTGCAGCGTCAATGCAGGACCAAGGTGTTACTG-TCATTCCTGAGATTATGGTTCCAC 2445 Query 2395 TTGTAGGAACTCCTCAGGAATTGGGTCACCAAGTTAATGTAATCCGAAAAGTGGCAAAGA 2454 ||||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||| Sbjct 2446 TTGTAGGAACTCCTCAGGAATTGGGTCACCAAGTTGATGTAATTCGTAAAGTTGCAAAGA 2505 Query 2455 AAGTATTTGCTGAGAAGGGTCATACCGTGAGCTACAAGGTTGGGACAATGATTGAGATCC 2514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2506 AAGTATTTGCTGAGAAGGGTCATACCGTGAGCTACAAGGTTGGGACAATGATTGAGATCC 2565 Query 2515 CTCGAGCCGCGCTCATTGCAGATGAGATTGCGAAAGAGGCGGAGTTTTTCTCGTTCGGGA 2574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2566 CTCGAGCCGCGCTCATTGCAGATGAGATTGCGAAAGAGGCGGAGTTTTTCTCGTTCGGGA 2625 Query 2575 CAAATGACTTGACGCAGATGACGTTTGGATACAGTAGAGACGATGTTGGCAAGTTTCTAC 2634 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2626 CAAACGACTTGACGCAGATGACGTTTGGATACAGTAGAGACGATGTCGGCAAGTTTCTAC 2685 Query 2635 CGATTTACCTCGCCCAAGGAATCTTACAGCACGACCCTTTTGAGGTTCTTGATCAGCAAG 2694 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2686 CGATTTACCTCGCCAAAGGAATCTTACAGCACGACCCTTTTGAGGTTCTTGATCAGCAAG 2745 Query 2695 GTGTAGGGCAATTGATCAAGATGGCGACAGAAAAAGGACGAGCAGCTAGGCCTAGCCTCA 2754 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2746 GTGTAGGGCAATTGATCAAGATGGCGACAGAAAAAGGACGAGCAGCTAGGCCTAGCCTCA 2805 Query 2755 AGGTTGGGATATGTGGAGAACATGGAGGAGATCCATCGTCTGTGGGATTCTTTGCTGAAG 2814 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2806 AGGTTGGGATATGTGGAGAACATGGAGGAGATCCATCTTCTGTGGGATTCTTTGCTGAAG 2865 Query 2815 CAGGACTTGACTATGTCTCTTGTTCTCCTTTCAGAGTTCCAATTGCAAGGCTTGCAGCTG 2874 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2866 CAGGACTTGACTATGTCTCTTGTTCTCCTTTCAGGGTTCCAATTGCAAGGCTTGCAGCTG 2925 Query 2875 CTCAAGT--T-GTTGCATGA 2891 ||||||| | ||||||||| Sbjct 2926 CTCAAGTAGTTGTTGCATGA 2945 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 144681463612 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5