BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg946934 Length=758 Score E Sequences producing significant alignments: (Bits) Value AT4G14440.1 | Symbols: ATECI3, ECI3, HCD1 | 3-hydroxyacyl-CoA d... 1125 0.0 AT4G14430.1 | Symbols: IBR10, ATECI2, ECI2, ECHIB, PEC12 | indo... 532 1e-150 > AT4G14440.1 | Symbols: ATECI3, ECI3, HCD1 | 3-hydroxyacyl-CoA dehydratase 1 | chr4:8306745-8307753 REVERSE LENGTH=1009 Length=1009 Score = 1125 bits (609), Expect = 0.0 Identities = 708/756 (94%), Gaps = 6/756 (1%) Strand=Plus/Plus Query 5 TCCTTAACCTGA-GCACCATGTGTACGTTAGAGAAGCGTGGCGATCTCTTTCACCTAACC 63 |||||||| | | ||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct 75 TCCTTAACGT-ACGCACCATGTGTACGTTAGAGAAGCGCGGCGATCTCTTTCTCCTAACC 133 Query 64 CTAACCGGTGACGACGAGCACAGATTCCACCCGGACACGATCGCCTCCGTTCTCTCGCTT 123 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 134 CTAACCGGCGAAGACGAGCACAGATTCCACCCCGACACGATCGCCTCTGTTCTCTCGCTT 193 Query 124 CTTGAACAAGCTAAA-TCTCAATCTACAAAAGGATCCGTCCTCATCACTACCGGTCACGG 182 ||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 194 CTTGAACAAGC-AAAGTCTCAATCCACAAAAGGATCCGTCCTCATCACTACCGGTCACGG 252 Query 183 AAAGTTCTTCTCCAATGGCTTTGATCTCGCATGGGCCCAATCCGCTGGACACGGGGCTAT 242 |||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| Sbjct 253 AAAGTTCTTCTCCAATGGCTTTGACCTCGCGTGGGCTCAATCCGCTGGACACGGTGCTAT 312 Query 243 AGAACGGATGCACCAAATGGTCAAATCCTTCAAACCCGTGTTAGCGGCCCTCCTCGATCT 302 | |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| Sbjct 313 AAAACGGATGCACCAAATGGTCAAATCCTTTAAACCGGTGTTAGCCGCCCTCCTCGATCT 372 Query 303 TCCAATGCCGACGATCGCCGCCTTGAACGGCCACGCAGCCGCCTCGGGGCTGATGTTTGC 362 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 373 TCCAATGCCGACGATCGCCGCCTTGAACGGCCACGCGGCAGCCTCGGGGCTGATGTTTGC 432 Query 363 GCTGAGCCATGACTACGTTTTCATGAGGAAAGACCGTGGGGTTCTATACATGAGCGAGGT 422 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 433 GCTGAGCCACGACTACGTTTTCATGAGGAAAGACCGTGGGGTTCTATATATGAGCGAGGT 492 Query 423 GGACATCGGGCTGCCGGTGCCAGACTACTTCTCGGCGTTGGTTGTAGCTAAGGTCGGGTC 482 |||||||||||| |||||||| |||||||||||||||||||| || |||||||| ||||| Sbjct 493 GGACATCGGGCTACCGGTGCCGGACTACTTCTCGGCGTTGGTCGTGGCTAAGGTTGGGTC 552 Query 483 AGGTATCGCGAGAAGGGAGCTGTTGCTGAGCGGGAAGAAGCTCAAAGGAGAAGACGCGGT 542 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 553 AGGTATCGCGAGAAGGGAGCTGTTACTGAGCGGGAAGAAGCTCAAAGGAGAAGAAGCGGT 612 Query 543 GGCTCTCGGGATCGTGGACTCCGCGGCGCACGATAGCGCTGAAGGTGTTGTGGAGGCTAC 602 ||||||||||||||||||||| |||||||| ||||| || |||||||| ||||||||||| Sbjct 613 GGCTCTCGGGATCGTGGACTCAGCGGCGCATGATAGTGCGGAAGGTGTGGTGGAGGCTAC 672 Query 603 AGTGAGCCTTGGGGAAAGTTTGGCTGCTAAGAAATGGAATGGAGAGGTGTATGCATCCAT 662 |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||| Sbjct 673 AGTGAGCCTTGGAGAAAGTTTGGCCGCTAAGAAATGGAATGGTGAGGTGTATGCAACCAT 732 Query 663 TAGGA-GAAGTTTGTATCCGGAGCTTTGTCGGATGCTGGAGTTAACGGCCAATAACTTGG 721 ||||| || |||||||||||||||||||||||||| | || |||||||| |||||||||| Sbjct 733 TAGGAAGA-GTTTGTATCCGGAGCTTTGTCGGATGGTTGATTTAACGGCAAATAACTTGG 791 Query 722 CAACTCACAATCTCTAGAAACTCTCATTGTCTTGTT 757 | |||||||| ||||||||||||||||||||||||| Sbjct 792 CCACTCACAACCTCTAGAAACTCTCATTGTCTTGTT 827 > AT4G14430.1 | Symbols: IBR10, ATECI2, ECI2, ECHIB, PEC12 | indole-3-butyric acid response 10 | chr4:8304600-8305705 REVERSE LENGTH=1106 Length=1106 Score = 532 bits (288), Expect = 1e-150 Identities = 564/695 (81%), Gaps = 28/695 (4%) Strand=Plus/Plus Query 18 CACCATGTGTACGTTAGAGAAGCGTGGCGATCTCTTTCACCTAACCCTAACCGGTGACGA 77 ||||||||||||||||||||| || ||||||||||| | ||||||||||||||| |||| Sbjct 70 CACCATGTGTACGTTAGAGAAACGCGGCGATCTCTTCCTCCTAACCCTAACCGGAGACGG 129 Query 78 CGAGCACAGATTCCACCCGGACACGATCGCCTCCGTTCTCTCGCTTCTTGAACAAGCTAA 137 ||| |||||||||||||| ||||| || ||| || ||||||| ||||| |||||||| || Sbjct 130 CGAACACAGATTCCACCCCGACACAATTGCCACCATTCTCTCCCTTCTCGAACAAGCCAA 189 Query 138 ATCTCAATCTACAAAAGGATCCGTCCTCATCACTACCGGTC-ACGG-AAAGTTCTTCTCC 195 ||||||||| || |||||| |||||||||| ||| | | |||| ||| ||||||||| Sbjct 190 ATCTCAATCCACCCGTGGATCCATCCTCATCACCACC-GCCAACGGCAAA-TTCTTCTCC 247 Query 196 AATGGCTTTGATCTCGCATGGGCCCAATCCGCTGGA--C---A-CGGGGCTATAGAA-CG 248 || || || ||||| |||||||| ||| |||| ||| | | ||| || | || || Sbjct 248 AACGGATTCGATCTTGCATGGGCTCAAACCGCCGGATCCAAAACCGGAGCCGCA-AACCG 306 Query 249 GATGCACCAAATGGTCAAATCCTTCAAACCCGTGTTAGCGGCCCTCCTCGATCTTCCAAT 308 | | ||||||||||| |||| |||||||| ||| |||| || || |||||||| || || Sbjct 307 GCTTCACCAAATGGTTGAATCATTCAAACCGGTGGTAGCAGCGCTTCTCGATCTCCCTAT 366 Query 309 GCCGACGATCGCCGCCTTGAACGGCCACGCAGCCGCCTCGGGGCTGATGTTTGCGCT--G 366 |||||||||||||||||||||||||||||| |||||| |||| |||| |||| ||| | Sbjct 367 GCCGACGATCGCCGCCTTGAACGGCCACGCCGCCGCCGCGGGATTGAT-TTTG-GCTTTG 424 Query 367 AGCCATGACTACGTTTTCATGAGGAAAGACCGTGGGGTTCTATACATGAGCGAGGTGGAC 426 |||||||| ||||| |||||||||||||| ||||||||||| || ||||| || || ||| Sbjct 425 AGCCATGATTACGTGTTCATGAGGAAAGATCGTGGGGTTCTGTATATGAGTGAAGTTGAC 484 Query 427 ATCGGGCTGCCGGTGCCAGACTACTTCTCGGCGTTGGTT-GTAGCTAAGGTCGGGTC-AG 484 |||||||| || |||| || || ||||||||||||||| | |||||| ||||| | || Sbjct 485 ATCGGGCTTTCGATGCCGGATTATTTCTCGGCGTTGGTTAGG-GCTAAGATCGGGACGAG 543 Query 485 GTATCG-CGAGAAGGGAGCTGTTGCTGAGCGGGAAGAAGCTCAAAGGAGAAGACGCGGTG 543 | || |||| || ||||||||| |||| ||||||||| | | ||||||||| |||||| Sbjct 544 -TG-CGGCGAGGAGAGAGCTGTTGTTGAGTGGGAAGAAGATTAGAGGAGAAGAAGCGGTG 601 Query 544 GCTCTCGGGATCGTGGACTCCGCGGCGCACGATAGCGCTGAAGGTGTTGTGGAGGCTACA 603 | | | ||||| || ||||| || ||| | ||||| | ||||||||||| | ||||| Sbjct 602 GGTTTGGGGATTGTTGACTCGGCCGCGTATGATAGTGAGGAAGGTGTTGTTGTGGCTAGT 661 Query 604 GTGAGCCTTGG-G-GAAAGTTTGGCTGCTAAGAAATGGAATGGAGAGGTGTATGCATCCA 661 ||| ||||||| | |||| || ||| || |||||||||| || ||||| ||||| || | Sbjct 662 GTGCGCCTTGGTGAGAAA-TT-GGCGGCGAAGAAATGGAGCGGTGAGGTTTATGCGTCGA 719 Query 662 TTAGGA-GAAGTTTGTATCCGGAGCTTTGTCGGAT 695 | |||| || |||||||||||||||||||| |||| Sbjct 720 TAAGGAAGA-GTTTGTATCCGGAGCTTTGTGGGAT 753 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36821629751 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5