BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg947029
Length=1498
Score E
Sequences producing significant alignments: (Bits) Value
AT4G13940.1 | Symbols: HOG1, EMB1395, SAHH1, MEE58, ATSAHH1 | S... 2442 0.0
AT3G23810.1 | Symbols: SAHH2, ATSAHH2 | S-adenosyl-l-homocystei... 1692 0.0
> AT4G13940.1 | Symbols: HOG1, EMB1395, SAHH1, MEE58, ATSAHH1 |
S-adenosyl-L-homocysteine hydrolase | chr4:8054862-8057139
FORWARD LENGTH=1990
Length=1990
Score = 2442 bits (1322), Expect = 0.0
Identities = 1443/1502 (96%), Gaps = 5/1502 (0%)
Strand=Plus/Plus
Query 1 CAAATCTCAGATCTAG---AAAAATGGCGTTGCTCGTCGAGAAGACCTCAAGTGGCCGTG 57
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 47 CAAATCTCAGATCTAGCTCAACCATGGCGTTGCTCGTCGAGAAGACCTCAAGTGGCCGTG 106
Query 58 AATACAAGGTCAAAGACATGTCTCAAGCCGATTTCGGTCGTCTCGAACTCGAGCTCGCCG 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 107 AATACAAGGTCAAAGACATGTCTCAAGCCGATTTCGGTCGTCTCGAACTCGAGCTCGCCG 166
Query 118 AAGTTGAGATGCCTGGACTCATGGCTTGTCGTACCGAGTTCGGACCTTCTCAACCATTCA 177
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 167 AAGTTGAGATGCCTGGACTCATGGCTTGTCGTACCGAATTCGGACCTTCTCAGCCATTCA 226
Query 178 AAGGCGCTAGAATCACCGGATCTCTTCACATGACGATCCAAACCGCCGTACTCATCGAAA 237
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 227 AAGGCGCTAGAATCACCGGATCTCTTCACATGACCATCCAAACCGCCGTACTCATCGAAA 286
Query 238 CCCTAACTGCTCTCGGTGCTGAAGTCAGATGGTGTTCCTGCAACATCTTCTCTACTCAAG 297
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 287 CCCTAACTGCTCTCGGTGCTGAAGTCAGATGGTGTTCCTGCAACATCTTTTCCACTCAAG 346
Query 298 ACCACGCCGCCGCCGCAATCGCTCGTGACTCCGCCGCTGTTTTCGCCTGGAAAGGTGAGA 357
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 347 ACCACGCCGCCGCAGCCATCGCTCGTGACTCCGCCGCTGTTTTCGCCTGGAAAGGTGAGA 406
Query 358 CGCTTCAGGAGTATTGGTGGTGTACGGAACGTGCTCTTGATTGGGGTCCAGGTGGTGGTC 417
| ||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct 407 CTCTTCAGGAGTACTGGTGGTGTACCGAGCGTGCTCTAGATTGGGGTCCAGGTGGTGGTC 466
Query 418 CTGATCTGATTGTTGATGATGGTGGTGATGCTACGCTTTTGATCCATGAGGGTGTTAAAG 477
|||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct 467 CTGATCTGATTGTTGATGATGGTGGTGACGCTACTCTTTTGATTCATGAGGGTGTTAAAG 526
Query 478 CTGAAGAGATTTTTGAGAAGACTGGTCAAGTTCCTGATCCTACTTCTACTGATAACCCTG 537
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 527 CTGAGGAGATCTTTGAGAAGACTGGTCAAGTTCCTGATCCTACTTCTACTGATAACCCTG 586
Query 538 AGTTTCAGATCGTGTTGTCTATTATCAAGGAAGGTCTTCAGGTTGATCCTAAGAAGTACC 597
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 587 AGTTTCAGATCGTGTTGTCTATTATCAAGGAAGGTCTTCAAGTTGATCCTAAGAAGTACC 646
Query 598 ATAAGATGAAGGAGAGACTTGTTGGTGTCTCTGAGGAAACTACTACTGGTGTTAAGAGGC 657
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 647 ACAAGATGAAGGAGAGACTTGTTGGTGTCTCTGAGGAAACTACCACTGGTGTTAAGAGGC 706
Query 658 TTTATCAGATGCAGGAAAATGGAACTCTCTTGTTCCCTGCCATTAACGTCAATGACTCTG 717
|||| ||||||||| ||||||||||||| |||||||||||||||||||| || |||||||
Sbjct 707 TTTACCAGATGCAGCAAAATGGAACTCTTTTGTTCCCTGCCATTAACGTTAACGACTCTG 766
Query 718 TCACCAAGAGCAAGTTCGACAATTTGTATGGTTGCCGTCACTCACTTCCTGATGGTCTCA 777
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 767 TCACCAAGAGCAAGTTCGACAACTTGTATGGTTGCCGTCACTCACTCCCTGATGGTCTCA 826
Query 778 TGAGGGCCACTGATGTTATGATCGCTGGAAAGGTTGCTGTTATCTGTGGATATGGTGATG 837
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 827 TGAGGGCCACTGATGTCATGATCGCTGGAAAGGTTGCTGTTATCTGTGGATATGGTGATG 886
Query 838 TTGGAAAGGGTTGTGCTGCTGCCATGAAGACTGCTGGTGCTAGAGTCATTGTGACTGAGA 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 887 TTGGAAAGGGTTGTGCTGCTGCCATGAAGACTGCTGGTGCTAGAGTCATTGTGACTGAGA 946
Query 898 TTGATCCCATCTGTGCCCTTCAAGCTTTGATGGAAGGACTTCAGGTTCTTACCCTTGAGG 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 947 TTGATCCCATCTGTGCCCTTCAAGCTTTGATGGAAGGACTTCAGGTTCTTACCCTTGAGG 1006
Query 958 ATGTTGTCTCTGAAGCTGATATCTTTGTGACCACTACTGGTAACAAAGATATCATCATGG 1017
|||||||||| ||||||||||||||||| ||||| || ||||||||||| ||||||||||
Sbjct 1007 ATGTTGTCTCAGAAGCTGATATCTTTGTCACCACCACCGGTAACAAAGACATCATCATGG 1066
Query 1018 TTGACCACATGAGGAAGATGAAGAACAATGCTATTGTGTGCAACATTGGTCACTTTGACA 1077
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1067 TCGACCACATGAGGAAGATGAAGAACAACGCTATTGTGTGCAACATTGGTCACTTTGACA 1126
Query 1078 ACGAGATCGACATGCTCGGATTTGAGACTTACCCTGGTGTTAAGCGTATCACCATCAAGC 1137
| ||||| |||||||| ||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 1127 ATGAGATTGACATGCTTGGACTTGAGACTTACCCTGGTGTGAAGCGTATCACCATCAAGC 1186
Query 1138 CCCAGACTGACAGGTGGGTGTTCCCAGAGACAAAGACCGGAATCATTGTCTTGGCTGAGG 1197
| ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||
Sbjct 1187 CACAGACTGACAGGTGGGTGTTCCCAGAGACCAAGGCTGGAATCATTGTCTTGGCTGAGG 1246
Query 1198 GTCGTCTCATGAACTTGGGTTGTGCCACTGGTCACCCAAGTTTCGTGATGTCTTGCTCTT 1257
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1247 GTCGTCTGATGAACTTGGGTTGTGCCACTGGTCACCCAAGTTTCGTGATGTCTTGCTCTT 1306
Query 1258 TCACCAACCAGGTGATTGCCCAGCTTGAGCTCTGGAACGAGAA-GTCAAGCGGTAAGTAC 1316
||||||||||||||||||||||||| ||||||||||||||||| | ||||||| ||||||
Sbjct 1307 TCACCAACCAGGTGATTGCCCAGCTCGAGCTCTGGAACGAGAAAG-CAAGCGGAAAGTAC 1365
Query 1317 GAGAAGAAGGTGTACGTTCTTCCCAAGCATTTGGATGAGAAGGTTGCAGCACTTCACTTG 1376
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1366 GAGAAGAAGGTGTACGTTCTTCCCAAGCATTTGGATGAGAAGGTTGCATTACTTCACTTG 1425
Query 1377 GGCAAGCTTGGAGCCAGGCTTACTAAGCTGTCAAAGGACCAATCTGACTACATCAGCATT 1436
||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 1426 GGCAAGCTTGGAGCCAGGCTTACAAAGCTGTCAAAGGACCAATCTGACTACGTCAGCATT 1485
Query 1437 CCAATTGAGGGACCATACAAGCCTCCTCACTACAGGTACTgagagagagagagagTGGAC 1496
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1486 CCAATTGAGGGACCATACAAGCCTCCTCACTACAGGTACTGAGAGAGAGAGAGAGTCGAC 1545
Query 1497 AA 1498
||
Sbjct 1546 AA 1547
> AT3G23810.1 | Symbols: SAHH2, ATSAHH2 | S-adenosyl-l-homocysteine
(SAH) hydrolase 2 | chr3:8587664-8589713 REVERSE LENGTH=1849
Length=1849
Score = 1692 bits (916), Expect = 0.0
Identities = 1292/1475 (88%), Gaps = 20/1475 (1%)
Strand=Plus/Plus
Query 17 AAAAATGGCGTTGCTCGTCGAGAAGACCTCAAGTGGCCGTGAATACAAGGTCAAAGACAT 76
||||||||| ||||| || ||||| ||||||||||||||||||||||||||||| |||||
Sbjct 39 AAAAATGGCTTTGCTTGTAGAGAAAACCTCAAGTGGCCGTGAATACAAGGTCAAGGACAT 98
Query 77 GTCTCAAGCCGATTTCGGTCGTCTCGAACTCGAGCTCGCCGAAGTTGAGATGCCTGGACT 136
||| |||||||| ||||| ||||||||| ||||||| |||||||| || |||||||||||
Sbjct 99 GTCCCAAGCCGACTTCGGCCGTCTCGAAATCGAGCTAGCCGAAGTCGAAATGCCTGGACT 158
Query 137 CATGGCTTGTCG-TACCGAGTTCGGACCTTCTCAACCATTCAAAGGCGCTAGAATCACCG 195
| |||| || |||||| |||||||| ||||| ||| ||||||| || ||||||||||
Sbjct 159 TGTCTCTTG-CGTTACCGAATTCGGACCATCTCAGCCACTCAAAGGAGCAAGAATCACCG 217
Query 196 GATCTCTTCACATGACGATCCAAACCGCCGTACTCATCGAAACCCTAACTGCTCTCGGTG 255
| ||||| |||||||||||||||||||| || | ||||||||| |||| |||||||| |
Sbjct 218 GTTCTCTCCACATGACGATCCAAACCGCGGTTTTAATCGAAACCTTAACCGCTCTCGGCG 277
Query 256 CTGAAGTCAGATGGTGTTCCTGCAACATCTTCTCTACTCAAGACCACGCCGCCGCCGCAA 315
||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |
Sbjct 278 CTGAAGTCAGATGGTGTTCTTGCAACATCTTCTCCACTCAAGACCACGCCGCGGCCGCTA 337
Query 316 TCGCTCGTGACTCCGCCGCTGTTTTCGCCTGGAAAGGTGAGACGCTTCAGGAGTATTGGT 375
| |||||||| |||||||| || ||||| |||||||||||||| ||||| || |||||||
Sbjct 338 TTGCTCGTGATTCCGCCGCGGTGTTCGCTTGGAAAGGTGAGACTCTTCAAGAATATTGGT 397
Query 376 GGTGTACGGA-ACGTGCTCTTGATTGGGGTCCAGGTGGTGGTCCTGATCTGATTGTTGAT 434
||||||| || | | |||||||| |||||||| || |||||||||||||| || ||||||
Sbjct 398 GGTGTACAGAGA-GAGCTCTTGACTGGGGTCCTGGAGGTGGTCCTGATCTCATCGTTGAT 456
Query 435 GATGGTGGTGATGCTACGCTTTTGATCCATGAGGGTGTTAAAGCTGAAGAGATTTTTGAG 494
|| |||||||||||||| || ||||||||||| || ||||||||||||||||| ||||
Sbjct 457 GACGGTGGTGATGCTACACTGTTGATCCATGAAGGAGTTAAAGCTGAAGAGATCTTTGCC 516
Query 495 AAGACTGGTCAAGTT-CCTGATCCTACTTCTACTGATAA-CCCTGAGTTTCAGATCGTGT 552
|||| |||| | ||| ||||| || || ||||||||||| ||| ||||||||||||||
Sbjct 517 AAGAATGGT-ACGTTCCCTGACCCGACCTCTACTGATAATCCC-GAGTTTCAGATCGTCC 574
Query 553 TGTCTATTATCAAGGAAGGTCTTCAGGTTGATCCTAAGAAGTACCATAAGATGAAGGAGA 612
||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||||
Sbjct 575 TGTCTATTATCAAAGACGGTCTTCAAGTTGATCCCAAGAAGTACCATAAGATGAAGGAGA 634
Query 613 GACTT-GTTGGTGTCTCTGAGGAAACTACTACTGGTGTTAAGAGGCTTTATCAGATGCAG 671
|| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 635 GA-TTGGTTGGTGTCTCTGAGGAGACTACTACTGGTGTTAAGAGGCTTTATCAGATGCAG 693
Query 672 GAAAATGGAACTCTCTTGTTCCCTGCCATTAACGTCAATGACTCTGTCACCAAGAGCAAG 731
|| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 694 GAGACTGGAGCTCTCTTGTTCCCTGCCATTAACGTCAATGACTCTGTCACCAAGAGCAAG 753
Query 732 TTCGACAATTTGTATGGTTGCCGTCACTCACTTCCTGATGGTCTCATGAGGGCCACTGAT 791
|| ||||| ||||| || ||||| ||||| ||||| ||||||||||||||||| ||||||
Sbjct 754 TTTGACAACTTGTACGGATGCCGACACTCGCTTCCCGATGGTCTCATGAGGGCTACTGAT 813
Query 792 GTTATGATCGCTGGAAAGGTTGCTGTTATCTGTGGATATGGTGATGTTGGAAAGGGTTGT 851
|||||||| |||||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 814 GTTATGATTGCTGGAAAGGTTGCTGTTATCTGTGGTTATGGTGATGTAGGAAAAGGTTGT 873
Query 852 GCTGCTGCCATGAAGACTGCTGGTGCTAGAGTCATTGTGACTGAGATTGATCCCATCTGT 911
||||| || ||||| || || |||||| | ||||| ||||||||||||||||| ||||||
Sbjct 874 GCTGCAGCAATGAAAACCGCGGGTGCTCGTGTCATAGTGACTGAGATTGATCCAATCTGT 933
Query 912 GCCCTTCAAGCT-TTGATGGAAGGACTTCAGGTTCTTACCCTTGAGGATGTTGTCTCTGA 970
|| ||||| ||| || |||||||| ||||| ||||| |||||||||||||||||||| ||
Sbjct 934 GCTCTTCAGGCTCTT-ATGGAAGGTCTTCAAGTTCTGACCCTTGAGGATGTTGTCTCAGA 992
Query 971 AGCTGATATCTT-TGTGACCACTACTGGTAACAAAGATATCATCATGGTTGACCACATGA 1029
|||||||||||| ||| ||||||||||||||||||||||| || |||||||| |||||||
Sbjct 993 AGCTGATATCTTCTGT-ACCACTACTGGTAACAAAGATATTATTATGGTTGATCACATGA 1051
Query 1030 GGAAGATGAAGAACAATGCTATTGTGTGCAACATTGGTCACTTTGACAACGAGATCGACA 1089
||||||||||||||||||| ||||| || ||||||||||| |||||||| || |||||||
Sbjct 1052 GGAAGATGAAGAACAATGCCATTGTCTGTAACATTGGTCATTTTGACAATGAAATCGACA 1111
Query 1090 TGCTCGGATTTGAGACTTACCCTGGTGTTAAGCGTATCACCATCAAGCCCCAGACTGACA 1149
|||| ||| ||||||| ||||||||||| || ||||| ||||||||||| ||||| || |
Sbjct 1112 TGCTTGGACTTGAGACCTACCCTGGTGTGAAACGTATTACCATCAAGCCACAGACCGATA 1171
Query 1150 GGTGGGTGTTCCCAGAGACAAAGACCGGAATCATTGT-CTTGGCTGAGGGTCGTCTCATG 1208
|||||||||| || || || || | || |||||||| || | |||| |||||| | |||
Sbjct 1172 GGTGGGTGTTTCCTGATACCAACTCTGGCATCATTGTTCTAG-CTGAAGGTCGTTTGATG 1230
Query 1209 AACTTGGGTTGTGCCACTGGTCACCCAAGTTTCGTGATGTCTTGCTCTTTCACCAACCAG 1268
|||||||| || |||||||| ||||| |||||||||||||| ||||| ||||||||||||
Sbjct 1231 AACTTGGGATGCGCCACTGGACACCCGAGTTTCGTGATGTCGTGCTCATTCACCAACCAG 1290
Query 1269 GTGATTGCCCAGCTTGAGCTCTGGAACGAGAAGTCAAGCGGTAAGTACGAGAAGAAGGTG 1328
|||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1291 GTGATTGCACAGCTTGAGCTCTGGAACGAGAAGTCAAGCGGGAAGTATGAGAAGAAGGTC 1350
Query 1329 TACGTTCTTCCC-AAGCATTTGGATGAGAAGGTTGCAGCACTTCACTTGGGCAAGCTTGG 1387
|| ||| || || || || |||||||||||||| || ||||||||||| |||||||||||
Sbjct 1351 TATGTT-TTGCCTAAACACTTGGATGAGAAGGTAGCTGCACTTCACTTAGGCAAGCTTGG 1409
Query 1388 AGCCAGGCTTACTAAGCTGT-CAAAGGACCAATCTGACTACATCAGCATTCCAATTGAGG 1446
|| || || || ||||| | | ||||||||||||||||| ||||||| || |||| |
Sbjct 1410 TGCAAGACTCACCAAGCT-TACCAAGGACCAATCTGACTATGTCAGCATACCCGTTGAAG 1468
Query 1447 GACCATACAAGCCTCCTCACTACAGGTACTgagag 1481
| || ||||||||| |||||||||||||||||||
Sbjct 1469 GTCCTTACAAGCCTGTTCACTACAGGTACTGAGAG 1503
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73895202240
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5