BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg947216 Length=400 Score E Sequences producing significant alignments: (Bits) Value AT5G35740.1 | Symbols: | Carbohydrate-binding X8 domain superf... 586 5e-167 > AT5G35740.1 | Symbols: | Carbohydrate-binding X8 domain superfamily protein | chr5:13910418-13911160 REVERSE LENGTH=579 Length=579 Score = 586 bits (317), Expect = 5e-167 Identities = 373/400 (93%), Gaps = 3/400 (1%) Strand=Plus/Plus Query 1 TCATTGCCTTCT-TGGGAAACATGTCAACTTTCTTGATAAGGATACTTCTTCCTTTGCTT 59 |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 46 TCATTGCCTTCTCT-AGAAACATGTCAACTTTCTTGATAAGGATACTTCTTCCTTTGCTT 104 Query 60 ATCATAGCAATTACTATTCCTCAATGGTCAGAGGCAGAGTCGGAACAATGGTGCATAGCG 119 ||||||||||| ||| |||||| | | ||||||||||||||||||||||||||||||||| Sbjct 105 ATCATAGCAATGACTCTTCCTCGACGTTCAGAGGCAGAGTCGGAACAATGGTGCATAGCG 164 Query 120 GATGAACAAACGCCAGACGATGAGCTGCAGGCAGCCTTAGACTGGGCTTGCGGGAAAGGC 179 |||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct 165 GATGAACAAACGCCAGACGATGAGTTGCAAGCAGCCTTAGACTGGGCTTGCGGAAAAGGT 224 Query 180 GGAGCAGACTGCAGCAAAATGCAGCAGGAAAACCAGACTTGCTTCTTACCCAACACAATC 239 |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| Sbjct 225 GGAGCAGACTGCAGCAAAATGCAGCAGGAAAACCAGCCTTGCTTCTTGCCTAACACAATC 284 Query 240 AGGGATCATGCCTCCTTTGCTTTTAACAGTTATTACCAAACTTATAAGCACAAAGGTGGT 299 || |||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| Sbjct 285 AGAGATCATGCCTCCTTTGCTTTCAACAGTTACTACCAAACTTATAAAAACAAAGGTGGT 344 Query 300 TCTTGTTACTTCAAAGGAACTGCCATGATCACTGAGCTTGACCCCAGTCATGGTTCTTGC 359 |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 345 TCTTGTTACTTCAAAGGAGCTGCCATGATCACTGAGCTTGACCCCAGCCATGGTTCTTGC 404 Query 360 CACTATGAGTATAACCCCTGATTCCAATGAGACAGCCAAA 399 || ||||||||||||||||||||| || || ||||| ||| Sbjct 405 CAGTATGAGTATAACCCCTGATTCAAACGACACAGC-AAA 443 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18900673624 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5