BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg947488 Length=1321 Score E Sequences producing significant alignments: (Bits) Value AT5G42100.1 | Symbols: ATBG_PPAP, ATBG_PAP, BG_PPAP | beta-1,3-... 1997 0.0 > AT5G42100.1 | Symbols: ATBG_PPAP, ATBG_PAP, BG_PPAP | beta-1,3-glucanase_putative | chr5:16829151-16831219 REVERSE LENGTH=1638 Length=1638 Score = 1997 bits (1081), Expect = 0.0 Identities = 1248/1328 (94%), Gaps = 13/1328 (1%) Strand=Plus/Plus Query 2 ctctctctctctctctctcacttcatccatggcttctccttcttct-cagtttctcttct 60 ||||||||||||||||||||||||||| ||||||||| |||| ||| |||| |||||||| Sbjct 24 CTCTCTCTCTCTCTCTCTCACTTCATCTATGGCTTCTTCTTC-TCTGCAGTCTCTCTTCT 82 Query 61 ctctgttgtgccttgctctcctt-tctcttcctcacatcgtctcctccATCGGCATCAAC 119 ||||||| ||||||||||| || |||||||||| ||||||||||||||||||||||||| Sbjct 83 CTCTGTTTTGCCTTGCTCT-GTTCTCTCTTCCTCTCATCGTCTCCTCCATCGGCATCAAC 141 Query 120 TATGGCCAGGTCGCTAACAACCTTCCTCCCCCAAAAAACGTCATCCCTCTCCTCAAGTCT 179 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 142 TATGGCCAGGTCGCTAACAACCTTCCTCCCCCTAAAAACGTCATCCCTCTCCTCAAGTCT 201 Query 180 GTGGGAGCTACAAAAGTCAAGCTCTATGACGCCGATCCACAAGCCCTCCGTGCCTTCTCC 239 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 202 GTGGGAGCTACAAAAGTCAAGCTCTATGACGCCGATCCACAAGCCCTACGTGCCTTCGCC 261 Query 240 GGCTCCGGCTTCGAGCTCACCGTGGCCCTCGGCAACGAGTACCTGGCCCAGATGACCGAC 299 |||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||| Sbjct 262 GGCTCCGGCTTCGAGCTCACCGTGGCCCTCGGTAACGAGTACCTGGCTCAGATGAGCGAC 321 Query 300 CCTAATAAAGCCCAAGCCTGGGTGAAGGAGAACGTTCAAGCATACCTCCCCAACACCAAG 359 |||| ||||||||||| |||||||||||||||||| ||||| |||||||| ||||||||| Sbjct 322 CCTATTAAAGCCCAAGGCTGGGTGAAGGAGAACGTCCAAGCTTACCTCCCAAACACCAAG 381 Query 360 ATCGTGGCCATCGTAGTGGGAAACGAAGTCCTCACCTCCAACCAATCAGCCCTCACGGCG 419 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 382 ATCGTGGCCATCGTAGTGGGAAACGAAGTCCTCACCTCAAACCAGTCAGCCCTCACGGCA 441 Query 420 GCCCTCTTCCCGGCTATGCAGGGCATCCACGGCGCTCTGGTTGATTGTGGCCTGAACAAG 479 |||||||||||||||||||| |||||||||| |||||||| ||||||||||| |||||| Sbjct 442 GCCCTCTTCCCGGCTATGCAAAGCATCCACGGTGCTCTGGTGGATTGTGGCCTAAACAAG 501 Query 480 CAGATCTTTGTGACGACGGCTCACTCACTGGCCATCTTGGATGTGTCCTACCCTCCCTCG 539 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 502 CAGATCTTTGTGACGACGGCTCACTCACTAGCCATCTTGGATGTATCCTACCCTCCCTCG 561 Query 540 GCCACTTCCTTCCGCCGCGACCTTCTCAGCTCTCTCACTCCCATCTTGGACTTCCACGTC 599 ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||| Sbjct 562 GCCACTTCCTTCCGCCGCGACCTCCTCGGCTCCCTCACTCCCATCTTGGACTTCCACGTC 621 Query 600 AAGACAGGCTCACCAATCCTCATCAACGCCTACCCTTTCTTCGCCTACGAAGAAAACCCC 659 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 622 AAGACTGGCTCACCAATCCTCATCAACGCCTACCCTTTCTTCGCCTACGAAGAAAACCCC 681 Query 660 AAACACGTCTCTCTCGACTTCGTCCTCTTCCAACCAAATCAAGGCTTCACCGACCCTGGC 719 |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 682 AAACACGTTTCTCTCGACTTCGTACTCTTCCAACCAAATCAAGGCTTCACCGATCCTGGC 741 Query 720 TCTAATTTCCACTACGACAACATGCTCTTCGCTCAGGTCGACGCAGTCTATCACGCCCTT 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 742 TCTAATTTCCACTACGACAACATGCTCTTCGCTCAGGTCGACGCAGTCTATCACGCTCTT 801 Query 780 GACGCTGTCGGCATCAGCTACAAGAAAGTCCCCATAGTCGTCTCCGAGACCGGATGGCCT 839 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 802 GACGCTGTCGGCATCAGCTACAAGAAAGTTCCCATTGTCGTCTCCGAGACCGGATGGCCT 861 Query 840 TCCAACGGTGACCCGCAGGAGGTTGGAGCAACCTGCGACAATGCTCGCAAGTACAATGGG 899 ||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||| Sbjct 862 TCCAACGGTGACCCGCAAGAAGTCGGAGCCACCTGCGACAATGCTCGCAAGTACAATGGG 921 Query 900 AATCTGATCAAGATGATGATGAGCAAGAAAATGAGGACGCCCATTCGACCTGAGTGCGAT 959 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct 922 AATCTGATCAAGATGATGATGAGCAAGAAGATGAGGACGCCTATACGACCTGAGTGCGAT 981 Query 960 CTCACCATCTTTGTCTTTGCTCTCTTCAACGAGAACATGAAGCCTGGACCCACCTCCGAG 1019 ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 982 CTCACCATCTTCGTCTTTGCTCTCTTTAACGAGAACATGAAGCCTGGACCAACCTCCGAG 1041 Query 1020 AGGAACTACGGTCTCTTCAAACCTGACGGAACTCCGGTTTACTCTCTTGGGATCAAGACT 1079 |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 1042 AGGAACTACGGTCTCTTCAACCCTGACGGAACTCCGGTTTACTCACTTGGGATCAAGACC 1101 Query 1080 TCCTCCACTCATACTAGTGGTAG------CAGCAACTCCACTGGTGGTAGTGGTAGTAGC 1133 || |||||||||| ||||||||| |||||||||||||||||||||| | ||| || Sbjct 1102 TCTTCCACTCATAGTAGTGGTAGTGGTAGCAGCAACTCCACTGGTGGTAGTAGCAGTGGC 1161 Query 1134 AGCGGCGGTAACACTGGTGGCTCTTCCGGCGGTGGTGGTATCTACCCGCCGGTCACGGAT 1193 | |||||||||||||||||||||||| |||||||||| ||||| | ||| ||||||| | Sbjct 1162 GGTGGCGGTAACACTGGTGGCTCTTCCAGCGGTGGTGGCATCTATCAGCCAGTCACGGGT 1221 Query 1194 AACCCATCGCCGGATTACATGTCCATTTCCTCCGCCGGGGGAAAAGGCAGATTCGTTGAG 1253 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1222 AACCCATCACCGGATTACATGTCCATTTCCTCCGCCGGGGGAAAAGGCAGATTCGTTGAG 1281 Query 1254 TGTGTGTTCTTCTTCTTCCTGCTTTGCATCATCAAGCTTCGGTTGTAAAAGCAGCTTCCC 1313 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| | Sbjct 1282 TGTGTGTTGTTCTTCTTCTTGCTTTGCATCATCAAGCTTCGGTTGTAAAAGC---TTCTC 1338 Query 1314 CACTAGAT 1321 |||||||| Sbjct 1339 CACTAGAT 1346 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65009705775 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5