BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg947849 Length=652 Score E Sequences producing significant alignments: (Bits) Value AT5G39670.1 | Symbols: | Calcium-binding EF-hand family protei... 1016 0.0 > AT5G39670.1 | Symbols: | Calcium-binding EF-hand family protein | chr5:15883179-15884067 FORWARD LENGTH=889 Length=889 Score = 1016 bits (550), Expect = 0.0 Identities = 619/651 (95%), Gaps = 10/651 (2%) Strand=Plus/Plus Query 8 TCTAACAAAAGTTATGACTGAAAACCAATTATATAGCTTTATAACCATGGAGAAGAGTTC 67 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 79 TCTAACAAAAGTTATGACTGAAAACCAATTATATAGCTTTATAACCAT---GAAGAGTTC 135 Query 68 ATTGTCTAAATGCAAACAGTCTTCTTCTTTTTCTTTCCCTTTGTTTGGTCTGATCAACTT 127 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 136 ATTGTCTAAATGCAAACAGTCTTCTTCTTTGTCTTTCCCTTTGTTTGGTCTGATCAACTT 195 Query 128 CTTCCTCATCGGTTTTTTCAGATGGGTTTCTTTTGCTCAGTCATTTTTCTCCAGGTTTTG 187 ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || Sbjct 196 CTTCCTCATCGGTTTTTTCAGATGGGTTTCTTTTGCTCAGTTATTTTTCTCTAGGTTCTG 255 Query 188 GCCTCTTGTTCAACACCAGCAATGTGTTTCAGAGAAGAAGAGCAAAGATCTTGAGTTCCA 247 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 256 GCCTCTTGTTCAACACCAGCAATGTGTTTCCGAGAAGAAGAGCAAAGATCTTGAGTTCCA 315 Query 248 AACTTCGATCAAACACGAAGAATATC-----G-TGATGATGATGGTCTTTGTAGAGAAGA 301 |||||||||||||||||||||||||| | |||||||||||||||||| |||||||| Sbjct 316 AACTTCGATCAAACACGAAGAATATCGTGATGATGATGATGATGGTCTTTGCAGAGAAGA 375 Query 302 TGTAGGGATGGTTATGAAGAGCTTAGGGCTTTCCACCGACCAAGAATGTGAGGGACTTCA 361 |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||| Sbjct 376 TGTAGGGATGGTTATGAAAAGCTTAGGGCTTTCCACTGACCAAGAAAACGAGGGACTTCA 435 Query 362 AAAACAGTACAGTTCCGAGGAGCTTTCGAATCTGTTTGAAGAGAAAGAGCCGAGTTTGGA 421 |||||||||||||||| ||||| ||||||||||||| |||||||||||||| || || || Sbjct 436 AAAACAGTACAGTTCCAAGGAGGTTTCGAATCTGTTCGAAGAGAAAGAGCCAAGCTTAGA 495 Query 422 GGAAGTGAAGCAAGCTTTTGATGTCTTTGATGAAAACAGAGATGGGTTTATCGATCCAAT 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 496 GGAAGTGAAGCAAGCTTTTGATGTCTTTGATGAAAACAGAGATGGGTTTATCGATCCTAT 555 Query 482 AGATTTGCAGAGAGTTTTGACAATCCTTGGCTTAAAGCAAGGTTCTAACCTTGAGAATTG 541 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 556 AGATTTGCAGAGAGTTTTGACAATCCTTGGCTTAAAGCAAGGATCTAACCTTGAGAACTG 615 Query 542 CAGGAGAATGATCAGATCATTCGATGGAAATAAAGACGGAAGAATCGATTTCTATGGATT 601 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 616 CAGGAGAATGATCAGATCATTCGATGGAAGTAAAGACGGAAGAATCGATTTCTATGGATT 675 Query 602 TGTGAAATTCATGGAGAACAACTTCTGCTGAAATCGTATTTCCTCAA-GTA 651 |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 676 TGTGAAATTCATGGAGAACAACTTCTGCTGAAATCGTATTTCCTTAAAGTA 726 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 31496810169 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5