BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948148
Length=1076
Score E
Sequences producing significant alignments: (Bits) Value
AT5G47540.1 | Symbols: | Mo25 family protein | chr5:19283029-1... 1777 0.0
AT4G17270.1 | Symbols: | Mo25 family protein | chr4:9676127-96... 1112 0.0
> AT5G47540.1 | Symbols: | Mo25 family protein | chr5:19283029-19285698
REVERSE LENGTH=1638
Length=1638
Score = 1777 bits (962), Expect = 0.0
Identities = 1037/1074 (97%), Gaps = 2/1074 (0%)
Strand=Plus/Plus
Query 4 GATATCGGCGGTGCGAAAATGAAAGGGCTTTTCAAGTCTAAGCCACGCACTCCTGCTGAC 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 353 GATATCGGCGGTGCGAAGATGAAAGGGCTTTTCAAGTCTAAGCCACGCACTCCTGCTGAC 412
Query 64 CTTGTTCGACAAACGCGCGATCTCCTTCTCTACGCCGATCGATCTACCTCTTTGCCTGAC 123
|||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 413 CTTGTTCGACAAACCCGCGATCTCCTTCTCTTCTCCGATCGATCTACCTCTTTGCCTGAC 472
Query 124 CTCCGAGAATCCAAACGCGAAGAAAAGATGGCGGAATTAAGCCGGAATATCCGTGACATG 183
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 473 CTCCGAGATTCCAAACGCGACGAAAAGATGGCGGAATTAAGCCGGAATATCCGTGACATG 532
Query 184 AAGTCGATTCTCTATGGAAACAGTGAAGCCGAGCCTGTCGCTGAAGCTTGTGCACAGTTG 243
|||||||||||||| || ||||| ||||| |||||||| || ||||||||||||||||||
Sbjct 533 AAGTCGATTCTCTACGGGAACAGCGAAGCAGAGCCTGTGGCAGAAGCTTGTGCACAGTTG 592
Query 244 ACTCAAGAATTCTTTAAAGAGGATACTCTACGTCTCTTGATTACTTGTCTCCCTAAACTT 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACTCAAGAATTCTTTAAAGAGGATACTCTACGTCTCTTGATTACTTGTCTCCCTAAACTT 652
Query 304 AACTTGGAGGCTAGGAAAGATGCTACACAAGTTGTTGCAAATCTACAGAGGCAACAGGTC 363
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 AACTTGGAGACGAGGAAAGATGCTACACAAGTTGTTGCAAATCTACAGAGGCAACAGGTT 712
Query 364 AATTCACGGTTGATTGCATCTGATTATCTT-GAAGCCAACATTGATCTCATGGATGTTTT 422
||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||
Sbjct 713 AATTCACGGTTGATTGCTTCTGATTAT-TTAGAAGCCAACATTGATCTCATGGATGTTTT 771
Query 423 GATTGAAGGCTTCGAGAACACAGACATGGCTTTACACTATGGGGCTATGTTTAGAGAGTG 482
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 772 GATTGAAGGCTTCGAGAACACAGACATGGCTTTACACTATGGTGCTATGTTTAGGGAGTG 831
Query 483 CATCCGTCATCAGATTGTGGCTAAATATGTTTTGGAGTCTGACCACGTGAAGAACTTCTT 542
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 832 TATCCGTCATCAGATTGTGGCTAAATATGTTTTGGAGTCTGACCATGTGAAGAAATTCTT 891
Query 543 CGATTACATACAGCTTCCTAATTTCGACATTGCTGCTGATGCTGCTGCTACTTTTAAGGA 602
||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 892 TGATTACATACAGCTTCCAAATTTCGACATTGCTGCCGATGCTGCTGCTACTTTTAAGGA 951
Query 603 ACTGCTGACAAGGCATAAATCTACTGTTGCCGAGTTTCTCACCAAGAATGAAGACTGGTT 662
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 952 ACTGCTGACAAGGCATAAGTCTACTGTTGCCGAGTTTCTCACCAAGAATGAAGACTGGTT 1011
Query 663 TTTCGCAGACTACAACTCAAAGCTTCTTGAATCAAGTAATTATATAACCAGACGGCAAGC 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 TTTCGCAGACTACAACTCAAAGCTTCTTGAATCAAGTAATTATATAACCAGACGGCAAGC 1071
Query 723 TATTAAGTTGTTGGGTGATATATTACTGGATCGATCAAATTCAGCTGTGATGACGAAATA 782
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1072 TATTAAGTTGTTGGGTGATATATTATTGGATCGATCAAATTCAGCTGTGATGACGAAATA 1131
Query 783 TGTGAGCTCAAGGGATAACTTGAGGATTCTCATGAATCTTCTGAGAGAGTCAAGCAAGAG 842
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1132 TGTGAGCTCGAGGGATAACTTGAGGATTCTCATGAATCTTCTAAGAGAGTCAAGCAAGAG 1191
Query 843 TATCCAAATAGAAGCATTCCATGTCTTCAAGCTGTTTGCAGCGAACCAAAACAAGCCTGC 902
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1192 TATCCAAATAGAAGCATTCCATGTCTTTAAGCTGTTTGCAGCGAACCAAAACAAGCCTGC 1251
Query 903 GGATATAGTCAACATTTTGGTGGCCAACAGAAGCAAGCTTCTGAGATTGTTGGCTGATTT 962
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1252 GGATATAGTCAACATTCTGGTGGCCAACAGAAGCAAGCTTCTGAGATTGTTGGCTGATTT 1311
Query 963 GAAACCAGATAAAGAGGATGAGAGGTTTGAAGCAGACAAAAGTCAGGTTTTGAGAGAAAT 1022
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1312 GAAACCAGACAAAGAGGATGAGAGGTTTGAAGCAGACAAAAGTCAGGTTTTGAGAGAAAT 1371
Query 1023 CGCAGCCCTTGAACCACGAGATCTTGCTTGAACCAACCAACGCAAATCATCCTT 1076
||||||||||||||| ||||||||||||||||||||| || |||| ||||||||
Sbjct 1372 CGCAGCCCTTGAACCTCGAGATCTTGCTTGAACCAACTAATGCAATTCATCCTT 1425
> AT4G17270.1 | Symbols: | Mo25 family protein | chr4:9676127-9678777
FORWARD LENGTH=1520
Length=1520
Score = 1112 bits (602), Expect = 0.0
Identities = 898/1042 (86%), Gaps = 16/1042 (2%)
Strand=Plus/Plus
Query 20 AAATGAAAGGGCTTTTCAAGTCTAAGCCACGCACTCCTGCTGACCTTGTTCGACAAACGC 79
|||||| ||| |||||||| || || || || ||||| ||||| ||||||| || || |
Sbjct 278 AAATGAGAGGTCTTTTCAAATCCAAACCGCGGACTCCCGCTGATATTGTTCGTCAGACTC 337
Query 80 GCGATCTCCTTCTCTACGCCGATCGATCTACCTCTTTGCCTGACCTCCGAGAATCCAAAC 139
|||||||||| ||||||||||||||||| | ||| || |||||||| ||||| |||||||
Sbjct 338 GCGATCTCCTCCTCTACGCCGATCGATCCAACTCCTTCCCTGACCTTCGAGAGTCCAAAC 397
Query 140 GCGAAGAAAAGATGGCGGAATTAAGCCGGAATATCCGTGACATGAAGTCGATTCTCTATG 199
|||| |||||||||| |||| |||| || || || || |||||| |||||| ||||
Sbjct 398 GCGAGGAAAAGATGGTGGAACTAAGTAAGAGCATACGAGATTTGAAGTTGATTCTATATG 457
Query 200 GAAACAGTGAAGCCGAGCCTGTCGCTGAAGCTTGTGCACAGTTGACTCAAGAATTCTTTA 259
|||||||||| || |||||||| |||||||||||||| ||||||||||| || |||||||
Sbjct 458 GAAACAGTGAGGCTGAGCCTGTTGCTGAAGCTTGTGCTCAGTTGACTCAGGAGTTCTTTA 517
Query 260 AAGAGGATACTCTACGTC-TCTTGATTACTTGTCTCCCTAAACTT-AACTTGGAGGCTAG 317
| | |||||||| || | | ||| | |||| ||| ||| || || ||||||||||| ||
Sbjct 518 AGGCTGATACTCTTCGCCGT-TTGCTCACTTCTCTTCCT-AATTTGAACTTGGAGGCGAG 575
Query 318 GAAAGATGCTACACAAGTTGTTGCAAATCTACAGAGGCAACAGGTCAATTCACGGT-TGA 376
|||||||||||||||||||||||||||||| ||||||||||| |||||||||| || | |
Sbjct 576 GAAAGATGCTACACAAGTTGTTGCAAATCTTCAGAGGCAACAAGTCAATTCAC-GTCTTA 634
Query 377 TTGCAT-CTGATTATCTTGAAGCCAACATTGATCTCATGGATGTTT-TGA-TTGAAGGCT 433
|||| | |||||||||||||| ||||||||||||| |||||| ||| | | |||| || |
Sbjct 635 TTGC-TGCTGATTATCTTGAATCCAACATTGATCTTATGGAT-TTTCT-AGTTGATGGGT 691
Query 434 TCGAGAACACAGACATGGCTTTACACTATGGGGCTATGTTTAGAGAGTGCATCCGTCATC 493
| || ||||| || ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 692 TTGAAAACACCGATATGGCGTTACACTATGGTACTATGTTTAGAGAGTGCATCCGTCATC 751
Query 494 AGATTGTGGCTAAATATGTTTTGGAGTCTGACCACGTGAAGAACTTCTTCGATTACATAC 553
||||||| || |||||||||||||| || || ||||||||||| || || | |||||||
Sbjct 752 AGATTGTTGCAAAATATGTTTTGGACTCGGAGCACGTGAAGAAGTTTTTTTACTACATAC 811
Query 554 AGCTTCCTAATTTCGACATTGCTGCTGATGCTGCTGCTACTTTTAAGGAACTGCTGACAA 613
||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 812 AGCTTCCCAATTTCGACATTGCTGCTGATGCTGCTGCAACTTTTAAGGAACTTCTGACAA 871
Query 614 GGCATAAATCTACTGTTGCCGAGTTTCTCACCAAGAATGAAGACTGGTTTTTCGCAGACT 673
|||| || ||||| ||||| |||||||||| |||||||||||||||||||| |||||||
Sbjct 872 GGCACAAGTCTACAGTTGCTGAGTTTCTCATTAAGAATGAAGACTGGTTTTTTGCAGACT 931
Query 674 ACAACTCAAAGCTTCTTGAATCAAGTAATTATATAACCAGACGGCAAGCTATTAAGTTGT 733
|||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||
Sbjct 932 ACAACTCAAAGCTTCTTGAATCAACTAATTATATTACCCGACGGCAAGCTATTAAGTTGT 991
Query 734 TGGGTGATATATTACTGGATCGATCAAATTCAGCTGTGATGACGAAATATGTGAGCTCAA 793
|||| ||||||||| ||||| | |||||||| |||||||||||||| ||||||||||| |
Sbjct 992 TGGGCGATATATTATTGGATAGGTCAAATTCGGCTGTGATGACGAAGTATGTGAGCTCGA 1051
Query 794 GGGATAACTTGAGGATTCTCATGAATCTTCTGAGAGAGTCAAGCAAGAGTATCCAAATAG 853
|||||||||||||||||| ||||||||||| ||||| |||||||||| ||| || ||||
Sbjct 1052 TGGATAACTTGAGGATTCTGATGAATCTTCTCAGAGAATCAAGCAAGACTATTCAGATAG 1111
Query 854 AAGCATTCCATGTCTTCAAGCTGTTTGCAGCGAACCAAAACAAGCCTGCGGATATAGTCA 913
|||| |||||||| ||||||||||||| ||||||||||||||||||| | || || | ||
Sbjct 1112 AAGCTTTCCATGTTTTCAAGCTGTTTGTAGCGAACCAAAACAAGCCTTCAGACATCGCCA 1171
Query 914 ACATTTTGGTGGCCAACAGAAGCAAGCTTCTGAGATTGTTGGCTGATTTGAAACCAGATA 973
||||| ||||||| ||||||| ||||||||||||||||||||||||| | || || || |
Sbjct 1172 ACATTCTGGTGGCAAACAGAAACAAGCTTCTGAGATTGTTGGCTGATATCAAGCCGGACA 1231
Query 974 AAGAGGATGAGAGGTTTGAAGCAGACAAAAG-TCAGGTTTTGAGAGAAATCGCAGCCCTT 1032
||||||| ||||||||||| ||||||||| | ||||||| ||||||| || ||| ||||
Sbjct 1232 AAGAGGACGAGAGGTTTGACGCAGACAAA-GCTCAGGTTGTGAGAGAGATTGCAAACCTT 1290
Query 1033 GAACCA-CGAGATCTTGCTTGA 1053
|| | ||||| |||||||||
Sbjct 1291 -AAGCTGCGAGAGCTTGCTTGA 1311
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 52710572250
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5