BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948687
Length=1380
Score E
Sequences producing significant alignments: (Bits) Value
AT5G44340.1 | Symbols: TUB4 | tubulin beta chain 4 | chr5:17859... 2292 0.0
AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:11182... 1589 0.0
AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042876-804... 1077 0.0
AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:69377... 1051 0.0
AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 | chr5:25184... 1050 0.0
AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 | chr5:25181... 1037 0.0
AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451... 1035 0.0
> AT5G44340.1 | Symbols: TUB4 | tubulin beta chain 4 | chr5:17859195-17861101
REVERSE LENGTH=1689
Length=1689
Score = 2292 bits (1241), Expect = 0.0
Identities = 1323/1364 (97%), Gaps = 0/1364 (0%)
Strand=Plus/Plus
Query 1 GACGAAGAAACCaaaaaaaaaaaaaaTGAGAGAGATCCTTCATATCCAAGGCGGTCAATG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 83 GACGAAGAAACCAAAAAAAAAAAAAATGAGAGAGATCCTTCATATCCAAGGCGGTCAATG 142
Query 61 TGGAAACCAGATCGGAGCAAAGTTCTGGGAAGTGATCTGCGACGAACACGGCATTGATCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 143 TGGAAACCAGATCGGAGCAAAGTTCTGGGAAGTGATCTGCGACGAACACGGCATTGATCA 202
Query 121 CACCGGTCAATACGTCGGCGATTCTCCGTTACAGCTTGAACGTATCGATGTGTATTTCAA 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 203 CACCGGTCAATACGTCGGCGATTCTCCGTTACAGCTTGAACGTATCGATGTCTATTTCAA 262
Query 181 CGAAGCTAGCGGTGGAAAGTACGTTCCTCGTGCTGTTCTTATGGATCTGGAGCCTGGTAC 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 263 CGAAGCTAGCGGTGGAAAGTACGTTCCTCGCGCTGTTCTTATGGATCTGGAGCCTGGTAC 322
Query 241 TATGGATTCTCTCAGATCTGGTCCGTTTGGTCAGATTTTCCGTCCTGATAACTTCGTCTT 300
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 323 CATGGATTCTCTCAGATCTGGTCCGTTCGGTCAGATTTTCCGTCCTGATAACTTCGTCTT 382
Query 301 TGGTCAATCCGGTGCCGGGAATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAGTT 360
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 383 TGGTCAATCTGGTGCCGGAAATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAGTT 442
Query 361 GATTGATTCTGTTCTTGATGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGG 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 GATTGATTCTGTTCTCGATGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGG 502
Query 421 TTTCCAAGTGTGTCATTCATTGGGAGGAGGAACTGGATCTGGAATGGGAACTCTATTGAT 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 503 TTTCCAAGTGTGTCATTCATTGGGAGGAGGAACTGGATCTGGAATGGGAACTCTATTGAT 562
Query 481 TTCTAAGATAAGAGAAGAGTATCCAGATCGTATGATGATGACTTTTTCAGTGTTTCCTTC 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 563 TTCTAAGATAAGAGAAGAGTATCCAGATCGTATGATGATGACTTTCTCAGTGTTTCCTTC 622
Query 541 TCCTAAGGTCTCTGACACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 623 TCCTAAGGTCTCTGACACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCT 682
Query 601 TGTTGAAAACGCTGACGAGTGTATGGTTTTGGATAATGAGGCTCTTTACGATATCTGTTT 660
||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 683 TGTCGAAAACGCTGACGAGTGTATGGTTTTGGACAATGAGGCTCTCTACGATATCTGTTT 742
Query 661 CCGTACCCTCAAGCTTGCTAATCCTACCTTTGGTGATCTTAACCATCTCATCTCTGCTAC 720
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 743 CCGTACCCTCAAGCTCGCTAATCCTACCTTTGGTGATCTTAACCATCTCATCTCTGCTAC 802
Query 721 AATGAGTGGTGTTACGTGCTGTCTTCGTTTCCCTGGTCAGCTTAACTCTGACCTTAGGAA 780
|||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 803 AATGAGTGGTGTCACTTGCTGTCTTCGTTTCCCTGGCCAGCTTAACTCTGACCTTAGGAA 862
Query 781 GCTTGCTGTGAATCTTATCCCGTTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCTCC 840
|| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 863 ACTCGCTGTGAACCTTATCCCATTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCACC 922
Query 841 ATTGACATCGAGAGGATCGCAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCA 900
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 923 ATTGACATCGAGAGGATCACAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCA 982
Query 901 GATGTGGGATGCGAAGAACATGATGTGTGCTGCTGACCCTCGCCATGGACGTTACTTGAC 960
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 983 GATGTGGGATGCAAAGAACATGATGTGTGCTGCTGACCCTCGTCATGGACGTTACTTGAC 1042
Query 961 TGCATCCGCTGTGTTCCGTGGTAAGCTGAGCACGAAAGAGGTTGATGAGCAGATGATGAA 1020
||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||
Sbjct 1043 TGCATCCGCTGTGTTCCGTGGAAAGCTGAGCACCAAAGAGGTTGACGAGCAGATGATGAA 1102
Query 1021 CATTCAGAACAAGAACTCATCGTACTTTGTGGAATGGATCCCGAACAACGTCAAGTCCAG 1080
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1103 CATTCAGAACAAGAACTCATCCTACTTTGTGGAATGGATCCCAAACAACGTCAAGTCCAG 1162
Query 1081 TGTCTGTGATATTGCACCAAAGGGTTTGAAAATGGCATCGACTTTCATTGGTAACTCAAC 1140
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1163 TGTCTGTGATATTGCACCAAAGGGTTTGAAAATGGCGTCTACTTTCATTGGTAACTCAAC 1222
Query 1141 CTCGATCCAGGAGATGTTCAGGCGTGTGAGTGAACAGTTCACAGCTATGTTCAGGAGAAA 1200
||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1223 CTCAATCCAGGAGATGTTTAGGCGTGTGAGCGAACAGTTCACAGCTATGTTCAGGAGAAA 1282
Query 1201 GGCTTTCCTTCATTGGTACACAGGAGAAGGTATGGACGAGATGGAGTTCACCGAAGCAGA 1260
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1283 GGCTTTCCTTCATTGGTACACAGGAGAAGGCATGGACGAGATGGAGTTCACTGAAGCAGA 1342
Query 1261 GAGTAACATGAATGATCTTGTCGCAGAGTACCAACAGTACCAAGATGCTACAGCTGGAGA 1320
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1343 GAGTAACATGAATGATCTTGTCGCAGAGTACCAGCAGTACCAAGATGCTACAGCCGGAGA 1402
Query 1321 AGAGGAGTACGAGGAGGAAGAAGAGGAGTATGAGGCTTAAGATG 1364
|| |||||||||||||||||||||||||| ||| |||||||||
Sbjct 1403 GGAAGAGTACGAGGAGGAAGAAGAGGAGTACGAGACTTAAGATG 1446
> AT4G20890.1 | Symbols: TUB9 | tubulin beta-9 chain | chr4:11182092-11184072
FORWARD LENGTH=1693
Length=1693
Score = 1589 bits (860), Expect = 0.0
Identities = 1174/1328 (88%), Gaps = 12/1328 (1%)
Strand=Plus/Plus
Query 23 aaaaTGAGAGAGATCCTTCATATCCAAGGCGGTCAATGTGGAAACCAGATCGGAGCAAAG 82
||||||||||| || |||||||| ||||| ||||| || ||||||||||||||||| |||
Sbjct 124 AAAATGAGAGAAATTCTTCATATTCAAGGAGGTCAGTGCGGAAACCAGATCGGAGCTAAG 183
Query 83 TTCTGGGAAGTGATCTGCGACGAACACGGCATTGATCACACCGGTCAAT-ACGTCGGCGA 141
||||||||||| || |||| ||| ||||| |||||||| |||||||| | | || |||||
Sbjct 184 TTCTGGGAAGTTATTTGCGGCGAGCACGGTATTGATCAAACCGGTCAGTCATGT-GGCGA 242
Query 142 TTCTCCG-T-TACAGCTTGAACGTATCGATGTGTATTTCAACGAAGCTAGCGGTGG-AAA 198
| | | | ||||||||||| | ||| |||| ||||| |||||||||||||| || |||
Sbjct 243 -T-ACAGATCTACAGCTTGAAAGGATCAATGTCTATTTTAACGAAGCTAGCGGAGGCAAA 300
Query 199 GTACGTTCCTCGTGCTGTTCTTATGGATCTGGAGCCTGGTACTATGGATTCTCTCAGATC 258
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 301 -TACGTTCCTCGTGCTGTTCTTATGGATCTGGAGCCTGGAACTATGGATTCTCTCAGATC 359
Query 259 TGGTCCGTTTGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGTGCCGG 318
||| |||||||||||||||||||| |||||||||||||| |||||||| || ||||| ||
Sbjct 360 TGGGCCGTTTGGTCAGATTTTCCGGCCTGATAACTTCGTTTTTGGTCAGTCTGGTGCTGG 419
Query 319 GAATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAGTTGATTGATTCTGTTCTTGA 378
||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||
Sbjct 420 GAATAACTGGGCGAAAGGTCATTACACGGAGGGAGCTGAGTTGATTGATTCTGTGCTTGA 479
Query 379 TGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGGTTTCCAAGTGTGTCATTC 438
||||||||||||||||||||||||| | ||||||||||||||||| ||||| ||||||||
Sbjct 480 TGTTGTGAGGAAGGAAGCTGAGAACTGTGATTGTCTTCAAGGTTTTCAAGTTTGTCATTC 539
Query 439 ATTGGGAGGAGGAACTGGATCTGGAATGGGAACTC-TATTGATTTCTAAGATAAGAGAAG 497
||||||||||||||||| |||||||||||||| | | || ||||||||||| ||||| |
Sbjct 540 TTTGGGAGGAGGAACTGGTTCTGGAATGGGAACACTTCTT-ATTTCTAAGATTAGAGAGG 598
Query 498 AGTATCCAGATCGTATGATGATGACTTTTTCAGTGTTTCCTTCTCCTAAGGTCTCTGACA 557
| ||||||||||||||||||||||| ||||| || || || ||||||||||||||||| |
Sbjct 599 AATATCCAGATCGTATGATGATGACCTTTTCGGTCTTCCCATCTCCTAAGGTCTCTGATA 658
Query 558 CTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCTTGTTGAAAACGCTGACG 617
| |||||||||||||||||||| ||||| || || || ||||| ||||| || ||||| |
Sbjct 659 CAGTTGTTGAGCCATACAATGCTACTCTTTCCGTTCACCAGCTCGTTGAGAATGCTGATG 718
Query 618 AGTGTATGGTTTTGGATAATGAGGCTCTTTACGATATCTGTTTCCGTACCCTCAAGCTTG 677
| ||||||||||||||||| || ||||||||||||||||||||||||||| | |||||||
Sbjct 719 AATGTATGGTTTTGGATAACGAAGCTCTTTACGATATCTGTTTCCGTACCTTGAAGCTTG 778
Query 678 CTAATCCTACCTTTGGTGATCTTAACCATCTCATCTCTGCTACAATGAGTGGTGTTACGT 737
|||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| |
Sbjct 779 CTAATCCTACATTTGGTGACCTTAACCATCTCATCTCAGCTACAATGAGTGGTGTTACAT 838
Query 738 GCTGTCTTCGTTTCCCTGGTCAGCTTAACTCTGACCTTAGGAAGCTTGCTGTGAATCTTA 797
|||||||||| ||||||||||| || |||||||||||||| || ||||||||||| ||||
Sbjct 839 GCTGTCTTCGGTTCCCTGGTCAACTAAACTCTGACCTTAGAAAACTTGCTGTGAACCTTA 898
Query 798 TCCCGTTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCTCCATTGACATCGAGAGGAT 857
| || |||||| | || |||||||||||||||||||| || || |||||||| |||||||
Sbjct 899 TTCCTTTCCCACGACTCCACTTCTTCATGGTTGGTTTTGCACCTTTGACATCAAGAGGAT 958
Query 858 CGCAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCAGATGTGGGATGCGAAGA 917
| || |||||||||||||||||||| ||||| || || || |||||||||||||| || |
Sbjct 959 CTCAACAATACAGTGCCTTGAGTGTCCCTGAGCTAACTCAACAGATGTGGGATGCCAAAA 1018
Query 918 ACATGATGTGTGCTGCTGACCCTCGCCATGGACGTTACTTGACTGCATCCGCTGTGTTCC 977
||||||||||||| ||||| ||||| ||||| ||||||||||| || || ||||| ||||
Sbjct 1019 ACATGATGTGTGCAGCTGATCCTCGTCATGGTCGTTACTTGACAGCTTCTGCTGTCTTCC 1078
Query 978 GTGGTAAGCTGAGCACGAAAGAGGTTGATGAGCAGATGATGAACATTCAGAACAAGAACT 1037
|||| ||| |||| || |||||||||||||| |||||||||||| | |||||||| ||||
Sbjct 1079 GTGGAAAGATGAGTACCAAAGAGGTTGATGAACAGATGATGAACGTCCAGAACAAAAACT 1138
Query 1038 CATCGTACTTTGTGGAATGGATCCCGAACAACGTCAAGTCCAGTGTCTGTGATATTGCAC 1097
| || |||||||| |||||||| || || ||||| || || || ||||| ||||| || |
Sbjct 1139 CCTCATACTTTGTTGAATGGATTCCAAATAACGTGAAATCAAGCGTCTGCGATATAGCTC 1198
Query 1098 CAAAGGGTTTGAAAATGGCATCGACTTTCATTGGTAACTCAACCTCGATCCAGGAGATGT 1157
| | ||||||||||||||||| ||||||||||| |||||||| || |||||||| ||||
Sbjct 1199 CCACTGGTTTGAAAATGGCATCAACTTTCATTGGAAACTCAACTTCAATCCAGGAAATGT 1258
Query 1158 TCAGGCGTGTGAGTGAACAGTTCACAGCTATGTTCAGGAGAAAGGCTTTCCTTCATTGGT 1217
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1259 TCAGGCGTGTGAGTGAACAGTTCACTGCCATGTTCAGGAGAAAGGCTTTCCTTCATTGGT 1318
Query 1218 ACACAGGAGAAGGTATGGACGAGATGGAGTTCACCGAAGCAGAGAGTAACATGAATGATC 1277
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1319 ACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGAGAGTAACATGAATGATC 1378
Query 1278 TTGTCGCAGAGTACCAACAGTACCAAGATGCTACAG-CTGGAGAAGAGGAGTACGAGGAG 1336
|||| |||||||| || || || ||||||||||||| | || ||||||||||||||||||
Sbjct 1379 TTGTTGCAGAGTATCAGCAATATCAAGATGCTACAGTC-GGTGAAGAGGAGTACGAGGAG 1437
Query 1337 GAAGAAGA 1344
|| |||||
Sbjct 1438 GACGAAGA 1445
> AT5G23860.1 | Symbols: TUB8 | tubulin beta 8 | chr5:8042876-8044819
FORWARD LENGTH=1727
Length=1727
Score = 1077 bits (583), Expect = 0.0
Identities = 1098/1345 (82%), Gaps = 41/1345 (3%)
Strand=Plus/Plus
Query 22 aaaaaTGAGAGAGATCCTTCATATCCAAGGCGGTCAATGTGGAAACCAGATCGGAGCAAA 81
||| ||| ||||||| ||||| || ||||| || ||||| ||||||||||||||||| ||
Sbjct 83 AAAGATGCGAGAGATTCTTCACATACAAGGTGGCCAATGCGGAAACCAGATCGGAGCTAA 142
Query 82 GTTCTGGGAAGTGA-TCTGCGACGAACACGGCATTGA-TCACACCGGTCA-ATACGTCGG 138
|||||||||||| | | |||| ||| ||||| || || || | ||| | |||| ||
Sbjct 143 GTTCTGGGAAGT-AGTTTGCGCCGAGCACGGGATCGATTC-GA-CGGGAAGATACCAAGG 199
Query 139 CGATTCTCCG--TTACAGCTTGAACGTA-TCGATGTGTATTTCAACGAAGCTAGCGGTGG 195
|| || || || || ||||| | || |||| || | ||||||||| || | ||
Sbjct 200 AGA--GAACGATTTGCAACTCGAACG-AGTCAATGTCTACTACAACGAAGCGAGTTGCGG 256
Query 196 AAAG-TACGTTCCTCGTGCTGTTCTTATGGATCTGGAGCCTGGTACTATGGATTCTCTCA 254
||| | ||| || || || || || |||||||| |||||||||||||||||| | |||
Sbjct 257 -AAGATTCGTCCCACGCGCCGTCCTCATGGATCTAGAGCCTGGTACTATGGATAGTGTCA 315
Query 255 GATCTGGTCCGTTTGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGTG 314
|||| ||||||| |||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 316 GATCCGGTCCGTACGGTCAGATCTTCCGTCCTGATAACTTCGTATTTGGTCAATCCGGTG 375
Query 315 CCGGGAATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAG-TTGATTGATTCTGTT 373
|||| || || ||||| ||||| || ||||| |||||||||||| || || ||||| |||
Sbjct 376 CCGGTAACAATTGGGCTAAAGGACACTACACTGAAGGTGCTGAGCTT-ATCGATTCCGTT 434
Query 374 CTTGATGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTT-CAAGGTTTCCAAGTGTG 432
|| |||||||| | |||||||||||||| | || || ||| ||||| |||||||||||
Sbjct 435 CTCGATGTTGTTCGTAAGGAAGCTGAGAATTGTGACTG-CTTGCAAGGATTCCAAGTGTG 493
Query 433 TCATTCATTGGGAGGAGGAACTGGATCTGGAATGGGAAC-TCTATTGATTTCTAAGATAA 491
||| ||||| ||||||||||||||||||||||||||||| | | |||||||| ||||| |
Sbjct 494 TCACTCATTAGGAGGAGGAACTGGATCTGGAATGGGAACGT-TGTTGATTTCAAAGATTA 552
Query 492 GAGAAGAGTATCCAGATCGTATGATGATGACTTTTTCAGTGTTTCCTTCTCCTAAGGTCT 551
| ||||||||||||||| | |||||| |||| ||||| || || || || || || || |
Sbjct 553 GGGAAGAGTATCCAGATAGGATGATGCTGACGTTTTCTGTATTCCCATCACCGAAAGTGT 612
Query 552 CTGACACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCTTGTTGAAAACG 611
| ||||||||||||||||| || ||||||||||||||||| ||||||||||| || || |
Sbjct 613 CAGACACTGTTGTTGAGCCTTATAATGCAACTCTCTCTGTTCATCAGCTTGTGGAGAATG 672
Query 612 CTGACGAGTGTATGGTT-TTGGATAATGAGGCTCTTTACGATATCTGTTTCCGTACCCTC 670
| || |||||||||||| ||| | ||||| ||||| || || || || ||| | || ||
Sbjct 673 CAGATGAGTGTATGGTTCTTG-ACAATGAAGCTCTCTATGACATTTGCTTCAGAACTCTT 731
Query 671 AAGCTTGCTAATCCTACCTTTGGTGATCTT-AACCATCTCATCTCTGCTACAATGAGTGG 729
||||| | | ||| | |||||| || ||| || || ||||||||||| || ||||||||
Sbjct 732 AAGCTCACCACTCCAAGCTTTGGAGA-CTTGAATCACCTCATCTCTGCAACCATGAGTGG 790
Query 730 TGTTACGTGCTGTCTTCGTTTCCCTGGTCAGCTTAACTCTGACCTTAGGAAGCTTGCTGT 789
||| || ||||| ||||||||||| |||||||| ||||||||||| | |||||||| ||
Sbjct 791 TGTCACTTGCTGCCTTCGTTTCCCGGGTCAGCTAAACTCTGACCTGCGCAAGCTTGCAGT 850
Query 790 GAATCTTA-TCCCGTTCCCAAGGCTTCACTTCTTCATGGTTGG-TTTCGCTCCATTGACA 847
|||| ||| |||| ||||| | || ||||||||||||||||| ||| || ||| | |||
Sbjct 851 GAAT-TTAATCCCATTCCCTCGTCTCCACTTCTTCATGGTTGGGTTT-GCACCACTCACA 908
Query 848 TCGAGAGGATCGCAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCAGATGTGG 907
|| | ||||| ||||||||||| ||||| | || ||||| || || || |||||||||
Sbjct 909 TCTCGTGGATCACAGCAATACAGAGCCTTAACCGTCCCTGAGCTCACTCAACAGATGTGG 968
Query 908 GATGCGAAGAACATGATGTGTGCTGCTGACCCTCGCCATGG-ACGTTACTTGACTGCATC 966
||||| ||||| ||||||||||| ||||| || ||||| || | || ||||||| || ||
Sbjct 969 GATGCCAAGAATATGATGTGTGCAGCTGATCCACGCCACGGCAGGT-ACTTGACAGCCTC 1027
Query 967 CGCTGTGTTCCGTGGTAAGCTGAGCACGAAAGAGGTTGATGAGCAGATGATGAACATTCA 1026
|| ||||| | || || ||||||||||||| ||||| || |||||||| ||| ||||
Sbjct 1028 AGCCATGTTCAGAGGCAAAATGAGCACGAAAGAAGTTGACGAACAGATGATCAACGTTCA 1087
Query 1027 GAACAAGAACTCATCGTACTTTGTGGAATGGATCCCGAACAACGTCAAGTCCAGTGTCTG 1086
|||||||||||| || |||||||||||||||||||| |||||||| || || | || ||
Sbjct 1088 GAACAAGAACTCGTCATACTTTGTGGAATGGATCCCAAACAACGTGAAATCAACCGTGTG 1147
Query 1087 TGATATTGCACCAA-AGGGTTTGAAAATGGCATCGACTTTCATTGGTAACTCAACCTCGA 1145
||| ||| |||||| ||| | |||||||||| ||||||||||| || ||||| || ||||
Sbjct 1148 TGACATTCCACCAACAGG-TCTGAAAATGGCTTCGACTTTCATCGGGAACTCGACATCGA 1206
Query 1146 TCCAGGAGATGTTCAGGCGTGTGAGTGAACAGTTCACAGCTATGTTCAGGAGAAAGGCTT 1205
||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| ||||
Sbjct 1207 TCCAGGAGATGTTTAGGCGTGTGAGCGAACAGTTCACAGCGATGTTCAGAAGAAAAGCTT 1266
Query 1206 TCCTT-CATTGGTACACAGGAGAAGGTATGGACGAGATGGAGTTCACCGAAGCAGAGAGT 1264
|| || |||||||||||||| ||||| |||||||||||||||||||| || ||||||||
Sbjct 1267 TC-TTGCATTGGTACACAGGTGAAGGAATGGACGAGATGGAGTTCACAGAGGCAGAGAGC 1325
Query 1265 AACATGAATGATCTTG-TCGCAGAGTACCAACAGTACCAAGATGCTACAGCTG--GAG-A 1320
|||||||||||| ||| | ||||||| |||||||||||||| || || |||| ||| |
Sbjct 1326 AACATGAATGAT-TTGGTATCAGAGTATCAACAGTACCAAGACGCAACGGCTGATGAGGA 1384
Query 1321 AGA-GGAGTACGAGGAGGAAGAAGA 1344
||| || ||| ||| | ||||||||
Sbjct 1385 AGAAGG-GTATGAGTATGAAGAAGA 1408
> AT1G20010.1 | Symbols: TUB5 | tubulin beta-5 chain | chr1:6937795-6940582
REVERSE LENGTH=1689
Length=1689
Score = 1051 bits (569), Expect = 0.0
Identities = 1100/1353 (81%), Gaps = 49/1353 (4%)
Strand=Plus/Plus
Query 25 aaTGAGAGAGATCCTTCATATCCAAGGCGGTCAATGTGGAAACCAGATCGGAGCAAAGTT 84
|||||||||||||||||| || ||||| |||||||| || |||||||| || | |||||
Sbjct 101 AATGAGAGAGATCCTTCACATTCAAGGTGGTCAATGCGGTAACCAGATTGGTTCCAAGTT 160
Query 85 CTGGGAAGTGATCTGCGACGAACACGGCATTGA-TCACACCGGTCAATAC-GTCGGCGAT 142
||||||||| ||||||||||| |||||||| || || |||||| | ||| || || ||
Sbjct 161 CTGGGAAGTCATCTGCGACGAGCACGGCATCGATTC-CACCGGACGTTACAGT-GGAGAC 218
Query 143 TCT-CCG-T-TACAGCTTGAACGTATCGATGTGTATTTCAACGAAGCTAGC-GGTGGAAA 198
|| | | | | ||||||||||||||| |||| |||| ||| |||||| | ||||| ||
Sbjct 219 ACTGCAGATCTCCAGCTTGAACGTATCAATGTCTATTACAATGAAGCT-TCAGGTGG-AA 276
Query 199 G-TACGTTCCTCGTGCTGTTCTTATGGATCTGGAGCCTGGTACTATGGATTCTCTCAGAT 257
| ||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||
Sbjct 277 GATACGTTCCTCGTGCTGTTCTTATGGATCTTGAGCCTGGTACTATGGATAGTATCAGAT 336
Query 258 CTGGTCCGTTTGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGTGCCG 317
| || |||||||||||||| ||||||||||||||||| ||||||||||| || ||||| |
Sbjct 337 CCGGACCGTTTGGTCAGATCTTCCGTCCTGATAACTTTGTCTTTGGTCAGTCTGGTGCTG 396
Query 318 GGAATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAG-TTGATTGATTCTGTTCTT 376
| ||||| ||||| |||||||||||||| ||||||||||| || |||||| ||||||||
Sbjct 397 GTAATAATTGGGCTAAAGGTCATTACACTGAAGGTGCTGAACTT-ATTGATGCTGTTCTT 455
Query 377 GATGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGG-TTTCCAAGTGTGTCA 435
|||||||| | || |||||||||||| ||||||| |||||||| |||| | ||||| ||
Sbjct 456 GATGTTGTTCGTAAAGAAGCTGAGAACTGCGATTGCCTTCAAGGGTTTC-AGGTGTGCCA 514
Query 436 TTCATTGGGAGGAGGAACTGGATCTGGAATGGGAACTCTATTGATTTCTAAGATAAGAGA 495
||| ||||||||||| || || || ||||||||||| |||||||| || ||||| ||||
Sbjct 515 TTCGTTGGGAGGAGGCACAGGTTCAGGAATGGGAACACTATTGATATCGAAGATCCGAGA 574
Query 496 AGAGTATCCAGATC-GTATGATGATGACTTTTTCAGTGTTTCCT-TCTCCTAAGGTCTCT 553
||||||||||| | | |||||| | ||||| || || ||||| |||||||| ||||||
Sbjct 575 GGAGTATCCAGA-CAGAATGATGCTCACTTTCTCTGT-TTTCCCATCTCCTAAAGTCTCT 632
Query 554 GACACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCTTGTTGAAAACGCT 613
||||| || |||||||| |||||||||||||||||||| ||||||||||| || ||||||
Sbjct 633 GACACAGTCGTTGAGCCTTACAATGCAACTCTCTCTGTCCATCAGCTTGTAGAGAACGCT 692
Query 614 GACGAGTGTATGGTTTTGGATAATGAGGCTCTTTACGATATCTGTTTCCGTACCCTCAAG 673
|| || || ||||| | || ||||| ||||| ||||||||||| ||||||||||||||
Sbjct 693 GATGAATGCATGGTCCTCGACAATGAAGCTCTCTACGATATCTGCTTCCGTACCCTCAAA 752
Query 674 CTT-GCTAATCCTACCTTTGGTGATCTT-AACCATCTCATCTCTGCTACAATGAGTGGTG 731
|| || | ||||| |||||| || ||| |||||| | ||||| || |||||||| ||||
Sbjct 753 CTCAGC-ACTCCTAGCTTTGGAGA-CTTGAACCATTTGATCTCCGCAACAATGAGCGGTG 810
Query 732 TTACGTGCTGTCTTC-GTTTCCCTGGTCAGCTTAACTCTGACCTTAGGAAGCTTGCTGTG 790
| || |||| ||| | ||||| || || || ||||||||||| ||||| || || |||
Sbjct 811 TGACTTGCTC-CTTAAGGTTCCCCGGACAACTAAACTCTGACCTCAGGAAACTCGCGGTG 869
Query 791 AATCTTATCCCGTTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCTCCATTGACATCG 850
|| || ||||| ||||| | || || ||||||||||| ||||| || || | || ||
Sbjct 870 AACCTAATCCCATTCCCTCGTCTCCATTTCTTCATGGTGGGTTTTGCGCCCCTCACTTCC 929
Query 851 AGAGGATCGCAGCAATACAG-TGC-CTTGAGTGTTCCTGAACTGACCCAGCAGATGTGGG 908
| || ||||| ||||||| | | || | |||||||| ||||| || || |||||||
Sbjct 930 CGTGGCTCGCAACAATACATCT-CACTC-ACCGTTCCTGAGCTGACTCAACAAATGTGGG 987
Query 909 A-TGCGAAGAACATGATGTGTGCTGCTGACCCTCGCCATGGACGTTACTTGACTGCATCC 967
| | | || |||||||||||||| ||||| || || || ||||||||| | || || ||
Sbjct 988 ACTCCAAA-AACATGATGTGTGCAGCTGATCCACGTCACGGACGTTACCTCACAGCCTCT 1046
Query 968 GCTGTGTTCCGTGGTA-AGCTGAGCACGAAAGAGGTTGATGAGCAGATGATGAACATTCA 1026
||| | ||| | || | || ||||||| ||||| || || ||||| || | ||||| ||
Sbjct 1047 GCTATTTTCAGAGG-ACAGATGAGCACAAAAGAAGTCGACGAGCAAATCCTAAACATACA 1105
Query 1027 GAACAAGAACTCATCGTACTTTGTGGAATGGATCCCGAACAACGTCAAGTCCAGTGTCTG 1086
|||||||||||| || ||||| || || |||||||| |||||||| || ||||| || ||
Sbjct 1106 GAACAAGAACTCGTCTTACTTCGTTGAGTGGATCCCAAACAACGTGAAATCCAGCGTTTG 1165
Query 1087 TGATATTGCACCAAAGGGTTTGAAAATGGCATCGAC-TTTCATTGGTAACTCAACCTCGA 1145
|||||| |||||||||| | |||||||| |||| ||| | |||||||| || ||||
Sbjct 1166 TGATATCCCACCAAAGGGGCTCAAAATGGCGGCGACGTTTG-TGGGTAACTCGACGTCGA 1224
Query 1146 TCCAGGAGATGTTCAGGCGTGTGAGTGAACAGTTCACAGCTATGTTCAGGAG-AAAG-GC 1203
| || || ||||||||| | |||||||| |||||||| |||||||| ||| | |||| |
Sbjct 1225 TTCAAGAAATGTTCAGGAGAGTGAGTGAGCAGTTCACGGCTATGTTTAGGCGTAAAGCG- 1283
Query 1204 TTTCCTTCATTGGTACACAGGAGAAGGTATGGACGAGATGGAGTTCACCGAAGCAGAGAG 1263
|||| | |||||||||||||||||||| |||||||| |||||||| || ||||| |||||
Sbjct 1284 TTTC-TGCATTGGTACACAGGAGAAGGAATGGACGAAATGGAGTTTACGGAAGCTGAGAG 1342
Query 1264 TAACATGAATGATCTTG-TCGCAGAGTACCAACAGTACCAAGATGCTACAGCTG--GAG- 1319
|| ||||||||| ||| |||| || ||||||||||||||||||||||| |||| |||
Sbjct 1343 CAATATGAATGAT-TTGGTCGCTGAATACCAACAGTACCAAGATGCTACTGCTGATGAGG 1401
Query 1320 AAGAG-GAGTACGA-G--GAGGAAGAAGAGGAG 1348
||| | ||||| || | || ||||||||||||
Sbjct 1402 AAG-GTGAGTATGATGTTGAAGAAGAAGAGGAG 1433
> AT5G62700.1 | Symbols: TUB3 | tubulin beta chain 3 | chr5:25184397-25186711
FORWARD LENGTH=1742
Length=1742
Score = 1050 bits (568), Expect = 0.0
Identities = 1093/1345 (81%), Gaps = 41/1345 (3%)
Strand=Plus/Plus
Query 22 aaaaaTGAGAGAGATCCTTCATATCCAAGGCGGTCAATGTGGAAACCAGATCGGAGCAAA 81
||| ||| | ||||| ||||| ||||| || |||||||| || |||||||||||||| ||
Sbjct 101 AAAGATGCGTGAGATTCTTCACATCCAGGGTGGTCAATGCGGTAACCAGATCGGAGCCAA 160
Query 82 GTTCTGGGAAGTGATCTGCGACGAACACGGCATTGAT-CACACCGGTCAA--TACGTCGG 138
||||||||||||| | |||| ||| |||||||| ||| || ||||| || ||| |||
Sbjct 161 GTTCTGGGAAGTGGTTTGCGCCGAGCACGGCATCGATCCA-ACCGG--AAGGTACACCGG 217
Query 139 CGATTCTCCG-T-TACAGCTTGAACGTATCGATGTGTATTTCAACGAAGCTAGCGGTGGA 196
|| ||| | | | || ||||| || ||| | || || | ||| ||||| || | ||
Sbjct 218 AGA--CTCAGATCTGCAACTTGAGCGCATCAACGTTTACTACAATGAAGCGAGTTGCGG- 274
Query 197 AAG-TACGTTCCTCGTGCTGTTCTTATGGATCTGGAGCCTGGTACTATGGATTCTCTCAG 255
|| | |||||||||||| || || |||||| |||||||||| ||||||||| ||||||
Sbjct 275 TAGATTCGTTCCTCGTGCAGTGCTCATGGATTTGGAGCCTGGGACTATGGATAGTCTCAG 334
Query 256 ATCTGGTCCGTTTGGTCAGA-TTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGTG 314
|||||| |||| ||||||| ||| || |||||||||||||||||||||||||||||||
Sbjct 335 ATCTGGACCGTACGGTCAGACCTTT-CGACCTGATAACTTCGTCTTTGGTCAATCCGGTG 393
Query 315 CCGGG-AATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAGTTGATTGATTCTGTT 373
| ||| || |||||||| || || || ||||| ||||| ||||| | || ||||| |||
Sbjct 394 C-GGGTAACAACTGGGCCAAGGGACACTACACTGAAGGAGCTGAACTAATCGATTCCGTT 452
Query 374 CTTGATGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGGTTTCCAAGTGTGT 433
|| |||||||| | ||||||||||||||| | || || || ||||| ||||| || |||
Sbjct 453 CTCGATGTTGTTCGTAAGGAAGCTGAGAACTGTGACTGCCTCCAAGGGTTCCAGGTTTGT 512
Query 434 CATTCATTGGGAGGAGGAACTGGATCTGGAATGGGAAC-TCTATTGATTTCTAAGATAAG 492
|| |||||||||||||||||||||||||| |||||||| | | ||||| |||||||| |
Sbjct 513 CACTCATTGGGAGGAGGAACTGGATCTGGTATGGGAACAT-TGTTGATCTCTAAGATCCG 571
Query 493 AGAAGAGTATCCAGATCGTATGATGATGACTTTTTCAGTGTTTCCTTCTCCTAAGGTCTC 552
|||||||| |||||||| |||||| | || || || ||||| ||||| || ||||| ||
Sbjct 572 TGAAGAGTACCCAGATCGCATGATGCTTACCTTCTCGGTGTTCCCTTCACCAAAGGTTTC 631
Query 553 TGACACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCTTGTTGAAAACGC 612
||| ||||| || ||||| ||||| || ||| | ||||| |||||||||||||| || ||
Sbjct 632 TGATACTGTGGTGGAGCCTTACAACGCTACTTTATCTGTTCATCAGCTTGTTGAGAATGC 691
Query 613 TGACGAGTGTATGGTT-TTGGATAATGAGGCTCTT-TACGATATCTGTTTCCGTACCCTC 670
||| ||||| |||||| ||| |||| ||||| ||| |||||||| || ||| | || |||
Sbjct 692 TGATGAGTGCATGGTTCTTG-ATAACGAGGC-CTTGTACGATATTTGCTTCAGGACTCTC 749
Query 671 AAGCTTGCTAATCCTACCTTTGGTGATCTT-AACCATCTCATCTCTGCTACAATGAGTGG 729
|| || ||| || | |||||||||| || |||||| | || ||||| || ||| |||
Sbjct 750 AAACTCACTACCCCCAGCTTTGGTGAT-TTGAACCATTTGATATCTGCCACTATGTCTGG 808
Query 730 TGTTACGTGCTGTCTTCGTTTCCCTGGTCAGCTTAACTCTGACCTTAGGAAGCTTGCTGT 789
||| || |||||||| | ||||||||||| || ||||||||||| | |||||||||||
Sbjct 809 TGTGACTTGCTGTCTGAGGTTCCCTGGTCAACTCAACTCTGACCTCCGTAAGCTTGCTGT 868
Query 790 GAATCTTATCCCGTTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCTCCAT-TGACAT 848
|||||| ||||| ||||| | ||||||||||||||||||||||| ||||| | | || |
Sbjct 869 GAATCTCATCCCATTCCCTCGTCTTCACTTCTTCATGGTTGGTTTTGCTCC-TCTCACCT 927
Query 849 CGAGAGGATCGCAGCAATACAG-TGCCTTGAGTGTTCCTGAACTGACCCAGCAGATGTGG 907
| ||||| || ||||| ||| | | ||| | || ||||| || |||||||| ||||||
Sbjct 928 CAAGAGGTTCACAGCAGTACCGCTCCCTC-ACAGTCCCTGAGCTCACCCAGCAAATGTGG 986
Query 908 GA-TGCGAAGAACATGATGTGTGCTGCTGACCCTCGCCATGGACGTTACTTGACTGCATC 966
|| | | |||||||||||||||||||| ||||| | || ||||| ||| | || || ||
Sbjct 987 GACTCC-AAGAACATGATGTGTGCTGCAGACCCAAGGCACGGACGCTACCTCACAGCCTC 1045
Query 967 CGCTGTGTTCCGTGGTAAGCTGAGCACGAAAG-AGGTTGATGAGCAGATGATGAACATTC 1025
|| |||||||||| ||| ||||||| |||| | ||||| ||||||||| |||| |||
Sbjct 1046 TGCCATGTTCCGTGGCAAGATGAGCAC-AAAGGAAGTTGACGAGCAGATGCTGAATGTTC 1104
Query 1026 AGAACAAGAACTCATCGTACTTTGTGGAATGGATCCCGAACAACGTCAAGTCCAGTGTCT 1085
||||||||||||| || ||||||||||| |||||||| |||||||| || || | ||||
Sbjct 1105 AGAACAAGAACTCGTCCTACTTTGTGGAGTGGATCCCCAACAACGTGAAATCAACAGTCT 1164
Query 1086 GTGATATTGCACCAAAGGGTTTGAAAATGGCATCGACTTTCATTGGTAACTCAACCTCGA 1145
||||||| |||| | ||| |||| ||||| || ||||||||||| |||||||| ||||
Sbjct 1165 GTGATATCCCACCTACTGGTCTGAAGATGGCTTCCACTTTCATTGGAAACTCAACATCGA 1224
Query 1146 TCCAGGAGATGTTCAGGCGTGTGAGTGAACAGTTCACAGCTATGTTCAGGAGAAAGGCTT 1205
|||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||
Sbjct 1225 TCCAAGAGATGTTCAGGCGAGTGAGTGAGCAGTTCACAGCTATGTTCAGGAGGAAGGCTT 1284
Query 1206 TCCTT-CATTGGTACACAGGAGAAGGTATGGACGAGATGGAGTTCACCGAAGCAGAGAGT 1264
|| || |||||||||||||| || || |||||||||||||||||||| |||||||||||
Sbjct 1285 TC-TTGCATTGGTACACAGGTGAGGGAATGGACGAGATGGAGTTCACAGAAGCAGAGAGC 1343
Query 1265 AACATGAATGATCTTGTCG-CAGAGTACCAACAGTACCAAGATGCTACAGCTGGA-GAAG 1322
|||||||| |||||||| | |||||||||| || ||||||||||| || |||| | ||||
Sbjct 1344 AACATGAACGATCTTGT-GTCAGAGTACCAGCAATACCAAGATGCAACGGCTG-ATGAAG 1401
Query 1323 A-GGAG--TACGAGGAGGAAGAAGA 1344
| || | |||||||| || |||||
Sbjct 1402 AAGGTGACTACGAGGATGAGGAAGA 1426
> AT5G62690.1 | Symbols: TUB2 | tubulin beta chain 2 | chr5:25181415-25183729
FORWARD LENGTH=1726
Length=1726
Score = 1037 bits (561), Expect = 0.0
Identities = 1083/1334 (81%), Gaps = 39/1334 (3%)
Strand=Plus/Plus
Query 32 GAGATCCTTCATATCCAAGGCGGTCAATGTGGAAACCAGATCGGAGCAAAGTTCTGGGAA 91
||||| ||||| ||||| || |||||||| || ||||||||||| || ||||||||||||
Sbjct 152 GAGATTCTTCACATCCAGGGTGGTCAATGCGGTAACCAGATCGGCGCCAAGTTCTGGGAA 211
Query 92 GTGATCTGCGACGAACACGGCATTGAT-CACACCGGTCAA--TACGTCGGCGATTCTCCG 148
||| | |||| ||| |||||||| ||| || ||||| || ||| ||| || ||| |
Sbjct 212 GTGGTTTGCGCCGAGCACGGCATCGATCCA-ACCGG--AAGGTACACCGGAGA--CTCAG 266
Query 149 -T-TACAGCTTGAACGTATCGATGTGTATTTCAACGAAGCTAGCGGTGGAAAG-TACGTT 205
| | || ||||| || ||| | || || | ||| ||||| || | || || | ||||
Sbjct 267 ATCTGCAACTTGAGCGCATCAACGTTTACTACAATGAAGCGAGTTGCGG-TAGATTCGTT 325
Query 206 CCTCGTGCTGTTCTTATGGATCTGGAGCCTGGTACTATGGATTCTCTCAGATCTGGTCCG 265
|||||||| || || |||||| |||||||||| ||||||||| |||||||||||| |||
Sbjct 326 CCTCGTGCAGTGCTCATGGATTTGGAGCCTGGGACTATGGATAGTCTCAGATCTGGACCG 385
Query 266 TTTGGTCAGA-TTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGTGCCGGGAATAA 324
| ||||||| ||| || |||||||||||||||||||| ||||||||||| || || ||
Sbjct 386 TACGGTCAGACCTTT-CGACCTGATAACTTCGTCTTTGGCCAATCCGGTGCTGGTAACAA 444
Query 325 CTGGGCGAAAGGTCATTACACCGAAGGTGCTGAGTTGATTGATTCTGTTCTTGATGTTGT 384
|||||| || || || ||||| ||||| ||||| | || ||||| ||||| ||||||||
Sbjct 445 CTGGGCCAAGGGACACTACACGGAAGGAGCTGAACTAATCGATTCCGTTCTCGATGTTGT 504
Query 385 GAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGGTTTCCAAGTGTGTCATTCATTGGG 444
| ||||||||||||||| | || ||||| ||||| ||||| || ||||| || |||||
Sbjct 505 TCGTAAGGAAGCTGAGAACTGTGACTGTCTCCAAGGGTTCCAGGTTTGTCACTCGTTGGG 564
Query 445 AGGAGGAACTGGATCTGGAATGGGAAC-TCTATTGATTTCTAAGATAAGAGAAGAGTATC 503
|||||||||||||||||| |||||||| | | ||||| |||||||| | |||||||| |
Sbjct 565 AGGAGGAACTGGATCTGGTATGGGAACAT-TGTTGATCTCTAAGATCCGTGAAGAGTACC 623
Query 504 CAGATCGTATGATGATGACTTTTTCAGTGTTTCCTTCTCCTAAGGTCTCTGACACTGTTG 563
||||||| |||||| | || || || ||||| ||||| || ||||| ||||| ||||| |
Sbjct 624 CAGATCGCATGATGCTTACCTTCTCGGTGTTCCCTTCACCAAAGGTTTCTGATACTGTGG 683
Query 564 TTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCTTGTTGAAAACGCTGACGAGTGTA 623
||||||| ||||| || ||||| ||||| |||||||||||||| || ||||| ||||| |
Sbjct 684 TTGAGCCTTACAACGCTACTCTGTCTGTCCATCAGCTTGTTGAGAATGCTGATGAGTGCA 743
Query 624 TGGTT-TTGGATAATGAGGCTCTT-TACGATATCTGTTTCCGTACCCTCAAGCTTGCTAA 681
||||| || ||||||||||| ||| |||||||| || ||| | || ||||| || |||
Sbjct 744 TGGTTCTT-GATAATGAGGC-CTTGTACGATATTTGCTTCAGGACTCTCAAACTCACTAC 801
Query 682 TCCTACCTTTGGTGATCTT-AACCATC-TCATCTCTGCTACAATGAGTGGTGTTACGTGC 739
|| | |||||||||| || ||||| | | || |||||||| ||| |||||| || |||
Sbjct 802 CCCCAGCTTTGGTGAT-TTGAACCA-CTTGATTTCTGCTACTATGTCTGGTGTGACTTGC 859
Query 740 TGTCTTCGTTTCCCTGGTCAGCTTAACTCTGACCTTAGGAAGCTTGCTGTGAATCTTATC 799
||||| | ||||||||||| || ||||||||||| | ||||||||||||||||| |||
Sbjct 860 TGTCTGAGGTTCCCTGGTCAACTCAACTCTGACCTCCGAAAGCTTGCTGTGAATCTCATC 919
Query 800 CCGTTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCTCCAT-TGACATCGAGAGGATC 858
|| ||||| | ||||||||||||||||| ||||| ||||| | | || || ||||| ||
Sbjct 920 CCATTCCCCCGTCTTCACTTCTTCATGGTGGGTTTTGCTCC-TCTCACCTCAAGAGGTTC 978
Query 859 GCAGCAATACAGTGCCTTGAGTGTTCCTGAACTGACCCAGCAGATGTGGGA-TGCGAAGA 917
||||| ||| || || | | || ||||| || |||||||| |||||||| | | ||||
Sbjct 979 TCAGCAGTACCGTTCCCTCACAGTCCCTGAGCTCACCCAGCAAATGTGGGACT-CCAAGA 1037
Query 918 ACATGATGTGTGCTGCTGACCCTCGCCATGGACGTTACTTGACTGCATCCGCTGTGTTCC 977
|||||||||||||||| ||||| | || ||||| ||| | || || || || ||||||
Sbjct 1038 ACATGATGTGTGCTGCAGACCCAAGGCACGGACGCTACCTCACAGCCTCTGCCATGTTCC 1097
Query 978 GTGGTAAGCTGAGCACGAAA-GAGGTTGATGAGCAGATGATGAACATTCAGAACAAGAAC 1036
|||| ||| ||||||| ||| || ||||| ||||||||| |||| | ||||||||||||
Sbjct 1098 GTGGCAAGATGAGCAC-AAAGGAAGTTGACGAGCAGATGCTGAATGTGCAGAACAAGAAC 1156
Query 1037 TCATCGTACTTTGTGGAATGGATCCCGAACAACGTCAAGTCCAGTGTCTGTGATATTGCA 1096
|| || ||||||||||| |||||||| |||||||| || || | |||||||| || ||
Sbjct 1157 TCGTCCTACTTTGTGGAGTGGATCCCCAACAACGTGAAATCGACAGTCTGTGACATCCCA 1216
Query 1097 CCAAAGGGTTTGAAAATGGCATCGACTTTCATTGGTAACTCAACCTCGATCCAGGAGATG 1156
|| | ||| |||| |||||||| ||||||||||| |||||||| || ||||| ||||||
Sbjct 1217 CCTACTGGTCTGAAGATGGCATCAACTTTCATTGGAAACTCAACATCAATCCAAGAGATG 1276
Query 1157 TTCAGGCGTGTGAGTGAACAGTTCACAGCTATGTTCAGGAGAAAGGCTTTCCTT-CATTG 1215
|||||||| |||||||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct 1277 TTCAGGCGAGTGAGTGAGCAGTTCACAGCTATGTTCAGGAGAAAGGCTTTC-TTGCATTG 1335
Query 1216 GTACACAGGAGAAGGTATGGACGAGATGGAGTTCACCGAAGCAGAGAGTAACATGAATGA 1275
||||||||| || || |||||||||||||| ||||| ||||| ||||| |||||||| ||
Sbjct 1336 GTACACAGGTGAGGGAATGGACGAGATGGAATTCACAGAAGCGGAGAGCAACATGAACGA 1395
Query 1276 TCTTGTCG-CAGAGTACCAACAGTACCAAGATGCTACAGCTGGA-GAAGA-GGAG--TAC 1330
|||||| | |||||||||| || ||||||||||| || || ||| ||||| || | |||
Sbjct 1396 TCTTGT-GTCAGAGTACCAGCAATACCAAGATGCAACTGC-GGATGAAGAAGGTGACTAC 1453
Query 1331 GAGGAGGAAGAAGA 1344
||||| || |||||
Sbjct 1454 GAGGATGAGGAAGA 1467
> AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451141-28453640
REVERSE LENGTH=1619
Length=1619
Score = 1035 bits (560), Expect = 0.0
Identities = 1093/1347 (81%), Gaps = 50/1347 (4%)
Strand=Plus/Plus
Query 26 ATGAGAGAGATCCTTCATATCCAAGGCGGTCAATGTGGAAACCAGATCGG-AGCAAAGTT 84
|||||||| ||||| || |||||||||| ||||| || ||||| ||||| |||| ||
Sbjct 39 ATGAGAGAAATCCTCCACGTCCAAGGCGGCCAATGCGGTAACCAAATCGGTTCCAAA-TT 97
Query 85 CTGGGAAGTGATCTGCGACGAACACGGCATTGATCACACCGGTCAATACGTCGGCGATT- 143
||||||||| |||||||||||||||||| |||||| |||||| | ||| ||| ||||
Sbjct 98 CTGGGAAGTTATCTGCGACGAACACGGCGTTGATCCCACCGGACGTTACAACGGTGATTC 157
Query 144 CTCCG-T-TACAGCTTGAACGTATCGATGTGTATTTCAACGAAGCTAGC-GGTGGAAAG- 199
| ||| | | ||||| ||||||||| |||| |||| ||| |||||| | ||||| |
Sbjct 158 CGCCGATCTTCAGCTCGAACGTATCAATGTTTATTACAATGAAGCT-TCTGGTGG-TCGT 215
Query 200 TACGTTCCTCGTGCTGTTCTTATGGATCTGGAGCCTGGTACTATGGATTCTCTCAGATCT 259
|||||||||||||||||||| |||||||| |||||||||||||||||| | ||||||||
Sbjct 216 TACGTTCCTCGTGCTGTTCTCATGGATCTCGAGCCTGGTACTATGGATAGTATCAGATCT 275
Query 260 GGTCCGTTTGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGTGCCGGG 319
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 276 GGTCCCTACGGTCAGATTTTCCGTCCTGATAACTTCGTCTTTGGTCAATCCGGTGCCGGA 335
Query 320 AATAACTGGGCGAAAGGTCATTACACCGAAGGTGCTGAG-TTGATTGATTCTGTTCTTGA 378
||||| ||||||||||||||||| || ||||||||||| || |||||| ||||||| ||
Sbjct 336 AATAATTGGGCGAAAGGTCATTATACTGAAGGTGCTGAACTT-ATTGATGCTGTTCTCGA 394
Query 379 TGTTGTGAGGAAGGAAGCTGAGAACAGCGATTGTCTTCAAGG-TTTCCAAGTGTGTCA-T 436
|||||| | ||||||||||||||| | ||||| |||||||| |||| |||| ||||| |
Sbjct 395 TGTTGTTCGTAAGGAAGCTGAGAACTGTGATTGCCTTCAAGGGTTTC-AAGTATGTCACT 453
Query 437 -TCATTGGGAGGAGGAACTGGATCTGGAATGGGAACTCTATTGATTTCTAAGATAAGAGA 495
|| |||| |||||| || || || |||||||||||||| ||||| || ||||| | ||
Sbjct 454 CTC-TTGG-AGGAGGCACGGGTTCAGGAATGGGAACTCTCTTGATATCAAAGATCCGTGA 511
Query 496 AGAGTATCCAGATC-GTATGATGATGACTTTTTCAGTGTTTCCT-TCTCCTAAGGTCTCT 553
|| || ||||| | | |||||| | || || || || ||||| ||||| ||||||||
Sbjct 512 GGAATACCCAGA-CAGAATGATGCTCACATTCTCTGT-TTTCCCATCTCCAAAGGTCTCA 569
Query 554 GACACTGTTGTTGAGCCATACAATGCAACTCTCTCTGTGCATCAGCTTGTTGAAAACGCT 613
||||| || |||||||| ||||||||||||||||| || || || ||||| || || |||
Sbjct 570 GACACAGTCGTTGAGCCGTACAATGCAACTCTCTCAGTCCACCAACTTGTAGAGAATGCT 629
Query 614 GACGAGTGTATGGTTTTGGATAATGAGGCTCTTTACGATATCTGTTTCCGTACCCTCAAG 673
|| || || ||||| | || || || ||||||||||||||||||||||| || |||||
Sbjct 630 GATGAATGCATGGTCCTCGACAACGAAGCTCTTTACGATATCTGTTTCCGCACTCTCAAA 689
Query 674 CTT-GCTAATCCTACCTTTGGTGATCTT-AACCATCTC-ATCTCTGCTACAATGAGTGGT 730
|| || | ||||| |||||| || ||| ||||| || ||||| || || |||||||||
Sbjct 690 CTCAGC-ACTCCTAGCTTTGGAGA-CTTGAACCA-CTTGATCTCCGCAACTATGAGTGGT 746
Query 731 GTTACGTGCTGTCTTC-GTTTCCCTGGTCAGCTTAACTCTGACCTTAGGAAGCTTGCTGT 789
|| || |||| | || | |||||||| || || ||||||||||||||||| || || ||
Sbjct 747 GTGACTTGCTCT-TTAAGATTCCCTGGACAACTCAACTCTGACCTTAGGAAACTCGCCGT 805
Query 790 GAATCTTATCCCGTTCCCAAGGCTTCACTTCTTCATGGTTGGTTTCGCTCCAT-TGACAT 848
||| |||||||| ||||| | || || |||||||||||||||||||| || | | || |
Sbjct 806 GAACCTTATCCCATTCCCTCGTCTACATTTCTTCATGGTTGGTTTCGCCCC-TCTCACTT 864
Query 849 CGAGAGGATCGCAGCAATACAGTGC-CT-TGAGTGTTCCTGAACTGACCCAGCAGATGTG 906
| | || || || || |||| | | || | | || || || ||||| ||||| |||||
Sbjct 865 CCCGTGGCTCTCAACAGTACA-T-CTCTCTCACAGTCCCGGAGCTGACACAGCAAATGTG 922
Query 907 GGATGCGAAGAACATGATGTGTGCTGCTGACCCTCGCCATGGACGTTACTTGACTGCATC 966
||| || ||||||||||||||||| ||||| || ||||| ||||||||| | || || ||
Sbjct 923 GGACGCTAAGAACATGATGTGTGCAGCTGATCCACGCCACGGACGTTACCTCACAGCTTC 982
Query 967 CGCTGTGTTCCGTGGTAAGCTGAGCACGAAAG-AGGTTGATGAGCAGATGATGAACAT-T 1024
|| ||||||| || || ||||||| |||| | || || || ||||| | || || |
Sbjct 983 AGCCATGTTCCGAGGAAAAATGAGCAC-AAAGGAAGTGGACGAACAGATCCT-AA-ATGT 1039
Query 1025 C-AGAACAAGAACTCATCGTACTTTGTGGAATGGATCCCGAACAACGTCAAGTCCAGTGT 1083
| |||||||||||||||| |||||||| ||||||||||| ||||| || |||||||| ||
Sbjct 1040 CCAGAACAAGAACTCATCCTACTTTGTTGAATGGATCCCAAACAATGTGAAGTCCAGCGT 1099
Query 1084 CTGTGATATTGCACCAAAGGGTTTGAAAATGGCATCGAC-TTTCATTGGTAACTCAACCT 1142
||| || ||| |||||| || | |||||||| || || ||| | || ||||| || |
Sbjct 1100 CTGCGACATTCCACCAACTGGAATCAAAATGGCTTCCACGTTTG-TCGGAAACTCGACTT 1158
Query 1143 CGATCCAGGAGATGTTCAGGCGTGTGAGTGAACAGTTCACAGCTATGTTCAGGAG-AAAG 1201
|||||||||| ||||||||| | || || ||||||||||| |||||||||||| | ||||
Sbjct 1159 CGATCCAGGAAATGTTCAGGAGAGTAAGCGAACAGTTCACGGCTATGTTCAGGCGTAAAG 1218
Query 1202 GCTTTCCTT-CATTGGTACACAGGAGAAGGTATGGACGAGATGGAGTTCACCGAAGCAGA 1260
||||| || |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1219 -CTTTC-TTGCATTGGTACACAGGAGAAGGAATGGACGAGATGGAGTTCACTGAAGCAGA 1276
Query 1261 GAGTAACATGAATGATCTTGTCGCAGAGTACCAACAGTACCAAGATGCTACAGCTG--GA 1318
||| |||||||||||||| ||| | || |||||||| |||||||||||||| |||| ||
Sbjct 1277 GAGCAACATGAATGATCTGGTCTCTGAATACCAACAATACCAAGATGCTACCGCTGATGA 1336
Query 1319 -GAAGAGGAGTACGAGGAGGAAGAAGA 1344
||||| || || || || ||||||||
Sbjct 1337 AGAAGACGAATATGATGAAGAAGAAGA 1363
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67971537930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5