BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg948855 Length=335 Score E Sequences producing significant alignments: (Bits) Value AT5G43260.1 | Symbols: | chaperone protein dnaJ-related | chr5... 521 1e-147 > AT5G43260.1 | Symbols: | chaperone protein dnaJ-related | chr5:17357377-17358082 REVERSE LENGTH=706 Length=706 Score = 521 bits (282), Expect = 1e-147 Identities = 320/338 (95%), Gaps = 3/338 (1%) Strand=Plus/Plus Query 1 TCTCTCTTCTTGAAACCAACAATGAGTCCGATCGTCATAACCCAGTTAGCCACAGGTCTA 60 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 76 TCTCTCTTATTGAAACCAACAATGAGTCCGATCGTCATAACCCAGTTAGCTACAGGAATC 135 Query 61 AGCGTTTTAGCCGGTGCGGTCTTTATCAAATCGGTCTTGGACCAAAAACCTATGGCTGGT 120 |||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| Sbjct 136 AGCGTTTTAGCCGGTGCGGTCTTTATCAAATCAGTCATGGACCAAAAGCCTATGGCTGGT 195 Query 121 CAATTCCCTCGTTGTCCGACTTGTAACGGTACGGGACGAGTCACGTGTTTCTGTTCTCGT 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 196 CAATTCCCTCGTTGTCCGACTTGTAACGGTACTGGACGAGTCACGTGTTTCTGTTCTCGA 255 Query 181 TGGTCTGATGGCGACGTTGGATGTCGTAGGTGTTCTGGTTCAGGTCGTGCGGCTTGTAGC 240 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 256 TGGTCCGATGGTGACGTTGGATGTCGTAGGTGTTCTGGTTCAGGTCGTGCGGCTTGTAGC 315 Query 241 AATTGTGGTGGTTCTGGAACCGGTAGACCTTTACCGGCTCAGATTACGGTTCAACCACCG 300 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 316 AATTGTGGTGGTTCTGGAACTGGTAGACCTTTACCGGCTCAGATTACGGTTCAGCCACCG 375 Query 301 AATCGTCCTTATTGAT--T-CTCAAGAAATTTGTTTAC 335 |||||||||||||||| | |||||||||||||| ||| Sbjct 376 AATCGTCCTTATTGATGATTCTCAAGAAATTTGTATAC 413 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15633269939 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5