BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg948948
Length=1367
Score E
Sequences producing significant alignments: (Bits) Value
AT5G42830.1 | Symbols: | HXXXD-type acyl-transferase family pr... 1923 0.0
AT5G07870.1 | Symbols: | HXXXD-type acyl-transferase family pr... 279 4e-74
AT5G07850.1 | Symbols: | HXXXD-type acyl-transferase family pr... 178 1e-43
> AT5G42830.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr5:17176384-17178018 FORWARD LENGTH=1465
Length=1465
Score = 1923 bits (1041), Expect = 0.0
Identities = 1271/1377 (92%), Gaps = 35/1377 (3%)
Strand=Plus/Plus
Query 21 ATGGATTCTTCATCTTCAGTAAAAATCGTCTCGAAATGCTTCGTGAAACCCAAAACCATA 80
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1 ATGGATTCTTCATCTTCAGTAAAAATCGTCTCGAAAAGCTTCGTGAAACCCAAAACCTTA 60
Query 81 CCAGAAGAATCAAAGCAACCATACTATTTATCTCCATGGGACTACGCAATGCTCTCTGTT 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CCAGAAGAATCAAAGCAACCATACTATTTATCTCCATGGGACTACGCAATGCTCTCTGTT 120
Query 141 CAATACATCCAAAAAGGTCTTCTCTTTCACAAGCCATCACTTGACTCCATTGACACT-TT 199
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 121 CAGTACATCCAAAAAGGTCTTCTCTTTCACAAGCCACCACTTGACTCCATTGACACTCTT 180
Query 200 GCTTGAGAAGCTAAGAGAGTCTCTGGCTGTCACACTAGTCCATTTCTACCCTCTCGCGGG 259
||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 181 -CTTGAGAAGCTAAAAGATTCTCTGGCCGTCACACTAGTCCATTTCTACCCTCTCGCGGG 239
Query 260 TCGTCTCTCGTCGTTGACAACCGAAAATCCGAAATCTTACTCTGTTTTTGTTGATTGTAA 319
||| ||||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||
Sbjct 240 TCGCCTCTCATCGTTAACAACGGAAAAACCGAAATCTTACTCTGTTTTCGTTGATTGTAA 299
Query 320 CGAGAGCCCTGGCGCTGGGTTTATCTACGCGACCTCAGATTTATGTGTAGAAGATATTGT 379
||| ||||||||||| |||||||||||||||||||||||||||||| || ||||||||||
Sbjct 300 CGATAGCCCTGGCGCGGGGTTTATCTACGCGACCTCAGATTTATGTATAAAAGATATTGT 359
Query 380 GGGTGCTAAGTATGTTCCTTCGATTGTTCATTCTTTCTTTGACCATCACAGAGCTGTGAA 439
||||||||||||||| ||||| |||||||| ||||||||||||||||||| |||||||||
Sbjct 360 GGGTGCTAAGTATGTCCCTTCAATTGTTCAATCTTTCTTTGACCATCACAAAGCTGTGAA 419
Query 440 TCATGATGGACACACCCTGAG-C-C---TCT-T--A--T--C---A---GTCCA--GAA- 478
|||||||||||||||| |||| | | ||| | | | | | || | |||
Sbjct 420 TCATGATGGACACACCATGAGCCTCTTATCTGTCCAGGTGACAGAATTGGTAGATGGAAT 479
Query 479 --T--T-GGACTGTCTATGAACCATGTGATGGGAGACGGTACTGCCTTCTGGAAG-TCTT 532
| | ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||
Sbjct 480 TTTCATAGGACTGTCTATGAACCATGCGATGGGAGACGGTACTGCGTTCTGGAAGTTCTT 539
Query 533 TACCGCTTGGTCCGAAATCTTCCAAGGACAAGAAAGCAACAAAAACAATGACTTGTGTCT 592
|||||| |||||||||||||||||||||||||| |||||| ||||| |||||||||||||
Sbjct 540 TACCGCATGGTCCGAAATCTTCCAAGGACAAGAGAGCAACCAAAACGATGACTTGTGTCT 599
Query 593 TAAAAATCCACCGGTCTTAAAGCGTTACATCCCTGAAGGATACGGTCCTCTCTTCAGCCT 652
||| |||||||| || || |||||||||||||||||||||||||||||||| ||||||||
Sbjct 600 TAAGAATCCACCCGTGTTGAAGCGTTACATCCCTGAAGGATACGGTCCTCTATTCAGCCT 659
Query 653 TCCCTATAGCCATCCTGATGAATTTATCAGAACCTACGAATCTCCAGTTCTCAAGGAAAG 712
||| ||||| ||||| |||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 660 TCCATATAGTCATCCAGATGAATTTATCAGAACCTACGAATCTCCAATTCTCAAGGAGAG 719
Query 713 AATGTTCTGTTTCTCATCAGAAACCATAAGATTGCTTAAAGCAAAGGTCAACCAAATATG 772
||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||
Sbjct 720 AATGTTCTGTTTCTCATCAGAAACCATAAGAATGCTTAAAACAAGGGTCAACCAAATATG 779
Query 773 CGGAACTACCTCCATTTCATCTTTCCAGTCGCTAACCGCGGTTATATGGAGATGCATAAC 832
|||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 780 CGGAACAACCTCCATCTCATCTTTCCAATCGCTAACCGCGGTTATATGGAGATGCATAAC 839
Query 833 AAGGGC-ACGGAGATTACCCCTCGACCGAGAAACAAGTTGTAGAATTGCTGCTGACAACA 891
|||||| | |||||||||| ||||| |||||||||||||||||| |||||||||||||||
Sbjct 840 AAGGGCGA-GGAGATTACCTCTCGATCGAGAAACAAGTTGTAGAGTTGCTGCTGACAACA 898
Query 892 GAGGAAGAATGTATCCACCGCTTCACAAGGAGTACTTTGGAAACTGCCTCTCTTCTTTGA 951
||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||
Sbjct 899 GAGGAAGAATGTATCCACCGCTTCACAAGGATTACTTCGGAAACTGCCTCTCTGCTTTGA 958
Query 952 GAACGGCTGCAAAAGCTGGTGAGCTGA-TGGAGAATGATCTTGGATTTGCTGCTTTGAAA 1010
|||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||
Sbjct 959 GAACGGCTGCAAAAGCTGGTGAACT-ATTGGAGAATGATCTTGGATTTGCTGCTTTGAAA 1017
Query 1011 GTGCATCAAGCGGTAGCTGAACATACTAGTGAAAAAGTATCTCAAATGATTGATCAATGG 1070
||||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct 1018 GTGCATCAAGCAGTAGCTGAACATACGAGCGAAAAGGTATCTCAAATGATTGATCAATGG 1077
Query 1071 TTAAAGTCCCCTT-TCATTTACCATATTGATCGGCTTTTTGAACCGATGAGCGTTGTGAT 1129
||||||| |||| | |||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 1078 CTAAAGTCTCCTTAT-ATTTACCATATTGATCGGCTATTTGAACCGATGAGCGTTATGAT 1136
Query 1130 GGGAAGCTCACCGAGGTTTAACAAGTATGGTTGTGAATTTGGGATGGGAAAAGGAGTGAC 1189
||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 1137 GGGAAGCTCGCCGAGGTTTAATAAGTATGGTTGTGAATTTGGGTTGGGAAAAGGAGTGAC 1196
Query 1190 ACTAAGAAGTGGCTACGCGCATAAGTTTGATGGAAAGGTATCTGCTTACCCGGGAAGAGA 1249
|| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1197 GCTTAGAAGTGGCTATGCGCATAAGTTCGATGGAAAGGTATCTGCTTACCCGGGAAGAGA 1256
Query 1250 AGGAGGGGGAAGTATAGATTTGGAGGTATGTCTTGTTCCAGAGTTTATGGAAGCTTTGGA 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 AGGAGGGGGAAGTATAGATTTGGAGGTATGTCTTGTTCCAGAGTTTATGGAAGCTTTGGA 1316
Query 1310 ATCAGATGAAGAGTTTATGTCACTTGTTTCTCTTTAAAAAATTACCAATTTCTTCCA 1366
||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||
Sbjct 1317 ATCAGATGAAGAGTTCATGTCACTTGTTTCTCTTTGAAAATTTACCAATTTCTTCCA 1373
> AT5G07870.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr5:2513794-2515418 FORWARD LENGTH=1532
Length=1532
Score = 279 bits (151), Expect = 4e-74
Identities = 513/681 (75%), Gaps = 51/681 (7%)
Strand=Plus/Plus
Query 689 CGAATCTCCAGTTCTCAAGGAAAGAATGTTCTGTTTCTCATCAGAAACCA-TAAGATTGC 747
|||| |||| ||| | ||||| || |||||| |||||||||||||| || | |||| ||
Sbjct 802 CGAACCTCCGGTTTTGAAGGAGAGGATGTTCCATTTCTCATCAGAAA-CAGTGAGATCGC 860
Query 748 TTAAAGCAAAGGTC-AACCAA-ATATGCGGAACTAC-CTCCATTTCATCTTTCCAGTCGC 804
| ||| |||||| | || ||| | ||||||||| || | || || ||||| ||| | |
Sbjct 861 TGAAATCAAAGG-CGAATCAAGA-ATGCGGAACAACAAT-GATCTCTTCTTTTCAGGCTC 917
Query 805 TAACCGCGGTT-ATATGGAGATGCATAACAAGGGCACGGAGATTACC-CCTCGACCGAGA 862
| ||||| || ||||||||| |||| ||||| ||| | | | |||| | || | |||
Sbjct 918 TGACCGC-ATTGATATGGAGAAGCATTACAAGAGCAAGAAAACTACCAAAT-GATCAAGA 975
Query 863 AACAAGTTGTAGAATTGCTGCT-GACAACAGAGGAAGAATGTATCCACCGCTT-CACAAG 920
||| | ||| || |||||||| || |||||| ||||||| ||||||| || | | |
Sbjct 976 AACTACTTGCAGGTTTGCTGCTGGA-AACAGATCAAGAATGAATCCACC-ATTGC-CGAC 1032
Query 921 GAGT-ACTTTGGAAACTGCCTCTCTTCTT-TGAGAACGGCTGC-AAAAGCTGGTGAGCTG 977
|| | | |||||| | | |||| |||| ||| |||| || | |||| | ||| | ||
Sbjct 1033 GAATCAATTTGGAGTTTACATCTC-TCTTGTGAAAACGACTACTAAAATC-GGTAATCT- 1089
Query 978 A-TGGAGAATGA-TCTTGGATTTG-CTGCTTTGAAAGTGCATCAAGC-GGTAGCTGAACA 1033
| |||||||||| | ||||| | | |||||||||| |||||||||| | || | |||||
Sbjct 1090 ACTGGAGAATGAGT-TTGGA-TGGATTGCTTTGAAACTGCATCAAGCTGTTA-CCGAACA 1146
Query 1034 TACTAGTGAAAAAGTATCTCAAATG--ATTGATC-AATGGTTAAAGTCCCCTTT--CATT 1088
||| | | ||||| ||||| | | || |||| ||| ||| ||||| ||||| | ||
Sbjct 1147 CACTGGCG-AAAAG-ATCTCTTACGAAATAGATCAAAT-GTTGAAGTCTCCTTTACCGTT 1203
Query 1089 --TACCATATTGA-TCGGCTTTTTGAACCGATGAGCGTTGTGATGGGAAGCTCACCGAGG 1145
| ||||| || | | |||||| | || | ||| |||||||| || || |||
Sbjct 1204 GCAAGCATATCGACTTTCCAATTTGAA-C-AT-A--GTTCACATGGGAAGTTCTCCAAGG 1258
Query 1146 TTTAACAAGTATGGTTGTGAATTTGGGATGGGAAAAG-GAGTGACACTAAGAAGTGGCTA 1204
||||||||||| || | || ||||||||||| |||| | ||| | | ||||| || ||
Sbjct 1259 TTTAACAAGTACGGAAGCGAGTTTGGGATGGGGAAAGCG-GTGGCGGTTAGAAGCGGTTA 1317
Query 1205 -CGCGCATAAGTTTGATGGAAAGGTATCTGCTTACCCGGGAAGAGAAGGAGGGGGAAGTA 1263
||| ||||| ||| || |||||||| ||||| || |||||| ||||||| | |||||
Sbjct 1318 TGGCG-GTAAGTATGACGGGAAGGTATCAGCTTATCCAGGAAGACAAGGAGGAGCAAGTA 1376
Query 1264 TAGATTTGGAGGTATGTCTTGTTCCAGAGTTTATGGAAGCTTTGGAATCAGATGAAGAGT 1323
|||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 1377 TAGATTTGGAAGTATGTCTACTTCCAGAGTTTATGGAAGCTTTGGAATCAGATCAAGAGT 1436
Query 1324 TTATGTCACTTGTTTCT-CTT 1343
| ||||| ||||| ||| |||
Sbjct 1437 TCATGTCTCTTGTCTCTTCTT 1457
> AT5G07850.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr5:2508917-2510503 FORWARD LENGTH=1371
Length=1371
Score = 178 bits (96), Expect = 1e-43
Identities = 179/218 (82%), Gaps = 9/218 (4%)
Strand=Plus/Plus
Query 1131 GGAAGCTCACCGAGGTTTAACAAGTATGGTTGTGAATTTGGGATGGGAAAAG-GAG-TGA 1188
|||||||| ||||||||||| | ||||| || || |||||||||||||||| | | ||
Sbjct 1150 GGAAGCTCTCCGAGGTTTAAGATGTATGAATGCGAGTTTGGGATGGGAAAAGCG-GTTG- 1207
Query 1189 CACTAAGAAGTGGCTA-CGCGCATAAGTTTGATGGAAAGGTATCTGCTTACCCGGGAAGA 1247
| | ||||| || || ||| |||||||||||| ||| |||| || || | ||||||
Sbjct 1208 CGGTTAGAAGCGGTTATGGCG-GTAAGTTTGATGGGAAGATATCAGCATATGCAGGAAGA 1266
Query 1248 GAAGGAGGGGGAAGTATAGATTTGGAGGTATGTCTTGTTCCAGAGTTTATGGAAGCTTTG 1307
|||||||| |||| ||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 1267 GAAGGAGGAGGAACCATAGATTTGGAAGTATGTCTTCTTCCAGAGTTTATGGAAGCTTTG 1326
Query 1308 GAATCAGATGAAGAGTTTATGTCAC-TTGTTTCT-CTT 1343
||||||||| |||| || ||||| | |||| ||| |||
Sbjct 1327 GAATCAGATCAAGAATTCATGTC-CGTTGTCTCTTCTT 1363
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67318930845
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5