BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg949426 Length=1072 Score E Sequences producing significant alignments: (Bits) Value AT5G49330.1 | Symbols: MYB111, ATMYB111, PFG3 | myb domain prot... 1602 0.0 > AT5G49330.1 | Symbols: MYB111, ATMYB111, PFG3 | myb domain protein 111 | chr5:19998952-20001378 REVERSE LENGTH=1309 Length=1309 Score = 1602 bits (867), Expect = 0.0 Identities = 1005/1072 (94%), Gaps = 7/1072 (1%) Strand=Plus/Plus Query 1 AGAAGAGATCGAGAGAAACGATGGGAAGGGCTCCGTGTTGCGAGAAAATCGGGTTGAAGA 60 |||||||| | ||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct 68 AGAAGAGA-C-CGAGAAGCAATGGGAAGGGCTCCGTGTTGTGAGAAAATCGGGTTGAAGA 125 Query 61 GAGGTCGATGGACCGCCGAGGAAGATGAGATTCTAACCAACTATATTCAGACCAATGGTG 120 |||| ||||||| ||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct 126 GAGGGAGATGGACAGCCGAGGAAGATGAGATCCTCACCAAGTATATTCAGACCAATGGTG 185 Query 121 AAGGTTCTTGGCGATCTTTGCCTAAGAAAGCTGGATTGTTGAGATGTGGAAAGAGCTGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 186 AAGGTTCTTGGCGATCTTTGCCTAAGAAAGCTGGATTGTTGAGATGTGGAAAGAGCTGTA 245 Query 181 GACTAAGGTGGATAAACTATTTAAGAAGAGACTTGAAAAGAGGAAATATTACGGCCGACG 240 ||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| Sbjct 246 GACTAAGGTGGATAAACTACTTAAGAAGAGACTTAAAAAGAGGAAATATTACTTCCGACG 305 Query 241 AAGAAGAAATAATCGTCAAGTTGCATTCCCTTCTCGGCAACAGATGGTCACTTATTGCAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 306 AAGAAGAAATAATCGTCAAGTTGCATTCCCTTCTCGGCAACAGATGGTCACTTATTGCAA 365 Query 301 CACATCTACCAGGAAGAACAGACAACGAAATTAAAAACTATTGGAACTCACATCTCAGCC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 CACATCTACCAGGAAGAACAGACAACGAAATTAAAAACTATTGGAACTCACATCTCAGCC 425 Query 361 GCAAAATCTACGCCTTCACTGCCGTTTCCGGAGACGAACACAATCTAGTCGTCGACGATT 420 |||||||||| ||||||||||||||||||||||| | |||||||||| ||||| ||||| Sbjct 426 GCAAAATCTATGCCTTCACTGCCGTTTCCGGAGATGGACACAATCTACTCGTCAACGATG 485 Query 421 TAGTCCTGAAGAAATCTTGTTCTTCGTCTACTGGAGCCAAGAACAATATTAAGACCaaga 480 ||||| |||||||||||||||| |||||| |||||||||||||||||| |||||||||| Sbjct 486 TAGTCTTGAAGAAATCTTGTTCATCGTCTTCTGGAGCCAAGAACAATAACAAGACCAAGA 545 Query 481 agaagaagaaaggaagaaCTAGTAGGTCATCCATGAAGAAACACAAACAAATGGTGACGG 540 |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 546 AGAAGAAGAAGGGAAGGACTAGTAGGTCATCCATGAAGAAACACAAGCAAATGGTGACGG 605 Query 541 CCTCGCAATGTTTCTCACAACCTAAAGAGCTAGAGAGTGAGATCAATGAGGGAGAGAAAA 600 |||| |||||||||||||||||||| |||||||||||||| ||| |||||||| | ||| Sbjct 606 CCTCACAATGTTTCTCACAACCTAAGGAGCTAGAGAGTGATTTCAGTGAGGGAGGGCAAA 665 Query 601 ATGGTAATTTCGAAGGAGAGTCTTTGGGGCCTTATGAGTGGTTGGATGGTGAGATAGAAC 660 |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 666 ATGGTAATTTTGAAGGAGAGTCTTTGGGGCCTTATGAGTGGTTGGATGGTGAGTTAGAAC 725 Query 661 GGCTCTTGAGTGGTTGTGTCTGGGAGTGTACTAGTGAAGAACCTGTGATTGGAGTAAATG 720 ||||||||||| ||||||||||||| || ||||||||||| |||||||||||||||||| Sbjct 726 GGCTCTTGAGTAGTTGTGTCTGGGAATGCACTAGTGAAGAGGCTGTGATTGGAGTAAATG 785 Query 721 ATGAAAAGGTTTGTGAGAGTGGGGACAATAGTAGTTGTTGTGTCGGTTTGTTTGAAGAAG 780 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 786 ATGAAAAGGTGTGTGAGAGTGGGGACAATAGTAGTTGTTGTGTTAATTTGTTTGAAGAAG 845 Query 781 AACAAGGAAGCGAGACAAAGATTGGTCACATAGGAATTACAAACGTTGATGATCATGATA 840 ||||||||||||||||||||||||||||| ||||||| ||| | |||||| ||||||| Sbjct 846 AACAAGGAAGCGAGACAAAGATTGGTCACGTAGGAATCACAGAGGTTGAT---CATGATA 902 Query 841 TGAAGGTAGAAA-AGGAAAGAGAGGGAAGTGTTTTGAGTTCGACTTCGAATGAAAGTAAT 899 ||| ||| |||| || |||||||||||||| |||| ||||||| ||| ||||||| |||| Sbjct 903 TGACGGTGGAAAGAG-AAAGAGAGGGAAGTTTTTTAAGTTCGAATTCAAATGAAAATAAT 961 Query 900 GATAAAGATTGGTGGGTTGGTCTATGTAATTCTTCAGAAGTTGGGTTTGGGATTGATGAG 959 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 962 GATAAAGATTGGTGGGTTGGTCTATGTAATTCTTCAGAAGTTGGGTTTGGGGTTGATGAG 1021 Query 960 GAGTTGCTTGATTGGGAGTTTCAAGGTAATGTGACTTGTCAAAGTGATGATCTCTGGGAT 1019 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 1022 GAGTTGCTTGATTGGGAGTTTCAAGGTAATGTCACTTGTCAAAGTGATGATCTATGGGAT 1081 Query 1020 CTCTCAGATATTGGAGAGATAACATTGGAGTGATACTACCGAGCAAGTGGAT 1071 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1082 CTCTCAGATATTGGAGAGATAACATTGGAGTGATACTACCGAGCAAGTGGAT 1133 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52509770070 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5