BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg949750 Length=715 Score E Sequences producing significant alignments: (Bits) Value AT5G51990.1 | Symbols: CBF4, DREB1D | C-repeat-binding factor 4... 998 0.0 > AT5G51990.1 | Symbols: CBF4, DREB1D | C-repeat-binding factor 4 | chr5:21117113-21117787 REVERSE LENGTH=675 Length=675 Score = 998 bits (540), Expect = 0.0 Identities = 635/680 (93%), Gaps = 10/680 (1%) Strand=Plus/Plus Query 21 ATGAATCCCTTTTACTC-AGCTTTCTCAGACTCGTTTCTCTCAATCTCCGATGACAGATC 79 |||||||| |||||||| | | ||| |||||||||||||||||||||||||| | ||||| Sbjct 1 ATGAATCCATTTTACTCTA-CATTCCCAGACTCGTTTCTCTCAATCTCCGATCATAGATC 59 Query 80 TCCGGTTTCGGACAGTAGTGAGTGTTCACCGAAGTTAGCTTCGAGTTGTCCTAAGAAACG 139 ||||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||| Sbjct 60 TCCGGTTTCAGACAGTAGTGAGTGTTCACCAAAGTTAGCTTCAAGTTGTCCAAAGAAACG 119 Query 140 AGCTGGGAGGAAGAAGTTTCGTGAGACACGTCATCCGATTTACAGAGGAGTTCGTCAGAG 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 AGCTGGGAGGAAGAAGTTTCGTGAGACACGTCATCCGATTTACAGAGGAGTTCGTCAGAG 179 Query 200 GAATTCTGGTAAATGGGTTTGTGAAGTGAGGGAACCGAATAAGAAATCTAGGATTTGGTT 259 ||||||||||||||||||||||||||| || || || ||||||||||||||||||||||| Sbjct 180 GAATTCTGGTAAATGGGTTTGTGAAGTTAGAGAGCCTAATAAGAAATCTAGGATTTGGTT 239 Query 260 AGGTACTTTTCCGACGGTTGAAATGGCTGCTCGTGCTCATGATGTTGCTGCTTTAGCTCT 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 AGGTACTTTTCCGACGGTTGAAATGGCTGCTCGTGCTCATGATGTTGCTGCTTTAGCTCT 299 Query 320 CCGTGGTCGCTCTGCTTGTCTCAATTTCGCTGATTCGGCTTGGAGGCTTCGTATTCCTGA 379 ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct 300 TCGTGGTCGCTCTGCTTGTCTCAATTTCGCTGATTCTGCTTGGCGGCTTCGTATTCCTGA 359 Query 380 GACTACTTGTCCTAAGGAGATTCAGAAAGCGGCGGCTGAAGCTGCAATGGCGTTTCAGAA 439 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct 360 GACTACTTGTCCTAAGGAGATTCAGAAAGCTGCGTCTGAAGCTGCAATGGCGTTTCAGAA 419 Query 440 TGAGAGTATGAcggagggatctaaaactgcggcggaggtggaggcggaggcggctgggga 499 ||||| || ||||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct 420 TGAGACTACGACGGAGGGATCTAAAACTGCGGCGGAGGCAGAGG---AGGCGGCAGGGGA 476 Query 500 gggggagagggagagggagaggagggtggaggagcaga--g-TAGTGTGTTTTATATGGA 556 ||||| ||||||| |||||||||||| ||||||||||| | | |||||||||||||||| Sbjct 477 GGGGGTGAGGGAGGGGGAGAGGAGGGCGGAGGAGCAGAATGGTGGTGTGTTTTATATGGA 536 Query 557 TGAAGAGGCGGTTTTGGGGATGCCGACCTTTTTTGAGAATATGGCGGAGGGGATGCTTTT 616 ||| |||||| ||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 537 TGATGAGGCGCTTTTGGGGATGCCCAACTTTTTTGAGAATATGGCGGAGGGGATGCTTTT 596 Query 617 GCCGCCGCCGGAAATTGGCTGGAATCATAACGACTTTGACGGAGATGC-TGACGTGTCAC 675 ||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||| Sbjct 597 GCCGCCGCCGGAAGTTGGCTGGAATCATAACGACTTTGACGGAG-TGGGTGACGTGTCAC 655 Query 676 TCTGGAGTTTCGACGATTAA 695 |||||||||| ||||| ||| Sbjct 656 TCTGGAGTTTTGACGAGTAA 675 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34661561430 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5