BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg949767 Length=904 Score E Sequences producing significant alignments: (Bits) Value AT5G52120.1 | Symbols: AtPP2-A14, PP2-A14 | phloem protein 2-A1... 1411 0.0 > AT5G52120.1 | Symbols: AtPP2-A14, PP2-A14 | phloem protein 2-A14 | chr5:21176422-21180310 REVERSE LENGTH=1282 Length=1282 Score = 1411 bits (764), Expect = 0.0 Identities = 863/910 (95%), Gaps = 9/910 (1%) Strand=Plus/Plus Query 1 TATCATCCGATCTTT--C-ATCTATGGGGGCGGCTTCATCGAGCATCGCT-GGATCAGAA 56 ||||||| |||||| | || |||||||||||||||||||||||||| | |||| ||| Sbjct 145 TATCATCTAATCTTTACCAATATATGGGGGCGGCTTCATCGAGCATCG-TCCGATCCGAA 203 Query 57 CCTTTTGCCGGAAAGTTATGCGGTCTCGAAGATGTGCCTGAGAACTGTGTAACGGCAATG 116 ||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| Sbjct 204 CCTTTTGCCGGAAAGTTATGCGGCCTCGAAGATGTGCCTGAGAACTGTATAACAGCAATG 263 Query 117 TTCATGTACATGGAGCCACCGGAGATCTGCCTACTTGCTAGGGTAAATAAGTCATTTCAT 176 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 264 TTCATGTACATGGAGCCACCGGAGATCTGCCTGCTTGCTAGGGTAAATAAATCATTTCAT 323 Query 177 AGGGCGTCGAGATCCGATGCGGTGTGGGAACACAAGCTTCCTCCTAACTACAAGTTTCTG 236 |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||| Sbjct 324 AGGGCGTCGAGATCCGATGCCGTGTGGGAAGACAAGCTTCCTAGTAACTACAAGTTTCTG 383 Query 237 GTCCGAAGAATTCTTGAAGATCAACAACAAGTAGGAGAAAAAGAAAAACTTA-TCATCCG 295 ||||||||||||||||||||||||||||||||||||| |||||| ||||||| | | ||| Sbjct 384 GTCCGAAGAATTCTTGAAGATCAACAACAAGTAGGAGTAAAAGACAAACTTATTTA-CCG 442 Query 296 CAAGAAAGAGATCTATGCAAGGCTTTGCCGACCAAACCTCTTCGACGCCGGCACAAAGGA 355 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 443 CAAGAAAGAGATCTATGCAAGGCTTTGCCGACCAAACCTCTTCGACACCGGCACAAAGGA 502 Query 356 AGCATGGTTGGACAAGAGAAGTGGGAAAGTGTTTTTGGCGATATCACCAAAGGCAATGAA 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 503 AGCATGGTTGGACAAGAGAAGTGGGAAAGTGTTTTTGGCGATATCACCAAAGGCAATGAA 562 Query 416 GGTAACCGGCATTGATGATCGCCGATATTGGGAACATATTTCTTCTGACGAATCCAGATT 475 | ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 563 GATAACCGGCATTGATGATCGCCGATATTGGGAACATATTTCTTCCGATGAATCCAGATT 622 Query 476 TGGATCTATGGCTTATCTCCGGCAAATATGGTGGTTAGAAGCAGTTGGGAAAATCAGATT 535 |||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 623 TGGATCAATAACTTATCTCCGGCAAATATGGTGGTTAGAAGCAGTTGGAAAAATCAGATT 682 Query 536 CGAATTTTCACCCGGAAAATACAGTTTA-TATTTCAAGATACAATTAGGAAAACCTATTA 594 ||||||| |||||||||||||||||||| | |||||||||||||||||| |||||||||| Sbjct 683 CGAATTTGCACCCGGAAAATACAGTTTACT-TTTCAAGATACAATTAGGCAAACCTATTA 741 Query 595 GAAAGTGTGGGAGGAAAACATATAGTTTGGACCAAGTTCATGGCTGGGATATCAAACCGG 654 ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct 742 GAAAGTGTGGGAGGAAAACATGTAGTTTGGACCAAGTTCATGGCTGGGACATCAAACCGG 801 Query 655 TCCGGTTTCAATTGTCTACATCGGATGGCCAATGCGCTATGTCGGAACGGCATCTGGACG 714 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| | Sbjct 802 TCCGGTTTCAGTTGTCTACATCGGATGGCCAATGCGCTATGTCGGAACGACATTTGGATG 861 Query 715 AACCGGGGAGGTGGGTTTATCATCACGCGGGTGACTTCGTCGTAGAGAATCAGAACTCAC 774 | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 862 AGTCGGGGAGGTGGGTTTATCATCATGCGGGTGACTTCGTCGTAGAGAATCAGAACTCAC 921 Query 775 CCGTTTGGGTCAAATTCTCTATGCTCCAGATAGATTGTACACATACCAAAGGTGGGTTAT 834 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 922 CCGTTTGGGTCAAATTCTCTATGCTCCAGATAGATTGTACACATACCAAAGGTGGTTTAT 981 Query 835 GTTTAGATTGTGTGATCATATGTCCATTTGAGTATATAGGGAAATACAAATATTCCGATT 894 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 982 GTTTAGATTGTGTGATCATATGTCCATTTGAGTATAGAGGGAAATACAAATATTCCGATT 1041 Query 895 AAATGTTTTT 904 |||||||||| Sbjct 1042 AAATGTTTTT 1051 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44155815213 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5