BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950020 Length=1276 Score E Sequences producing significant alignments: (Bits) Value AT5G53970.1 | Symbols: | Tyrosine transaminase family protein ... 1989 0.0 > AT5G53970.1 | Symbols: | Tyrosine transaminase family protein | chr5:21910533-21912777 FORWARD LENGTH=1571 Length=1571 Score = 1989 bits (1077), Expect = 0.0 Identities = 1220/1288 (95%), Gaps = 14/1288 (1%) Strand=Plus/Plus Query 1 GATCGAATTCAAGAAG-AGAGATGGAGAAT-G-G-AACAACGACGAGCACAATTACCATC 56 |||||||||||||||| ||||||||||||| | | ||| ||||||||||||||||||||| Sbjct 123 GATCGAATTCAAGAAGAAGAGATGGAGAATGGAGCAACGACGACGAGCACAATTACCATC 182 Query 57 AAAGGGATTCTGAGTTTGCTAATGGAAAGTAT--C-TCAGAGGAAGAAGAA--A-GAAAG 110 ||||||||||||||||||||||||||||| || | |||||||||| ||| | ||||| Sbjct 183 AAAGGGATTCTGAGTTTGCTAATGGAAAGCATCACAACAGAGGAAGATGAAGGAGGAAAG 242 Query 111 AGAGTAATATCTCTGGGAATGGGAGACCCAACACTATACTCATGTTTTCGTACAACACAA 170 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 243 AGAGTAATATCTCTGGGAATGGGAGACCCAACACTCTACTCGTGTTTTCGTACAACACAA 302 Query 171 GTCTCTCTTCAAGCTGTTTCTGATTCTCTTCTCTCTAACAAGTTCCATGGTTATTCTCCT 230 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 303 GTCTCTCTTCAAGCTGTTTCTGATTCTCTTCTCTCCAACAAGTTCCATGGTTACTCTCCT 362 Query 231 ACCGTCGGTCTTCCCCAAGCTCGAAGGGCAATTGCAGAGTATCTATCGCGTGATCTTCCA 290 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 363 ACCGTCGGTCTTCCCCAAGCTCGAAGGGCAATAGCAGAGTATCTATCGCGTGATCTTCCA 422 Query 291 TACAAA-TTGTCACTGGATGATGTGTTTATCACATCAGGTTGTACGCAAGCAATCGATGT 349 |||||| || |||| ||||||||||||||||||||| ||||| |||||||| |||||||| Sbjct 423 TACAAACTT-TCACAGGATGATGTGTTTATCACATCGGGTTGCACGCAAGCGATCGATGT 481 Query 350 AGCATTGTCAATGTTGGCTCGTCCCAGGGCCAATATTCTGCTTCCAAGACCTGGTTTCCC 409 ||||||||| ||||| |||||||||||||| ||||| || |||||||| ||||||||||| Sbjct 482 AGCATTGTCGATGTTAGCTCGTCCCAGGGCTAATATACTTCTTCCAAGGCCTGGTTTCCC 541 Query 410 AATCTATGAACTCTGTGCTAAGTTTAGACACCTTGAGGTTCGTTACGTCGATCTTCTTCC 469 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 542 AATCTATGAACTCTGTGCTAAGTTTAGACACCTTGAAGTTCGCTACGTCGATCTTCTTCC 601 Query 470 AGAAAACGGATGGGAGATCGATCTTGATGCTGTCGAGTCTCTTGCAGACGAAAACACTGT 529 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 602 GGAAAATGGATGGGAGATCGATCTTGATGCTGTCGAGGCTCTTGCAGACGAAAACACGGT 661 Query 530 TGCTTTGGTTATTATAAACCCCGGTAATCCTTGTGGGAATGTCTATAGTTATCAGCATTT 589 |||||||||| |||||||||| ||||||||||| |||||||||||||| || |||||||| Sbjct 662 TGCTTTGGTTGTTATAAACCCTGGTAATCCTTGCGGGAATGTCTATAGCTACCAGCATTT 721 Query 590 GATGAAGATTGCGGAAAT-GGCGAAAAAATTAGGGTTTCTTGTGATTGCTGATGAAGTTT 648 |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct 722 GATGAAGATTGCGG-AATCGGCGAAAAAACTAGGGTTTCTTGTGATTGCTGATGAGGTTT 780 Query 649 ACGGTCATCTCGCTTTTGGTAGCAAACCGTTTGTGCCGATGGGTGTGTTTGGATCTATTG 708 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 781 ACGGTCATCTTGCTTTTGGTAGCAAACCGTTTGTGCCAATGGGTGTGTTTGGATCTATTG 840 Query 709 TTCCTGTGCTTACTCTTGGCTCTTTATCAAAGAGATGGATAGTTCCTGGTTGGCGGCTCG 768 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 841 TTCCTGTGCTTACTCTTGGCTCTTTATCAAAGAGATGGATAGTTCCAGGTTGGCGACTCG 900 Query 769 GGTGGTTTGTGACCACTGATCCTTCTGGTTCGTTTAAGGACCCTAAGATCATCGAGCGGT 828 |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||| ||| Sbjct 901 GGTGGTTTGTCACCACTGATCCTTCTGGTTCCTTTAAGGACCCTAAGATCATTGAGAGGT 960 Query 829 TTAAGAAATACTTTGATATTCTTGGTGGACCAGCTACATTTATTCAGGCTGCAGTTCCCA 888 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 TTAAGAAATACTTTGATATTCTTGGTGGACCAGCTACATTTATTCAGGCTGCAGTTCCCA 1020 Query 889 CTATTTTGGAACAGACGGATGAATCATTCTTCAAGAAAACATTGAACTCGTTGAAGAACT 948 |||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct 1021 CTATTTTGGAACAGACGGATGAGTCTTTCTTCAAGAAAACCTTGAACTCGTTGAAGAACT 1080 Query 949 CTTCGGATATTTGTTGTGATTGGATCAAGGAGATTCCTTGCATTGATTCCTCGCATCGAC 1008 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1081 CTTCGGATATTTGTTGTGACTGGATCAAGGAGATTCCTTGCATTGATTCCTCGCATCGAC 1140 Query 1009 CAGAAGGATCCATGGCAATGATGGTTAAGCTGAATCTCTCAATACTCGAAGATGTAAGCG 1068 ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| | Sbjct 1141 CAGAAGGATCCATGGCAATGATGGTTAAGCTGAATCTCTCATTACTTGAAGATGTAAGTG 1200 Query 1069 ACGATATCGACTTCTGTTTCAAGTTAGCTAGAGAAGAATCAGTCATCCTTCTTCCCGGGA 1128 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 1201 ACGATATCGACTTCTGTTTCAAGTTAGCTAGGGAAGAATCAGTCATCCTTCTTCCTGGGA 1260 Query 1129 CCGCGGTGGGGCTGAAGAACTGGCTGAGGATAACGTTTGCGGCAGATGCACCTTCGATCG 1188 |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | Sbjct 1261 CCGCGGTGGGGCTGAAGAACTGGCTGAGGATAACGTTTGCAGCAGATGCAACTTCGATTG 1320 Query 1189 AAGAAGCTTTTAAAAGGATCAAATGTTTCTATCTTAGACATGCCAAAACTCAATATCCAA 1248 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1321 AAGAAGCTTTTAAAAGGATCAAATGTTTCTATCTTAGACATGCCAAGACTCAATATCCAA 1380 Query 1249 CCTTATAGTTGATTTCTGATTTTGGTAT 1276 || ||||||||||||||||||||||||| Sbjct 1381 CCATATAGTTGATTTCTGATTTTGGTAT 1408 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62750681250 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5