BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950116 Length=623 Score E Sequences producing significant alignments: (Bits) Value AT5G54660.1 | Symbols: | HSP20-like chaperones superfamily pro... 920 0.0 > AT5G54660.1 | Symbols: | HSP20-like chaperones superfamily protein | chr5:22203905-22205152 FORWARD LENGTH=790 Length=790 Score = 920 bits (498), Expect = 0.0 Identities = 572/608 (94%), Gaps = 3/608 (0%) Strand=Plus/Plus Query 1 CATTCGTCTCAATTTCTCTCATGACGAGTTGTAGTGGAAGTCTCAAACTAGAGATCCACA 60 ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct 26 CATTCGTCTCAATTTCTCTCATGACGAGTAGTAGTGGAAGCCTCAAACTAGAGATCCACA 85 Query 61 CCGACGACAAGACGCCGGGAAAGTGGAGCGTACCTCTCGGCGATGATGTTTTCCGAAGGT 120 | || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 86 CTGATGACAAGACGCCGGGAAAGTGGAGCGTACCGCTCGGCGATGATGTTTTCCGAAGGT 145 Query 121 TCTTGAGCGGGGGAGGAGGCTCCGAGAAGGCTGTGTTCGGTGAGGGATCTCTTTTTAGCC 180 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 146 TCTTGAGCGGGGGAGGAGGCTCGGAGAAGGCTGTGTTCGGTGAGGGGTCTCTTTTTAGCC 205 Query 181 CCTTTTTGTTCGGGAAGTACTTTGATCCATCAGATGCGTTTCCCTTGTGGGAGTTTGAGG 240 | |||||||||||||||||||||||||| ||||| || ||||| |||||||| ||||| | Sbjct 206 CGTTTTTGTTCGGGAAGTACTTTGATCCGTCAGACGCCTTTCCGTTGTGGGAATTTGAAG 265 Query 241 CTGAGGTTTTGCTGGCGAGCCTTAGGAGCTTAGGAGGACAGTGTAGAGTCGATTGGTCTC 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 266 CTGAGGTTTTGCTGGCGAGCCTTAGGAGCTT---AGGACAGTGTAGAGTCGATTGGTCTC 322 Query 301 AGACCGATCTAGCTTATGTCCTTAAATCTGATATCCCCGTGGTGGGGAAAAATTACGTGC 360 |||| |||| |||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 323 AGACGGATCAAGCTTATGTCCTTAAATCCGATATCCCCGTGGTGGGGAAAAATAACGTGC 382 Query 361 AGGTGTATGTGGACGTTAACGGAAAAGTAATGGAGATTAGTGGCCAGTGGAACAACAACA 420 ||||||| |||||| ||||||||| ||| ||||||||||||||||| ||||||| ||||| Sbjct 383 AGGTGTACGTGGACATTAACGGAAGAGTGATGGAGATTAGTGGCCAATGGAACAGCAACA 442 Query 421 AGAAAGCGGCGGCTAACGGTGACTGGAGAAGCGGCCGGTGGTGGGAACATGGCTATGTCC 480 ||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 443 AGAAAGCGGCGACCAACAGTGACTGGAGAAGCGGCCGGTGGTGGGAACATGGCTATGTCC 502 Query 481 GCCGTCTCGAGCTCCCTTGCGATGCCGACGCCAAAAACTCTGAAGCTTTCCTCTCCAACA 540 ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||| Sbjct 503 GCCGTCTCGAGCTTCCTAGCGATGCCGACGCCAAATACTCTGAAGCTTTCCTCTCTAACA 562 Query 541 ACGACGACTACTCTTTCTTAGAGATCCGAATCCCTAAGATTAATTCTAAGAACAAGTTTT 600 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 563 ACGACGATTACTCTTTCTTAGAGATCCGAATCCCTAAGATAAATTCTAAGAACAAGTTTT 622 Query 601 AATCTGAT 608 |||||||| Sbjct 623 AATCTGAT 630 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30040019906 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5