BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950321 Length=444 Score E Sequences producing significant alignments: (Bits) Value AT4G27410.3 | Symbols: RD26 | NAC (No Apical Meristem) domain t... 283 9e-76 > AT4G27410.3 | Symbols: RD26 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr4:13707900-13709013 REVERSE LENGTH=973 Length=973 Score = 283 bits (153), Expect = 9e-76 Identities = 169/176 (96%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 197 CAAGAAAACATCTGGATCTCAGAGACAAGCTGTTACTACCCCGGTTCAAGCTTGTCGTGA 256 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 531 CAAGAAAACATCTGGATCTCAGAGACAAGCTGTTACT---CCTGTTCAAGCTTGTCGTGA 587 Query 257 AGAGCATAGCACGAATGGGTCGTCATCGTCTTCTTCGTCTCAGCTTGACGACGTTCTTGA 316 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 588 AGAGCATAGCACGAATGGGTCGTCATCGTCTTCTTCATCACAGCTTGACGACGTTCTTGA 647 Query 317 TTCGTTCCCGGAGATAAAAGATCAGTCTTTTAATCTTCCTCGGATGAATTCGCTCA 372 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 648 TTCGTTCCCGGAGATAAAAGACCAGTCTTTTAATCTTCCTCGGATGAATTCGCTCA 703 Score = 250 bits (135), Expect = 9e-66 Identities = 143/147 (97%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 54 AAAATTATCACGGCGGATGGTCGTCGTGTCGGGATTAAAAAAGCTCTGGTTTTTTACGCC 113 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 355 AAAATTATCACGGCGGATGGTCGTCGTGTCGGGATTAAAAAAGCTCTGGTCTTTTACGCC 414 Query 114 GGAAAAGCTCCCAAAGGCACTAAAACAAACTGGATTATGCACGAGTATCGCTTAATCGAG 173 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 415 GGAAAAGCTCCCAAAGGCACTAAAACCAACTGGATTATGCACGAGTATCGCTTAATAGAA 474 Query 174 CATTCTCGTAGCCATGGAAGCTCCAAG 200 ||||||||||||||||||||||||||| Sbjct 475 CATTCTCGTAGCCATGGAAGCTCCAAG 501 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21112454580 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5