BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950353 Length=747 Score E Sequences producing significant alignments: (Bits) Value AT5G56840.1 | Symbols: | myb-like transcription factor family ... 1184 0.0 > AT5G56840.1 | Symbols: | myb-like transcription factor family protein | chr5:22980693-22982342 FORWARD LENGTH=988 Length=988 Score = 1184 bits (641), Expect = 0.0 Identities = 713/747 (95%), Gaps = 7/747 (1%) Strand=Plus/Plus Query 1 TCTCTTTCTCATTCATTGCAATGGGCAGAAGATGCTCACACTGTGGAAACGTAGGACATA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 77 TCTCTTTCTCATTCATTGCAATGGGCAGAAGATGCTCACACTGTGGAAACGTAGGACATA 136 Query 61 ACTCAAGAACATGTTCTTCTTACCAAACAGGAGTAATTAGACTCTTCGGTGTTCATCTAG 120 ||||||||||||||||||||||||||||| ||||| |||| ||||| ||||||||||||| Sbjct 137 ACTCAAGAACATGTTCTTCTTACCAAACAAGAGTAGTTAGGCTCTTTGGTGTTCATCTAG 196 Query 121 ACACCACAAGCTCTTCTCCGCCGCCTCCTCCTCCTCCCTCGATTTTGGCCGCTGCAATAA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 197 ACACCACAAGCTCTTCTCCGCCGCCTCCTCCTCCTCCCTCGATTTTGGCCGCTGCAATAA 256 Query 181 AGAAAAGCTTCAGCATGGATTGCTTGCCGGCATGTTCCTCCTCTTCCTCTTC-TTTCGCC 239 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 257 AGAAAAGTTTCAGCATGGATTGCTTGCCGGCATGTTCCTCCTCTTCCTCTTCCTTT-GCT 315 Query 240 GGTTATCTCTCCGATGGTCTCGCCCACAAAGCACCCGATCGTAAAAAAGGGGTTCCATGG 299 |||||||||||||||||||||||||| ||| |||| || || |||||||||||||||||| Sbjct 316 GGTTATCTCTCCGATGGTCTCGCCCATAAAACACCTGACCGCAAAAAAGGGGTTCCATGG 375 Query 300 ACGGAGGAAGAGCACCGGACGTTTCTAATTGGATTAGAGAAGCTTGGAAAAGGAGATTGG 359 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 376 ACGGCGGAAGAGCACCGGACGTTTCTAATTGGATTAGAAAAGCTTGGAAAAGGAGATTGG 435 Query 360 AGAGGAATCTCTAGAAACTACGTCGTCACAAAATCCCCGACACAAGTGGCAAGTCATGCT 419 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 436 AGAGGAATCTCTAGAAACTTCGTCGTCACAAAATCCCCGACACAAGTGGCAAGTCATGCT 495 Query 420 CAAAAGTACTTTCTCCGGCAAACCACCACTCGCCATCACAAGAGACGCCGCACCAGCCTC 479 ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct 496 CAAAAATACTTTCTCCGGCAAACTACCACTCTCCATCACAAGAGACGCCGCACCAGCCTC 555 Query 480 TTTGATATGGTTTCGGCCGGCAATGTTGAAGAAAATAGTACAATTAAGAGTATGTGTAAT 539 ||||||||||||||||||||||||||||||||||||||||| | |||||| || |||||| Sbjct 556 TTTGATATGGTTTCGGCCGGCAATGTTGAAGAAAATAGTACTACTAAGAGGATATGTAAT 615 Query 540 GATCATATTGGGTCGACCTCAAAGGTTGTTTGGAAACAAGGATTACTTAATCCTCGTCTA 599 |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 616 GATCATATTGGGTCGAGCTCAAAGGTTGTTTGGAAACAAGGATTACTCAATCCTCGTCTT 675 Query 600 GGATATCCAGATCCGAAAGTGA-CAGTATCCGGGTCCGGTAACTCCGGTGGCGGACTCGA 658 |||||||||||||||||||| | |||||||||| || |||||||||||||| |||||| Sbjct 676 GGATATCCAGATCCGAAAGT-ATCAGTATCCGGCTCGGGTAACTCCGGTGG---ACTCGA 731 Query 659 TCTTGAGCTGAAGCTTGCGTCCATTCAATCTCCTGAATCGAATATTAGACCTATTAGCGT 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 732 TCTTGAGCTGAAGCTTGCGTCCATTCAATCTCCTGAATCGAATATTAGACCTATTAGCGT 791 Query 719 TACGTGAATATATATAACACGTTATGA 745 ||||||||| ||||||||||||||||| Sbjct 792 TACGTGAATCTATATAACACGTTATGA 818 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36269054134 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5