BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950444 Length=890 Score E Sequences producing significant alignments: (Bits) Value AT5G57560.1 | Symbols: TCH4, XTH22 | Xyloglucan endotransglucos... 1437 0.0 AT2G18800.1 | Symbols: ATXTH21, XTH21 | xyloglucan endotransglu... 222 4e-57 AT2G12660.1 | Symbols: | pseudogene, xyloglucan endotransglyco... 128 9e-29 > AT5G57560.1 | Symbols: TCH4, XTH22 | Xyloglucan endotransglucosylase/hydrolase family protein | chr5:23307130-23308282 REVERSE LENGTH=1068 Length=1068 Score = 1437 bits (778), Expect = 0.0 Identities = 855/891 (96%), Gaps = 10/891 (1%) Strand=Plus/Plus Query 8 ACAATCTCTAAAAAATGTCAATCACTTACTTACTTCCTCTGTTTCTTTCTC---TCATCA 64 |||||||||| |||||| | ||||||||||| ||||||||||||||||||| |||||| Sbjct 34 ACAATCTCTAGAAAATGGCGATCACTTACTTGCTTCCTCTGTTTCTTTCTCTTATCATCA 93 Query 65 TCTCCTCTGTTTCAGCTAATTTCCAAAGAGACGTTGAGATCACTTGGGGTGATGGTCGTG 124 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 CCTCCTCTGTTTCAGCTAATTTCCAAAGAGACGTTGAGATCACTTGGGGTGATGGTCGTG 153 Query 125 GACAGATCAAGAACAATGGAGAGCTTCTTACTTTATCTCTAGATAAATCCTCTGGTTCTG 184 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 154 GACAGATCAAGAACAATGGAGAGCTTCTCACTTTATCTCTAGATAAATCCTCTGGTTCTG 213 Query 185 GATTCCAATCCAAAAACGAATACTTGTTCGGTAAAATCTCCATGCAAATGAAGCTTGTCC 244 ||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| Sbjct 214 GATTCCAATCCAAAAACGAGTACTTGTTTGGTAAAGTCTCCATGCAAATGAAGCTTGTCC 273 Query 245 CTGGAAACTCCGCAGGAACCGTCACAACACTCTACTTGAAATCACCTGGAACAACATGGG 304 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 274 CTGGAAACTCCGCAGGAACAGTCACAACACTTTACTTGAAATCACCTGGAACAACATGGG 333 Query 305 ACGAGATAGATTTCGAGTTTTT-GGGTAATTCAAGTGGAGATCCTTACACACTTCACACA 363 |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| Sbjct 334 ACGAGATAGATTTCGAGTTTTTAGGG-AATTCAAGTGGAGAACCTTACACACTTCACACA 392 Query 364 AATGTCTACACGCAAGGCAAAGGAGACAAAGAACAACAATTCAAACTCTGGTTTGATCCA 423 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 393 AATGTCTACACACAAGGCAAAGGAGACAAAGAACAACAATTCAAACTCTGGTTTGATCCA 452 Query 424 ACAGCTGATTTCCACACTTACACCATTCTCTGGAACCCACAAAGAATCATCTTCACCGTC 483 |||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 453 ACAGCTAATTTCCACACTTACACTATTCTCTGGAACCCACAAAGAATCATTTTCACCGTC 512 Query 484 GATGGAACTCCAATTAGAGAATTCAAGAACATGGAGTCTCTAGGCACTCTGTTTCCCAAG 543 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 513 GATGGAACTCCGATCAGAGAATTCAAGAACATGGAGTCTCTAGGCACTCTGTTTCCCAAG 572 Query 544 AACAAACCAATGAGGATGTACTCTAGTCTTTGGAACGCTGATGATTGGGCAACGAGAGGT 603 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 573 AACAAACCAATGAGAATGTACTCGAGTCTTTGGAACGCTGATGATTGGGCAACGAGAGGT 632 Query 604 GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCCTACCGTGGCTTTAAA 663 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct 633 GGTTTGGTCAAAACCGATTGGTCTAAAGCTCCTTTCACTGCTTCTTACCGTGGCTTTCAA 692 Query 664 CAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCTTCTTGTCCTAATGCCTCCAAACAGGGG 723 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 693 CAAGAAGCTTGTGTTTGGTCAAACGGCAAGTCTTCTTGTCCTAATGCCTCGAAACAGGGG 752 Query 724 AC--C-ACTGGCTCGTGGTTGTCACAAGAGCTTGACTCAACGGCTCAACAAAGGATGAGA 780 || | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 753 ACTACTACTGGCTCGTGGTTGTCACAAGAGCTTGACTCAACAGCTCAACAAAGGATGAGA 812 Query 781 TGGGTGCAGAGGAACTACATGATCTATAATTATTGTACGGATGCAAAGAGGTTCCCTCAA 840 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 813 TGGGTGCAGAGGAACTACATGATCTATAATTATTGTACGGATGCGAAGAGGTTCCCTCAA 872 Query 841 GGTCTTCCTAAAGAGTGCTTAGCTGCATAGAGAG--TAAAGCGTTGAGAGA 889 |||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 873 GGTCTTCCTAAAGAGTGCTTAGCTGCATAGAGAGAGTAAAGAGTTGAGAGA 923 > AT2G18800.1 | Symbols: ATXTH21, XTH21 | xyloglucan endotransglucosylase/hydrolase 21 | chr2:8144912-8146265 FORWARD LENGTH=953 Length=953 Score = 222 bits (120), Expect = 4e-57 Identities = 405/539 (75%), Gaps = 33/539 (6%) Strand=Plus/Plus Query 93 AGACGTTGAGATCACTTGGGGTGATGGTCGTGGACAGATCAAGAACAATGGAGA-GCTTC 151 |||| |||| || || |||||||||||| | ||| | || ||||||||| | |||| Sbjct 125 AGACATTGACATAACCTGGGGTGATGGTAGAGGAAATATTTTGAACAATGG-TACTCTTC 183 Query 152 TTACTTTATCTCTAGATAAATCCTCTGGTTCTGGATTCCAATCCAAAAACGAATACTTGT 211 | | | | ||| ||| |||| || ||||| || || ||||| ||| ||| || |||| Sbjct 184 TAAATCTCGGTCTTGATCAATCTTCGGGTTCAGGGTTTCAATCGAAAGCCGAGTATTTGT 243 Query 212 TCGGTAAAA-TCT-CCATGCAAATGAAGCTTGTCCCTGGAAACTCCGCAGGAACCGTCAC 269 ||| |||| | | ||||| || || |||||||| ||||| || || || ||||| || Sbjct 244 ACGG-AAAAGT-TGATATGCAGATCAAACTTGTCCCGGGAAATTCAGCCGGGACCGTGAC 301 Query 270 AACAC-TCTACTTGAAATCACCTGGAACAACATGGGACGAGATAGATTTCGAGTTTTTGG 328 || | |||||||||| || | ||| |||||||||||||||||||||||||||||||| Sbjct 302 CAC-CTTCTACTTGAAGTCTCAAGGATTAACATGGGACGAGATAGATTTCGAGTTTTTGG 360 Query 329 GTAAT-TCAAGTGGAGATCCTTACACACTTCACACAAATGTCTACACGCAAGGCAAAGGA 387 | ||| | | |||||||||| |||| ||||||| ||||| ||||| |||||||| || Sbjct 361 GGAATGTTA-GTGGAGATCCATACATTGTTCACACTAATGTTTACACTCAAGGCAAGGGT 419 Query 388 GACAAAGAACAACAATTCAAACTCTGGTTTGATCCAACAGCTGATTTCCACA-CTTACAC 446 || | ||| ||||||||| | || ||||| ||||||||||| | ||||||| || || | Sbjct 420 GATAGAGAGCAACAATTCTACCTTTGGTTCGATCCAACAGCCGCGTTCCACAACT-ACTC 478 Query 447 CATTCTCTGGAACCC-A--CAAAGAATCATCT-TCACCGTCGATGG-AACTCCAATTAGA 501 ||||| ||||| || | || | | | ||| | | | ||||| || ||||| ||| Sbjct 479 TATTCTATGGAATCCGAGTCACATAGTGTTCTAT-AT--T-GATGGGAAG-CCAATCAGA 533 Query 502 GAATTCAAGAACATGGA-GTCTCTAGGCACTCTG--TT-TCCCAAGAACAAACCAATGAG 557 |||||||||||| |||| || | | || | || || ||| |||||| |||| ||||| Sbjct 534 GAATTCAAGAACTTGGAAGTAT-TGGG---TGTGGCTTATCCAAAGAACCAACCCATGAG 589 Query 558 GATGTACTCTA-GTCTTTGGAACGCTGATGATTGGGCAACGAGAGGTGGTTTGGTCAAA 615 ||||| | | |||| |||||||| || |||||||| ||||| || || |||| ||| Sbjct 590 AATGTA-TGGAAGTCTATGGAACGCAGACGATTGGGCCACGAGGGGAGGGCTGGT-AAA 646 > AT2G12660.1 | Symbols: | pseudogene, xyloglucan endotransglycosylase, blastp match of 82% identity and 5.9e-44 P-value to GP|19911573|dbj|BAB86890.1||AB083025 syringolide-induced protein 19-1-5 {Glycine max} | chr2:5181465-5182059 REVERSE LENGTH=595 Length=595 Score = 128 bits (69), Expect = 9e-29 Identities = 112/133 (84%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 297 AACATGGGACGAGATAGATTTCGAGTTTTTGGGTAAT-TCAAGTGGAGATCCTTACACAC 355 ||||||||||||||||||||||||||||||||| ||| | | |||||||||| |||| Sbjct 432 AACATGGGACGAGATAGATTTCGAGTTTTTGGGGAATGTTA-GTGGAGATCCATACATTG 490 Query 356 TTCACACAAATGTCTACACGCAAGGCAAAGGAGACAAAGAACAACAATTCAAACTCTGGT 415 ||||||| ||||| ||||| |||||||| || || | ||| || |||||| | || |||| Sbjct 491 TTCACACTAATGTTTACACTCAAGGCAAGGGTGATAGAGAGCAGCAATTCTACCTTTGGT 550 Query 416 TTGATCCAACAGC 428 | ||||||||||| Sbjct 551 TCGATCCAACAGC 563 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43452537155 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5