BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950854 Length=1963 Score E Sequences producing significant alignments: (Bits) Value AT5G61010.1 | Symbols: ATEXO70E2, EXO70E2 | exocyst subunit exo... 3007 0.0 > AT5G61010.1 | Symbols: ATEXO70E2, EXO70E2 | exocyst subunit exo70 family protein E2 | chr5:24553898-24556749 FORWARD LENGTH=2852 Length=2852 Score = 3007 bits (1628), Expect = 0.0 Identities = 1857/1969 (94%), Gaps = 10/1969 (1%) Strand=Plus/Plus Query 1 CTCTAGTCTTTTGGTTTGGGTTATGGCAGAGTTTGAATCCAAGCTTCCTGTTTCCGGGGG 60 |||||||| |||||||| |||||||||||||||||| |||||| ||||||||||||| Sbjct 694 CTCTAGTC-TTTGGTTTTGGTTATGGCAGAGTTTGATTCCAAGGTTCCTGTTTCCGGAAT 752 Query 61 GAAAAATCATGTCTTTGAGGCATGTCACCATGTTGTTAAGGCACTGAGGGCATCTGATAA 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 753 GAACAATCATGTCTTTGAGGCATGTCACCATGTTGTTAAGGCACTGAGGGCATCTGATAA 812 Query 121 CAACCTGGATGCCAACTTGAGAAAGCTCCTAAGTGACCTAGAG-TCGCATTTGTCAACAT 179 ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||| Sbjct 813 CAACCTGGATGCCAATTTGAGAAAGCTCCTAAGTGACCTAGAGAT-GCATTTGTCAACAT 871 Query 180 TTGGGATTGCTGATACCAAAGTTGAAGATGCAGGATTCTCTGAGATCAAGGAGAGATTCA 239 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 872 TTGGGATTGCTGATACCAAAGTTGAAGATGCAGGATTCTCTGAGATCAAGAAGAGATTCA 931 Query 240 AAGAAGCTGTGAAGAAAATCCGCAGTAGGGAGACTAACCAATCGACGAT-TTTGGAAGCT 298 ||||||||||||||| |||||||||| ||||||| ||||| |||||||| ||| |||||| Sbjct 932 AAGAAGCTGTGAAGAGAATCCGCAGTTGGGAGACAAACCAGTCGACGATGTTT-GAAGCT 990 Query 299 GGTCTGTCTGCAGCAAATCAATTCTTTCAAGCCCTGTATGAAGTTCAATCAGTTCTTGTG 358 |||||||||| ||| |||| |||||||||||||||||||| |||||| ||||||||||| Sbjct 991 GGTCTGTCTGAAGCTGATCAGTTCTTTCAAGCCCTGTATGACGTTCAAACAGTTCTTGTG 1050 Query 359 GGTTTCAAAGCTTTACCCATCAAAACTAACCAGAAAGAGAAAGATGTTTACAACCAGGCT 418 |||||||||||||| ||||| ||||||||||||| |||||||||||||||||||| ||| Sbjct 1051 GGTTTCAAAGCTTTGCCCATGAAAACTAACCAGATGGAGAAAGATGTTTACAACCAAGCT 1110 Query 419 ACGGTTGCTCTTGACATCGCGATGCTGAGGCTTGAGAAAGAGCTCCGTGATGTTCTGCAT 478 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 1111 ACGGTTGCTCTTGACATCGCGATGTTGAGGCTTGAGAAAGAGCTCTGTGATGTTCTGCAT 1170 Query 479 CAGCACAAACAGCATGTACAGCCTGAATACTTGGCTGTTAGTTCCCATAGAAAGGATATT 538 |||||||||| ||||||||||||||| ||||||||||||||||||| |||||| |||||| Sbjct 1171 CAGCACAAACGGCATGTACAGCCTGATTACTTGGCTGTTAGTTCCCGTAGAAAAGATATT 1230 Query 539 GTGTACGACGAGTCCTTTGTTTCCTTAGATGATGAAGTTGTTGTTGAAGCCTCTTCACAC 598 |||||||||||||||||||| ||| |||||||||||||| |||| ||||| |||||||| Sbjct 1231 GTGTACGACGAGTCCTTTGTCTCCCTAGATGATGAAGTTATTGTCGAAGCTTCTTCACAT 1290 Query 599 GAAGATGATGAGCAGATATCAGA-TTTCTATAATTCTGATTTAGTTGATCCCATCGTCCT 657 ||||||||||| |||||||| || ||| |||||||||||||| |||||||||||||| || Sbjct 1291 GAAGATGATGAACAGATATCGGACTTT-TATAATTCTGATTTGGTTGATCCCATCGTACT 1349 Query 658 TCCTCACATTAAAGCTATTGCAAACACCATGTTTGCTTGCGAGTATGATCAACCATTCTG 717 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1350 TCCTCACATCAAAGCTATTGCAAACGCCATGTTTGCTTGCGAGTATGATCAACCATTCTG 1409 Query 718 TGAAGCTTTCATCATCGTTCAAAGAGAAGCTCTGGATGAGTATATGGTCACTCTTGAAAT 777 ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct 1410 TGAAGCTTTCATCGGCGTTCAAAGAGAAGCTCTGGAGGAGTATATGGTTACTCTCGAAAT 1469 Query 778 GGAAAGATTCAGCTGCGTTGATGTTCTCAAAATGGACTGGGAGGATTTGAATGGTGCAAT 837 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1470 GGAAAGATTCAGCTGCGTTGATGTTCTCAGAATGGACTGGGAGGATTTGAATGGTGCAAT 1529 Query 838 GAGAAAATGGACAAGGGTTGTTAAGATCATTACTCAGGTCTATCTCCCCAGTGAAAAACA 897 |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1530 GAGAAAATGGACAAAGGTTGTTAAGATCATTACTCAGGTCTATCTCGCCAGTGAAAAACA 1589 Query 898 GCTCTGTGAAGAGATCTTGGGAGACTTTGAGTCAATATCTACGGCTTGCTTCATTGAAAT 957 ||| ||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 1590 GCTATGTGATCAGATTTTGGGAGACTTTGAGTCAATTTCTACAGCTTGCTTCATTGAAAT 1649 Query 958 CTCAAAAGATACAGTTATATCCCTCCTCAACTTTGGAGAAGCTGTGGCGCTGAGATCTTG 1017 |||||||||| || || |||| ||||||||||||||||||||||||| |||||||||||| Sbjct 1650 CTCAAAAGATGCAATTCTATCACTCCTCAACTTTGGAGAAGCTGTGGTGCTGAGATCTTG 1709 Query 1018 CAAGCCAGAAATGCTTGAGCGCTTCCTTAGTATGTATGAGGTTTCAGCAGAGATTCTCTT 1077 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1710 CAAGCCAGAAATGCTTGAGCGCTTCCTTAGTATGTATGAGGTTTCAGCAGAGATTCTCGT 1769 Query 1078 GGATGTCGATAACCTCTTCCCGGATGAAACAGGCTCGTTTTTAAGAATTGCATTCCACGA 1137 ||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| | Sbjct 1770 GGATGTCGATAACCTCTTCCCCGATGAAACAGGCTCGTCTTTAAGAATTGCATTTCACAA 1829 Query 1138 CCTGTCaaaaaaaCTAGCTGATCATACAACCGCGACCTTCTTAAAGTTCAAAGACGCAAT 1197 ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 1830 CCTGTCAAAAAAACTAGCTGATCATACAACCACAACCTTCTTAAAGTTCAAAGACGCAAT 1889 Query 1198 AGCCTCAGATGAATCCGCACGCCCCTTTCATGGAGGCGGAATTCATCACCTGACTAGGTA 1257 |||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||| Sbjct 1890 AGCCTCAGATGAATCCACACGCCCCTTTCATGGAGGCGGGATTCATCACCTGACCAGGTA 1949 Query 1258 TGTAATGAACTACTTGAAGCTTCTCCCGGTGTATACCGACACCCTAAACTCACTTCTTCA 1317 ||||||||||||||||||||||||||||| |||||||||| | ||||||||||| ||||| Sbjct 1950 TGTAATGAACTACTTGAAGCTTCTCCCGGAGTATACCGACTCACTAAACTCACTGCTTCA 2009 Query 1318 GAACATACACGTTGACGACTCAATACCCGAGAAAACAGGAGAAGATGTCCTCCCTTCGAC 1377 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 2010 GAACATACACGTTGACGACTCCATCCCCGAGAAAACAGGAGAAGATGTCCTCCCTTCGAC 2069 Query 1378 ATTCTCTCCAATGGCTAGACACCTCAGGTCAATCGTCACAACTCTGGAATCCAGCCTTGA 1437 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2070 ATTCTCTCCAATGGCTAGACACCTCAGGTCAATCGTCACAACTCTAGAATCCAGCCTTGA 2129 Query 1438 GCGAAAAGCTCAGCTTTACGCAGACGAAGCACTGAAATCCATTTTCCTGATGAACAACTT 1497 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2130 GCGAAAAGCTCAGCTGTACGCAGACGAAGCACTGAAATCCATTTTCCTGATGAACAACTT 2189 Query 1498 CCGTTACATGGTCCAGAAGGTAAAGGGATCAGAGCTGAGACACTTGTTTGGAGACGAATG 1557 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2190 CCGTTACATGGTCCAGAAGGTAAAGGGATCAGAGCTGAGACGCTTGTTTGGAGACGAATG 2249 Query 1558 GATCAGGAAGCACATTGCAAGCTACCAACGCAATGTCACAAACTACGAGAGATCCTCATG 1617 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||| Sbjct 2250 GATCAGGAAGCACATTGCAAGCTACCAATGCAATGTCACTAACTACGAGAGATCCACATG 2309 Query 1618 GAGCTCTATACTTGCTTTGCTCACAGACAACAACAACTCTGTAAGAACCCTGAGAGAAAG 1677 |||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 2310 GAGCTCCATACTCGCTTTGCTCAGAGACAACAACGACTCTGTAAGAACCCTGAGAGAAAG 2369 Query 1678 ATGCAAACTTTTCAGCCTTGCATTTGATGATGTTTACAAGAACCAAACCCATTGGTCAGT 1737 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2370 ATGCAGACTTTTCAGCCTTGCATTTGATGATGTTTACAAGAACCAAACCCGTTGGTCAGT 2429 Query 1738 TCCTGATCCAGAGCTCCGCGATGATCTTCACATCTCAACCTCTGTCAAGGTTGTTCAGTC 1797 |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2430 CCCTGATTCAGAGCTCCGCGATGATCTTCACATCTCGACCTCTGTCAAGGTTGTTCAGTC 2489 Query 1798 TTACAGGGGATTTCTTGGAAGAAATGCGGTTCGTATAGGTGAAAAACATATCCGATACAC 1857 |||||| |||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct 2490 TTACAGAGGATTTCTTGGAAGAAATGCAGTTCGCATAGGCGAAAAACACATCCGATACAC 2549 Query 1858 TTGTGAAGACATTGAGAATATGCTCCTTGATCTCTTTGAATGTTCGCCATCTCCGAGATC 1917 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct 2550 TTGTGAAGACATTGAGAATATGCTCCTTGATCTCTTTGAATGTTTGCCATCTCCAAGATC 2609 Query 1918 ATTGCGCAGTTCTCGTA-G-GA-GATGATGATGATGACTCGAGCCTAAT 1963 | ||||||| ||||||| | || |||||||||||||||| ||||||||| Sbjct 2610 ACTGCGCAGCTCTCGTAAGAGATGATGATGATGATGACTTGAGCCTAAT 2658 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97238455665 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5