BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg950891
Length=2570
Score E
Sequences producing significant alignments: (Bits) Value
AT5G61350.1 | Symbols: | Protein kinase superfamily protein | ... 3821 0.0
AT5G59700.1 | Symbols: | Protein kinase superfamily protein | ... 209 9e-53
AT3G46290.1 | Symbols: HERK1 | hercules receptor kinase 1 | chr... 185 2e-45
> AT5G61350.1 | Symbols: | Protein kinase superfamily protein
| chr5:24667973-24670501 FORWARD LENGTH=2529
Length=2529
Score = 3821 bits (2069), Expect = 0.0
Identities = 2373/2523 (94%), Gaps = 8/2523 (0%)
Strand=Plus/Plus
Query 22 ATGGGAGGAGAGTTTCGTCATTTCTCCTCCCACGTGTCTCTTCTCCTCCTCCTCTTTCTC 81
||||||||||| ||||||||||||||||||||||| ||||| ||||||||| || |||||
Sbjct 1 ATGGGAGGAGATTTTCGTCATTTCTCCTCCCACGTTTCTCTCCTCCTCCTCTTCCTTCTC 60
Query 82 GTCGTCAAATCCAGCTCCTCATTTACTCCAGCTGATAATTACCTCATCGATTGTGGTTCC 141
||||||||||||| || ||||| |||||||||||||| ||||||||||||||||| |||
Sbjct 61 ATCGTCAAATCCAGTTCTTCATTCACTCCAGCTGATAACTACCTCATCGATTGTGGCTCC 120
Query 142 TCCGGCGAAACAAAACTCTCCGACGGTCGTAATTTCAAATCCGATCAACAATCCGTCGCG 201
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TCCGACGAAACAAAACTCTCCGACGGTCGTAATTTCAAATCCGATCAACAATCCGTCGCG 180
Query 202 TTTCTTCAAACAGACGAAGACATCAAAACCTCTGTCGACTCAATCCCGATCTCCGACTCC 261
|||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||||
Sbjct 181 TTTCTTCAAACAGATGAAGACATCAAAACCTCCGTCGACTCAATTCCGATCACCGACTCT 240
Query 262 AATTCTAGTACCCTTCCCTTATACTTAACCGCTCGAATCTTCGCCGGAAAATCAACTTAC 321
||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 241 AATGCCAGTACCCTTCCCTTATACTTAACCGCTAGAATCTTCGCCGGAAAATCAACTTAC 300
Query 322 TCTTTCTACATTTCACGACCTGGTCGTCACTGGATCCGCCTCCATTTTTATCCTCTCAAT 381
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 301 TCCTTCTACATTTCACGACCTGGTCGTCACTGGATCCGTCTCCATTTTTATCCTCTCAAT 360
Query 382 CATCCTCTATACAATCTCACAAACTCCGTCTTCTCCGTCACCACCGACACCACCGTTCTC 441
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 361 CATCCTCTCTACAATCTAACAAACTCCGTCTTCTCCGTCACCACCGACACCACCGTCCTC 420
Query 442 TTACACGATTTCTCCGCCGGAGATACTTCTTCGATCGCCTTCAAAGAATATCTAATCTAC 501
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 421 TTACACGATTTCTCCGCCGGAGATACTTCTTCTATCGTCTTCAAAGAATATCTAATCTAC 480
Query 502 GCCGCCGAGAAACTCTCTCTCTATTTCAAACCACATAAAGGCTCCACAGCTTTTATCAAC 561
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 481 GCCGCAGAGAAACTCTCTCTTTATTTCAAACCACATAAAGGCTCCACCGCTTTTATCAAC 540
Query 562 GCCGTTGAAATCGTCTCCGTTCCCGACGAGCTTGTCCCGGATTCTGCTTCCTCTGTTCCT 621
||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct 541 GCCGTTGAAATCGTCTCTGTTCCGGACGAGCTTGTTCCGGACTCTGCTTCCTCTGTTCCT 600
Query 622 CAAGCTCCTGATTTCAAAGGCTTAAGCAGCTTCTCTCTTGAGATCCTTCACCGGATAAAC 681
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 601 CAAGCTCCTGATTTCAAAGGCTTAAGTAGCTTCTCTCTTGAGATCCTTCATCGGATAAAT 660
Query 682 ATTGGCGGCGATTTGATTTCTCCGAAAATTGATCCTCTCTCACGCACTTGGCTCTCTGAT 741
|| || || ||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 661 ATCGGAGGAGATTTGATTTCTCCGAAGATAGATCCTCTCTCACGCACTTGGCTCTCTGAT 720
Query 742 AAACCTTACAATTCGTTCCCTGAAGGTTCGAGAAATGTCACCGTTGATCCAAGTACGATT 801
|||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 721 AAACCTTACAATACGTTCCCTGAAGGTTCGAGAAATGTCACTGTTGATCCTAGTACGATT 780
Query 802 ACTTATCCAGACGGCGGAGCCACGGCGTTGATTGCTCCTAATCCGGTTTATGCCACGGCG 861
|||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| |||
Sbjct 781 ACTTATCCAGACGGTGGAGCTACGGCGTTGATCGCTCCTAATCCGGTTTACGCCACCGCG 840
Query 862 GAGGAAATGGCGGATGCACAAACCTCGCAACCTAATTTCAATCTTTCATGGAGAATGAGC 921
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 841 GAGGAAATGGCCGATGCACAAACCTCGCAACCTAATTTCAATCTCTCATGGAGAATGAGT 900
Query 922 GTTGATTTTGGTCATGATTACTTCATTAGGCTACATTTTTGTGACATTGTAAGCAAATCG 981
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 901 GTTGATTTTGGTCATGATTACTTCATTAGGTTACATTTTTGTGACATTGTAAGCAAATCG 960
Query 982 CTCAACGATCTTGTCTTCAATGTTTTCATCAACAAGCTCTCTGCAATCTCCGCACTTGAT 1041
|| ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 961 CTTAACGACCTTATCTTCAATGTTTTCATCAACAAGCTCTCTGCAATCTCTGCACTTGAC 1020
Query 1042 CTCTCTTCACTAACCAACGCTTTAGGCACCGCGTATTACGCGGATTTTGTGCTTAATGCG 1101
||||| |||||||||| ||||||||| || ||||||||||||||||| ||||||||||||
Sbjct 1021 CTCTCCTCACTAACCAGCGCTTTAGGTACAGCGTATTACGCGGATTTCGTGCTTAATGCG 1080
Query 1102 TCTACGATCACCAATGGCTCGATCTTGGTCCAAGTTGGTCCTACTCCGAGTCTTCAGTCG 1161
||||||||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||
Sbjct 1081 TCTACGATCACCAATGGTTCGATCTTGGTTCAGGTTGGTCCGACTCCGAATCTTCAGTCG 1140
Query 1162 GGTAAACCGAATGCCATTCTTAACGGTTTAGAGATCATGAAGCTGAACAATGCTGCCGGG 1221
|||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1141 GGTAAACCGAATGCGATACTTAACGGTTTAGAGATCATGAAGCTGAACAATGCTGCTGGG 1200
Query 1222 AGTTTAGATGGGCTTTTCGGGGTTGATGGGAAATACAAAGGACCTATTGGTGGGATGTCC 1281
||||||||||| ||||| || ||||||||||||||||||||||| || ||||| |||||
Sbjct 1201 AGTTTAGATGGACTTTTTGGAGTTGATGGGAAATACAAAGGACCGATCGGTGGTATGTCA 1260
Query 1282 TCTAAAAAGCTTGCTATTGCGGGTATCGGATTTGTGATGGCGCTAACCGCATTGTTAGGG 1341
||||| |||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct 1261 TCTAAGAAGCTTGCTATTGCGGGTATTGGGTTTGTGATGGCGCTAACCGCTTTCTTAGGG 1320
Query 1342 GTTGTCGTGTTGCTTGTTAGATGGCAGAGACGTCCTAAAGACTGGCAAAAACAGAATAGT 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 GTTGTCGTGTTGCTTGTTAGATGGCAGAGACGTCCTAAAGACTGGCAAAAACAGAATAGT 1380
Query 1402 TTCTCGTCATGGTTGCTTCCTTTGCACGCAAGTCACTCGAGTTACATCTCAAGCAAAGGC 1461
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1381 TTCTCGTCATGGTTGCTTCCTTTACACGCAAGTCACTCGAGTTACATCTCGAGCAAAGGC 1440
Query 1462 GGGTCTACGTCGAGGCGGATGAGCATTTTCGGGTCAAAGAAAAGCAAAAGCAATGGATTC 1521
||||| ||||||||||||||||| ||||||||||||||||| || || ||||||||||||
Sbjct 1441 GGGTCAACGTCGAGGCGGATGAGTATTTTCGGGTCAAAGAAGAGTAAGAGCAATGGATTC 1500
Query 1522 TCTAGCTTCTTCTCGAACCAAGGATTAGGACGGTACTTTCCCTTTACTGAACTACAGATC 1581
|||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||| |
Sbjct 1501 TCTAGCTTCTTCTCAAACCAGGGATTAGGTCGGTACTTTCCCTTTACCGAACTACAGACC 1560
Query 1582 GCTACGCAAAATTTTGATGAGAATTCTGTGAT-TGGAGTCGGAGGATTCGGAAAAGTCTA 1640
|| || ||||||||||| |||||| ||||| | |||||||||||||||||||||||||||
Sbjct 1561 GCGACACAAAATTTTGACGAGAATGCTGTG-TGTGGAGTCGGAGGATTCGGAAAAGTCTA 1619
Query 1641 CATAGGAGAAATTGATGGTGGGACGCAGGTCGCGATCAAAAGAGGGAGTCAGAGTTCAGA 1700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1620 CATAGGAGAAATTGATGGTGGGACGCAGGTCGCGATCAAAAGAGGGAGTCAGAGTTCGGA 1679
Query 1701 GCAAGGAATAAACGAGTTTCAGACGGAGATTCAGATGCTGTCCAAACTTAGGCACAGACA 1760
||||||||| ||||||||||| || |||||||||||| |||||||||| || || |||||
Sbjct 1680 GCAAGGAATCAACGAGTTTCAAACAGAGATTCAGATGTTGTCCAAACTCAGACATAGACA 1739
Query 1761 TTTGGTGTCTTTAATCGGATTTTGCGATGAAAACAAAGAGATGATTCTCGTATACGAATA 1820
|||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1740 TTTGGTTTCTCTAATCGGATTTTGCGATGAAAACAAAGAGATGATTCTCGTCTACGAATA 1799
Query 1821 CATGTCAAACGGTCCTCTGCGTGACCATCTATACGGCTCCAAAGAGAATGACCCCAACCC 1880
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct 1800 CATGTCAAACGGTCCTCTGCGTGACCATCTCTACGGCTCCAAAGAAAATGACCCTAACCC 1859
Query 1881 TATTCCTACTTTATCCTGGAAGCAACGTCTAGAGATCTGCATTGGATCAGCGCGTGGACT 1940
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1860 TATTCCTACCTTGTCCTGGAAGCAACGTCTAGAGATCTGCATTGGATCAGCGCGTGGACT 1919
Query 1941 CCACTATCTCCACACGGGTGCAGCACAAGGAATCATCCACCGCGACGTTAAGACCACTAA 2000
|||||||||||||||||||||||| || || ||||||||||||||||| |||||||| ||
Sbjct 1920 CCACTATCTCCACACGGGTGCAGCGCAGGGGATCATCCACCGCGACGTCAAGACCACCAA 1979
Query 2001 CATTCTCTTGGACGAGAACCTAGTCGCTAAAGTTTCTGATTTTGGACTTTCAAAAGATGC 2060
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1980 CATCCTCTTGGACGAGAACCTAGTCGCTAAAGTTTCTGATTTTGGACTTTCAAAAGATGC 2039
Query 2061 CCCTATGGAACAAGGGCATGTAAGTACGGCGGTGAAA-GGTAGTTTCGGGTATTTAGACC 2119
|||||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||
Sbjct 2040 GCCTATGGATGAAGGGCATGTAAGTACCGCGGT-AAAGGGTAGTTTCGGGTATTTAGACC 2098
Query 2120 CCGAGTACTTCCGCAGACAACAACTCACTGATAAATCTGATGTTTACTCGTTCGGTGTGG 2179
|||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 2099 CCGAATACTTCCGCAGACAACAACTCACTGATAAATCCGATGTTTACTCATTCGGTGTGG 2158
Query 2180 TGTTATTCGAGGTTCTTTGCGCGAGGCCAGTGATAAACCCACAGTTACCTAGAGAACAAG 2239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2159 TGTTATTCGAGGTTCTTTGCGCGAGGCCAGTGATAAACCCACAGTTACCTAGAGAACAAG 2218
Query 2240 TTAACTTAGCAGAATATGCTATGAATTTGCATAGAAAAGGTATGTTGGAGAAAATCATCG 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2219 TTAACTTAGCAGAATATGCTATGAATTTGCATAGAAAAGGTATGTTGGAGAAAATCATCG 2278
Query 2300 ATCCC-AAAATCGTGGGAACAATTAGTAAAGGGTCGTTAAGAAAATTCGTGGAGGCTGCA 2358
| ||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct 2279 A-CCCGAAAATCGTGGGAACGATTAGTAAAGGATCGTTAAGGAAATTCGTGGAGGCTGCA 2337
Query 2359 GAGAAATGTTTGGCTGAGTACGGTGTTGATCGGCCTGGAATGGGAGATGTGTTGTGGAAT 2418
|| ||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 2338 GAAAAATGTTTGGCAGAGTACGGTGTTGATCGACCGGGAATGGGAGATGTGTTGTGGAAT 2397
Query 2419 CTTGAATATGCTTTGCAACTTCAAGAAGCGTCGGCTCAAGTTGATTTGTCGGAGGATAAA 2478
||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||
Sbjct 2398 CTTGAATATGCTTTGCAGCTTCAAGAAGCATCGGCTCAAGTTGATTTATCGGAGGATAAG 2457
Query 2479 ACTACAATGAATATTGAAATGGAC-TATATTCCCGGCGAGGAAATGCAAACTCCATCGCA 2537
|||||||||||||||||||||||| | |||||||||||||||||||||| |||| |||||
Sbjct 2458 ACTACAATGAATATTGAAATGGACCT-TATTCCCGGCGAGGAAATGCAATCTCCGTCGCA 2516
Query 2538 TTC 2540
|||
Sbjct 2517 TTC 2519
> AT5G59700.1 | Symbols: | Protein kinase superfamily protein
| chr5:24052385-24055425 REVERSE LENGTH=2861
Length=2861
Score = 209 bits (113), Expect = 9e-53
Identities = 435/583 (75%), Gaps = 52/583 (9%)
Strand=Plus/Plus
Query 1897 TGGAAGCAACGTCTAGAGATCTGCATTGGATCAGCGCGTGGACTCCACTATCTCCACACG 1956
|||||||||||||| ||||| |||||||||||||| | ||| | || |||||||||||
Sbjct 1872 TGGAAGCAACGTCTTGAGATATGCATTGGATCAGCAAGAGGATTGCATTATCTCCACACC 1931
Query 1957 GGTGCA-GC-ACAAGGAATCATCCACCGCGACGTTAAGA-CCACTAACAT-TCT-CTTGG 2011
|||| | || | || | || ||| | ||||| || | || | ||||| | | ||| |
Sbjct 1932 GGTG-ACGCGA-AACCCGTGATTCACAGAGACGTCAA-ATCCGCCAACATAT-TGCTT-G 1986
Query 2012 ACGAGAACCT-AGTCGCTAAAGTTTCTGATTTTGGACTTTCAAAAGA--TG-CC-CCTAT 2066
||||||| || | | ||||||||| | || |||||||| || |||| | || ||
Sbjct 1987 ACGAGAATCTCA-TGGCTAAAGTTGCAGACTTTGGACTGTC-TAAGACCGGACCGGAGAT 2044
Query 2067 GGAACAAG-GGCATGTAAGTACGGCGGTGAAAGGTAGTTTCGGGTAT-TTAGACCCCGAG 2124
|| | || ||||| ||||| ||||| ||||| |||||||| ||| || || || ||
Sbjct 2045 CGATC-AGACTCATGTGAGTACCGCGGTCAAAGGAAGTTTCGGATATCTT-GATCCAGAA 2102
Query 2125 TACTTCCGCAGACAACAACTCACTGATAAATCTGATGTTTACTCGTTCGGTGTGGTGT-T 2183
|||||| | |||||||| ||||| || ||||| ||||||||||| || || ||||| | |
Sbjct 2103 TACTTCAGAAGACAACAGCTCACAGAGAAATCAGATGTTTACTCTTTTGGAGTGGT-TAT 2161
Query 2184 ATTCGAGGTTCTTTGCGCGAGGCCAGTGATAAACCC-ACAGTTACCTAGAGAACA-AGTT 2241
||||||||||| |||||||| || || ||| |||| ||| ||| |||||||| | ||
Sbjct 2162 GTTCGAGGTTCTCTGCGCGAGACCTGTTATAGACCCGACACTTA-CTAGAGAA-ATGGTG 2219
Query 2242 AACT-TAGCAGAATATGCTATGAATTTGCA-TAGAAAAGGTA-TG-TTGGAGA-AAATCA 2296
|| | |||| |||| || ||||| | ||| || ||||| | | || || | | ||||
Sbjct 2220 AA-TCTAGCGGAATGGGCAATGAAATGGCAGAAG-AAAGG-ACAGCTT-GA-ACACATCA 2274
Query 2297 TCGATCCC-AAAAT-CGTGGG-AACAATTAGTA-AAGGGTCG-TTAAGAAAATTC-GTGG 2350
|||| ||| | | || ||| || || || | | ||| || ||||| ||| || |
Sbjct 2275 TCGA-CCCGTCACTGCG-GGGTAA-GATCAG-ACCTGACTCGCTT-AGAAAGTTCGGT-G 2328
Query 2351 AGGCTGCAGAGAAATGTTTGGCTGAGTACGGTGTTGATCGGCC-TGGAATGGGAGATGTG 2409
| | | ||||||||||| ||||| || || || ||| | || | |||||||||||||
Sbjct 2329 AAACAGGGGAGAAATGTTTAGCTGACTATGGAGTCGATAGACCAT-CAATGGGAGATGTG 2387
Query 2410 TTGTGGAATCTTGAATATGCTTTGCAACTTCAAGAAGC-GTCG 2451
||||||||||||||||| |||||||| || |||||||| ||||
Sbjct 2388 TTGTGGAATCTTGAATACGCTTTGCAGCTACAAGAAGCTGTCG 2430
> AT3G46290.1 | Symbols: HERK1 | hercules receptor kinase 1 | chr3:17012728-17015885
FORWARD LENGTH=3032
Length=3032
Score = 185 bits (100), Expect = 2e-45
Identities = 432/584 (74%), Gaps = 56/584 (10%)
Strand=Plus/Plus
Query 1897 TGGAAGCAACGTCTAGAGATCTGCATTGGAT-CAGCGCGTGGAC-TCCACTATCTCCACA 1954
||||| ||||| || |||||||||||||| | |||| | || | | || || || ||||
Sbjct 1893 TGGAAACAACGGCTTGAGATCTGCATTGG-TGCAGCTAGAGG-CTTGCATTACCTTCACA 1950
Query 1955 CGGGTGCAGCAC--AA--GGAATCATCCACCGCGACGTTAAGA-CCACTAACAT-TCT-C 2007
|||||| | | | || || |||| ||| | ||||| || | | | ||||| | | |
Sbjct 1951 CGGGTG-A-CTCGAAACCGG--TCATTCACAGAGACGTGAA-ATCTGCAAACATAT-TGC 2004
Query 2008 TTGGACGAGAACCT-AGTCGCTAAAGTTTCTGATTTTGGACTTTCAAAAGA-T-GCCCCT 2064
|| ||||||||| | | | ||||||||| | || |||||||| || |||| | | |||
Sbjct 2005 TT-GACGAGAACTTCA-TGGCTAAAGTTGCAGACTTTGGACTGTC-CAAGACTGGACCCG 2061
Query 2065 A--TGGAACAAG-GGCATGTAAGTACGGCGGTGAAAGGTAGTTTCGGGTAT-TTAGACCC 2120
| | || | || ||||||||||| || || ||||| ||||| || ||| || |||||
Sbjct 2062 AGCTTGATC-AGACTCATGTAAGTACTGCTGTCAAAGGAAGTTTTGGTTATCTT-GACCC 2119
Query 2121 CGAGTACTTCCGCAGACAACAACTCACTGATAAATCTGATGTTTACTCGTTCGGTGTGGT 2180
|||||||||| | || ||||| ||||| |||||||| |||||||| || ||||| || ||
Sbjct 2120 CGAGTACTTCAGAAGGCAACAGCTCACAGATAAATCCGATGTTTATTCCTTCGGAGTTGT 2179
Query 2181 GT-TATTCGAGGTTCTT-TGCGCGAGGCCAGTGATAAACCC-ACAGTTACCTAGAGAACA 2237
| | ||||||||| || || || || || || ||| |||| ||| || || |||| | |
Sbjct 2180 -TCTCTTCGAGGTT-TTATGTGCTAGACCTGTTATAGACCCAACACTT-CCAAGAG-AGA 2235
Query 2238 -AGTTAA-CTTAGCAGAATATGCTATGAATTTGCA-TAGAAAAGGTATGTTGGAGAAAAT 2294
|| || ||| ||||||| |||||||| | ||| ||||| || | |||| | ||
Sbjct 2236 TGGTGAATCTT-GCAGAATGGGCTATGAAATGGCAGAAGAAAGGGCA-ACTGGATCAGAT 2293
Query 2295 CATCGATCCCAAAATCG--T-G-GGAACA-ATTAGTA-AAGGGTCGTTAAGAAAATTCGT 2348
|||||| || | ||| | | |||| | || || | | |||||||| ||||| |
Sbjct 2294 CATCGA--CC--AGTCGCTTCGCGGAA-ATATCAG-ACCCGATTCGTTAAGGAAATTTGC 2347
Query 2349 GGAGGCTGCAGAGAAATGTTTGGCTGAGTACGGTGTTGATCGGCC-TGGAATGGGAGATG 2407
||| | | ||||||||||| || || || || |||||| |||| | ||||||||||
Sbjct 2348 GGAAACAGGTGAGAAATGTTTAGCGGATTATGGAGTTGATAGGCCAT-CTATGGGAGATG 2406
Query 2408 TGTTGTGGAATCTTGAATATGCTTTGCAACTTCAAGAAGC-GTC 2450
||||||||||||||||||| ||| |||| ||||||||||| |||
Sbjct 2407 TGTTGTGGAATCTTGAATACGCTCTGCAGCTTCAAGAAGCAGTC 2450
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 127574536049
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5