BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg950897 Length=886 Score E Sequences producing significant alignments: (Bits) Value AT5G61410.1 | Symbols: RPE, EMB2728 | D-ribulose-5-phosphate-3-... 1448 0.0 > AT5G61410.1 | Symbols: RPE, EMB2728 | D-ribulose-5-phosphate-3-epimerase | chr5:24683606-24686105 REVERSE LENGTH=1408 Length=1408 Score = 1448 bits (784), Expect = 0.0 Identities = 852/885 (96%), Gaps = 3/885 (0%) Strand=Plus/Plus Query 2 TTGAATCTTTGATT-CGGACATGTCGACCTCCGCCGCTTCCTTGTGTTGTTCATCAACCC 60 |||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 250 TTGAGTCTTTGATTAGGGACATGTCAACCTCCGCCGCTTCCTTGTGTTGTTCATCAACCC 309 Query 61 AGGTCAATGGGTTTGGTCTTAGGCCTGAAAGGTCGCTTCTTTACCAACCCACTTCGTTTT 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 310 AGGTCAATGGGTTTGGTCTTAGGCCTGAAAGGTCGCTTCTTTACCAACCCACTTCCTTTT 369 Query 121 CTTTCTCCAGAAGGAGAAGTCATGGAATTGTCAAGGCCTCAGCTCGGGTTGATAAGTTTT 180 |||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||| Sbjct 370 CTTTCTCCAGAAGGAGAACTCATGGAATTGTCAAGGCCTCATCTCGGGTTGATAGGTTTT 429 Query 181 CCAAAAGTGATATCATTGTTTCTCCCTCAATTCTCTCGGCTAATTTCGCCAAATTAGGCG 240 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 430 CGAAAAGTGATATCATTGTTTCTCCCTCTATTCTCTCGGCTAATTTCGCCAAATTAGGCG 489 Query 241 AGCAGGTAAAAGCAGTGGAGTTGGCAGGTTGTGATTGGATTCATGTTGATGTGATGGATG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 490 AGCAGGTAAAAGCAGTGGAGTTGGCAGGTTGTGATTGGATTCATGTTGATGTCATGGACG 549 Query 301 GTCGTTTTGTTCCCAACATTACTATCGGACCTCTCGTGGTTGATGCTTTGCGCCCTGTGA 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 550 GTCGTTTTGTTCCCAACATTACTATCGGACCTCTCGTGGTTGATGCTTTGCGCCCTGTGA 609 Query 361 CAGATCTTCCGTTGGATGTTCATCTTATGATAGTGGAACCCGAGCAGAGAGTACCGGATT 420 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 610 CAGATCTTCCTTTGGATGTTCATCTGATGATAGTGGAACCCGAGCAGAGAGTACCGGATT 669 Query 421 TCATCAAAGCAGGTGCAGATATAGTCAGTGTACATTGTGAACAGCAATCGACTATCCATT 480 |||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||| Sbjct 670 TCATCAAAGCAGGTGCAGATATTGTCAGTGTACATTGTGAACAGCAATCCACCATCCATT 729 Query 481 TGCATCGTACCGTCAATCAAATAAAAAGCTTAGGGGCTAAAGCTGGAGTTGTCCTAAACC 540 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 730 TGCATCGTACCGTCAATCAAATAAAAAGCTTAGGGGCTAAAGCTGGAGTTGTTCTAAACC 789 Query 541 CTGGAACCCCATTGACTGCAATAGAATATGTCTTGGATGTTGTGGATCTGGTCTTGATCA 600 ||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||| Sbjct 790 CTGGAACCCCATTGAGTGCAATAGAATATGTCTTGGATATGGTGGATCTGGTCTTGATCA 849 Query 601 TGTCGGTCAACCCCGGTTTTGGTGGACAGAGCTTTATCGAAAGCCAAGTAAAGAAAATCT 660 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 850 TGTCGGTCAACCCTGGTTTTGGTGGACAGAGCTTTATTGAAAGCCAAGTAAAGAAAATCT 909 Query 661 CGGACTTGAGAAAAATGTGTGCAGAAAAGGGAGTAAACCCATGGATTGAAGTTGATGGTG 720 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 910 CGGACTTGAGGAAAATGTGTGCAGAGAAGGGAGTAAACCCATGGATTGAAGTTGATGGTG 969 Query 721 GTGTCACTCCAGCGAACGCTTACAAGGTTATTGAGGCTGGAGCAAATGCTCTAGTGGCTG 780 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 970 GTGTCACTCCAGCGAATGCGTACAAGGTTATTGAGGCTGGAGCAAATGCTCTAGTGGCTG 1029 Query 781 GATCAGCTGTATTTGGAGCTAAGGACTACGCAGAAGCTATAAAAGGAATTAAGGCCAGCA 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1030 GATCAGCTGTATTTGGAGCTAAGGACTACGCAGAAGCTATAAAAGGAATTAAGGCCAGCA 1089 Query 841 AGAGG-CCAGAAGCTGTAGCTGTGTAATGTGAAGAAACAACAAGC 884 | | | |||| ||||||||||||||||||||||| |||| ||||| Sbjct 1090 A-ACGACCAGCAGCTGTAGCTGTGTAATGTGAAGCAACAGCAAGC 1133 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43251600567 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5