BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg951140 Length=1732 Score E Sequences producing significant alignments: (Bits) Value AT5G63380.1 | Symbols: | AMP-dependent synthetase and ligase f... 2739 0.0 > AT5G63380.1 | Symbols: | AMP-dependent synthetase and ligase family protein | chr5:25387411-25390063 REVERSE LENGTH=1896 Length=1896 Score = 2739 bits (1483), Expect = 0.0 Identities = 1643/1722 (95%), Gaps = 4/1722 (0%) Strand=Plus/Plus Query 13 TCTTCAAGAATGCAGACGAAAAACAACGACAGCCGTTCGATTGACCGGAGCTCCGGCTTC 72 ||||| ||||||| |||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 29 TCTTCCAGAATGCTGACGAAAACCAACGACAGCCGTTTGATTGACCGGAGCTCCGGCTTC 88 Query 73 GATCAACGGACAGGAATTTATCACAGTCTTCG-CCCTTCTCTTTCTCTACCTCCTATAGA 131 ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| Sbjct 89 GATCAACGGACAGGAATCTATCACAGTCTTCGTCCC-TCTCTTTCTCTACCTCCTATAGA 147 Query 132 TCAACCTCTCTCCACCGCCGAATTCGCACTTTCTCTGCTCCGCAAATCCTCACCACCAGC 191 ||||||||||||| ||||||||||||| |||||||| || | ||||||||||||||| || Sbjct 148 TCAACCTCTCTCCGCCGCCGAATTCGCGCTTTCTCTCCTACTCAAATCCTCACCACCTGC 207 Query 192 CACCGCCGGGAAAAACATTGAAGCCTTAACCTTCCTAGTTAACTCGAGCTCTGGTGATAG 251 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 208 CACCGCCGGGAAAAACATTGAAGCCTTAACCTACCTAGTTAACTCGAGCTCTGGTGATAA 267 Query 252 CCTCACTTATGGAGAGCTTCTTCGTGGAGTTCGTTCTCTTGCTGTATCTCTCCGGGAGCG 311 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 268 CCTCACTTATGGAGAGCTTCTTCGTAGAGTTCGTTCTCTTGCTGTATCTCTCCGGGAGCG 327 Query 312 ATTTCCTTCTCTTTCCTCCAGAAATGTCGCTTTTATCCTCTCTCCACCTTCGCTGCACAT 371 ||||||||||||| ||||||||||||||||||||||||||||||| ||||| || |||| Sbjct 328 ATTTCCTTCTCTTGCCTCCAGAAATGTCGCTTTTATCCTCTCTCCTTCTTCGTTGGACAT 387 Query 372 ACCAGTGCTTTACTTAGCTTTAATGTCGATCGGTGTTGTTGTTTCACCGGCGAACCCAAT 431 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 388 ACCAGTGCTTTACTTAGCTTTGATGTCGATCGGTGTTGTTGTTTCACCGGCGAACCCAAT 447 Query 432 CGGATCTGAATCAGAGGTGAGTCATCAGGTTGAAGTCAGTGAACCAGTAATTGCGTTCGC 491 |||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 448 CGGATCTGAATCGGAGGTGAGTCATCAAGTCGAAGTCAGTGAACCAGTAATTGCGTTCGC 507 Query 492 GACATCGCAGACGGTTAAGAAGCTTCGGTCCTCATCTTTCCCTCTCGGAATC-GTTCTGA 550 |||||||||||||||||||||||||| ||||| ||||| |||||||||| | ||||||| Sbjct 508 GACATCGCAGACGGTTAAGAAGCTTCAATCCTCTTCTTTGCCTCTCGGAA-CTGTTCTGA 566 Query 551 TGGACTCGCCTGAGTTTCTCTCCTGGTTAAATCGATCGGATGCTTCATCGGTTAATCCAT 610 |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 567 TGGACTCGACTGAGTTTCTCTCCTGGTTAAATCGATCGGATTCTTCATCGGTTAATCCAT 626 Query 611 TTCAGGTTCGGGTCAACCAATCGGACCCTGCCGCAATCCTCTTTTCGTCTGGAACTACCG 670 ||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| |||| Sbjct 627 TTCAGGTTCAGGTCAACCAATCGGACCCTGCCGCTATCCTCTTTTCCTCTGGAACAACCG 686 Query 671 GGCGGGTCAAAGGCGTTTTGATCACTCACCGTAACCTAATCGCCTCGACCGCCGTGTCTC 730 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 687 GGCGGGTCAAAGGCGTTTTGCTCACTCACCGTAACCTAATCGCCTCGACCGCCGTATCTC 746 Query 731 ACCAACGGACTCTCCAAGATCCGGTTGATTATGATCGCGTTGGACTGTTCTCGCTTCCGC 790 |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| Sbjct 747 ACCAACGGACTCTCCAAGATCCGGTTAATTACGATCGCGTTGGACTGTTCTCGCTTCCGC 806 Query 791 TCTTCCACGTGTTTGGCTTCACGATGATGATTCGAGCCATCTCGCTTGGAGACACGCTGG 850 |||||||||||||||| |||| |||||||||||||||||||||||||||||| || ||| Sbjct 807 TCTTCCACGTGTTTGGTTTCATGATGATGATTCGAGCCATCTCGCTTGGAGAGACATTGG 866 Query 851 TGCTTTTAGGGAGATTCGAGCTTGAGGCGATGTTAAAGGCGGTGGAGAAATATAAGGTTA 910 |||||||||||||||| || || ||||||||||| ||||||||||||||||||||||||| Sbjct 867 TGCTTTTAGGGAGATTTGAACTCGAGGCGATGTTTAAGGCGGTGGAGAAATATAAGGTTA 926 Query 911 CTGGTATGCCTGTATCTCCTCCGTTGATTGTAGCATTGGTCAAATCGGAGCTAACGAAGA 970 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 927 CTGGTATGCCTGTATCTCCTCCGTTGATTGTAGCGTTGGTCAAATCGGAGCTCACGAAGA 986 Query 971 AGTACGATCTCCGGTCGTTGCGTTCTCTTGGCTGCGGCGGCGCTCCACTCGGCAAAGACA 1030 ||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||| Sbjct 987 AGTACGATCTCCGGTCGTTGCGTTCCCTTGGCTGCGGAGGAGCTCCACTCGGCAAAGACA 1046 Query 1031 TCGCAGAGAGGTTCAAGCAGAAATTCCCAGATGTGGAAATTGTACAGGGCTATGGCTTGA 1090 ||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||| Sbjct 1047 TCGCAGAGAGGTTTAAGCAGAAATTCCCAGATGTAGATATTGTACAGGGCTATGGCTTGA 1106 Query 1091 CGGAGAGCTCGGGGCCAGCTGCGTCAACTTTTGGACCTGAAGAGACGGTAAAATATGGCT 1150 | ||||||||||| |||||||| ||||| |||||||||||||||| |||||||||||||| Sbjct 1107 CAGAGAGCTCGGGACCAGCTGCCTCAACGTTTGGACCTGAAGAGATGGTAAAATATGGCT 1166 Query 1151 CAGTTGGTCGTATCTCTGAGAATTTGGAAGCCAAAATTGTTGATCCATCCACCGGAGAAG 1210 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1167 CAGTTGGTCGTATCTCTGAGAATATGGAAGCCAAAATTGTTGATCCATCCACCGGAGAAT 1226 Query 1211 CCTTGCCACCGGGAAAAACCGGTGAACTATGGCTCCGAGGACCAGTCATCATGAAAGGTT 1270 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 1227 CCTTGCCACCGGGAAAAACTGGTGAACTCTGGCTCCGAGGACCAGTCATCATGAAAGGTT 1286 Query 1271 ATGTGGGAAACGAGAAAGCGAGTGCGGAGACAGTAGACGAAGAAGGGTGGTTAAAGACTG 1330 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1287 ATGTGGGAAACGAGAAAGCGAGTGCGGAGACAGTAGACAAAGAAGGGTGGTTAAAGACTG 1346 Query 1331 GTGATCTCTGTTATTTTGATGCGGAAGGTTTTCTATATATTGTTGATCGGCTAAAGGAAC 1390 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| | Sbjct 1347 GTGATCTCTGTTATTTTGATTCGGAAGATTTTCTATATATTGTTGATCGGCTAAAGGAGC 1406 Query 1391 TAATCAAATACAAGGCTTATCAGGTTCCACCGGTAGAGTTGGAGCAGATTCTTCACTCGA 1450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1407 TAATCAAATACAAGGCTTATCAGGTTCCACCGGTAGAGTTGGAGCAGATTCTTCACTCGA 1466 Query 1451 ATCCAGATGTGATTGATGCTGCAGTTGTTCCGTTCCCTGACGAGGATGCAGGAGAGATTC 1510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1467 ATCCAGATGTGATTGATGCTGCAGTTGTTCCGTTCCCTGACGAGGATGCAGGAGAGATTC 1526 Query 1511 CAATGGCTTTCATAGTGAGAAAACCAGGAAGCAATCTCAACGAAGCGCAAATCATTGATT 1570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1527 CAATGGCTTTCATAGTGAGAAAACCAGGAAGCAATCTCAACGAAGCGCAAATCATTGATT 1586 Query 1571 TCGTAGCTAAACAAGTTGCTCCGTACAAGAAGGTAAGACGAGTTGCTTTCATAAATGCAA 1630 ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 1587 TCGTAGCTAAACAAGTTACTCCGTACAAGAAGGTAAGACGAGTTGCTTTTATAAATGCAA 1646 Query 1631 TCCCAAAAAATCCTGCTGGCAAGATTCTGCGTCGGGAACTTACTAAAATCGCCGTGGATG 1690 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 1647 TCCCAAAAAATCCTGCTGGCAAGATTCTGCGTCGGGAGCTTACTAAAATCGCTGTGGATG 1706 Query 1691 GCAATGCATCAAAGCTTTGAGATAACCGGCCGGCTCAGATAT 1732 ||||||||||||| |||||||||||||||| || ||| |||| Sbjct 1707 GCAATGCATCAAAACTTTGAGATAACCGGCTGGTTCATATAT 1748 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85642129770 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5