BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg951288 Length=293 Score E Sequences producing significant alignments: (Bits) Value AT5G64552.1 | Symbols: CPuORF22 | conserved peptide upstream op... 171 4e-42 AT5G64550.1 | Symbols: | loricrin-related | chr5:25801528-2580... 171 4e-42 > AT5G64552.1 | Symbols: CPuORF22 | conserved peptide upstream open reading frame 22 | chr5:25801528-25804980 REVERSE LENGTH=2533 Length=2533 Score = 171 bits (92), Expect = 4e-42 Identities = 102/106 (96%), Gaps = 3/106 (3%) Strand=Plus/Plus Query 191 TCTTGAAGATGGACAGGGCAGATACATGGGGATTTGTCAGTGGTGGGAGATGTTTATATC 250 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 199 TCTTGAAGATGGACAGGGCAGATACATGGGGATTTGTCAGCGGTGGGAGATGTTTATATC 258 Query 251 TCAAGTTGCTTTTATGTTTATAGCTCTACAAGGTG-T-T-CTAAGT 293 ||||||||||||||||||||||||||||||||||| | | |||||| Sbjct 259 TCAAGTTGCTTTTATGTTTATAGCTCTACAAGGTGGTGTTCTAAGT 304 > AT5G64550.1 | Symbols: | loricrin-related | chr5:25801528-25804980 REVERSE LENGTH=2533 Length=2533 Score = 171 bits (92), Expect = 4e-42 Identities = 102/106 (96%), Gaps = 3/106 (3%) Strand=Plus/Plus Query 191 TCTTGAAGATGGACAGGGCAGATACATGGGGATTTGTCAGTGGTGGGAGATGTTTATATC 250 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 199 TCTTGAAGATGGACAGGGCAGATACATGGGGATTTGTCAGCGGTGGGAGATGTTTATATC 258 Query 251 TCAAGTTGCTTTTATGTTTATAGCTCTACAAGGTG-T-T-CTAAGT 293 ||||||||||||||||||||||||||||||||||| | | |||||| Sbjct 259 TCAAGTTGCTTTTATGTTTATAGCTCTACAAGGTGGTGTTCTAAGT 304 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13522024481 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5