BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg951411
Length=2415
Score E
Sequences producing significant alignments: (Bits) Value
AT5G65620.1 | Symbols: | Zincin-like metalloproteases family p... 4058 0.0
AT5G10540.1 | Symbols: | Zincin-like metalloproteases family p... 2490 0.0
> AT5G65620.1 | Symbols: | Zincin-like metalloproteases family
protein | chr5:26221932-26225903 FORWARD LENGTH=2514
Length=2514
Score = 4058 bits (2197), Expect = 0.0
Identities = 2336/2404 (97%), Gaps = 5/2404 (0%)
Strand=Plus/Plus
Query 4 ACGCTTGTAATAGCAAACATGTTAATGGCGACTCCAACGTCTCGAGCGTCTCTCAATCTT 63
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2 ACGCTTGTAATAGCAAACATGTTAATGGCGACTCCAACGTCTCGAGCCTCTCTCAATCTT 61
Query 64 CTTCGTCGTTCACCAAAACCCAAATATTTCTCATCTTCTTCTTGTCAATTTCGTCCCTCA 123
|||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 62 CTTCGTCGATCGCCAAAACCCAAATATTTCTCATCTTCTTCTTGTCATTTTCGTCCCTCA 121
Query 124 ACTTTTCGTAAATCATATCCTTGCCCCAtctggtcttcttctttctctttctgtctccct 183
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 122 ACTTTTCGTAAATCATATCCTTGCCCCATCTGGTCTTCTTCTTTCTCTTTTTGTCTCCCT 181
Query 184 cctcctagatccactacctccacctctctctcctcct-c-c-ttccgtcccttctcctct 240
|||||||||||||| || ||||||||||||||||||| | | ||||| ||||||||||||
Sbjct 182 CCTCCTAGATCCACCACTTCCACCTCTCTCTCCTCCTCCTCTTTCCGCCCCTTCTCCTCT 241
Query 241 cctccGTCTATGTCTTCCGCCGCCGCTGCCGCCGTAGACTCTGTTATCTCCGAGGAGACT 300
|||||||| |||||||||||||||||||||||||| || || || ||||||| ||||||
Sbjct 242 CCTCCGTCCATGTCTTCCGCCGCCGCTGCCGCCGTGGAATCCGTCGTCTCCGACGAGACT 301
Query 301 CTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGATGCC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 CTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGATGCC 361
Query 361 AGTCATGTTCGTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGGAGGAG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 AGTCATGTTCGTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGGAGGAG 421
Query 421 CTAGAGAAATCTGTGGAGCCATCGTGGCCAAATCTGGTTGAACCATTAGAGAAAATCGTT 480
||||||||||||||||||||| | |||||||| ||||| |||||||||||||||||||||
Sbjct 422 CTAGAGAAATCTGTGGAGCCAACATGGCCAAAACTGGTGGAACCATTAGAGAAAATCGTT 481
Query 481 GATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAAGCTGTTAAGGACACACCT 540
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 482 GATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAGGCTGTCAAGGACACACCT 541
Query 541 GAGCTTCGTGCTGCCATTGAAGACGTTCAGCCAGAGAAGGTGAAGTTCCAGCTCAGATTG 600
||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||| |||
Sbjct 542 GAGCTACGTGCTGCCATCGAAGACGTTCAGCCAGAGAAAGTGAAGTTCCAGCTCAGGTTG 601
Query 601 GGACAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATTGGTCA 660
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 602 GGGCAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATTGGTCA 661
Query 661 TCTCTCAGTGAAGCTCGTCAACGCTTAGTAGAAGCTCAAATTAAGGAGGCGGTTCTCATA 720
|| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 662 TCGCTCAGTGAAGCTCGTCAACGCTTAGTAGAAGCTCAAATAAAGGAGGCGGTTCTCATT 721
Query 721 GGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAACAAAATTGAACAGGAACTCGAA 780
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 722 GGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAATAAAATTGAACAGGAACTCGAA 781
Query 781 AAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCTACAAAGAAATTTGAAAAGTTG 840
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 782 AAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCAACAAAGAAATTTGAAAAGTTG 841
Query 841 ATTACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCTGCTCTCGGGCTATTCGCACAA 900
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 842 ATAACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCTGCTCTTGGGCTATTCGCACAA 901
Query 901 GCAGCTGTCTCCAAGGGCCATGAAAATGCAACTGCTGAGAATGGACCATGGATCATTACA 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 GCAGCTGTCTCCAAGGGCCATGAAAATGCAACTGCTGAGAATGGACCATGGATCATTACA 961
Query 961 CTAGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCTAAGAACCGTGCTCTGCGTGAG 1020
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 962 CTGGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCTAAAAACCGTGCTCTGCGTGAG 1021
Query 1021 GAAGTTTACCGTGCTTACCTATCTCGTGCCTCTTCTGGCGATTTGGATAATACAGCAATT 1080
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1022 GAAGTCTACCGTGCTTACCTATCTCGTGCCTCTTCTGGCGATTTGGATAATACGGCAATT 1081
Query 1081 ATCGACCAGATCTTGAAGCTTCGCTTGGAAAAAGCTAAGCTTCTTGGTTACAACAATTAC 1140
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1082 ATTGACCAGATTTTGAAGCTTCGCTTGGAAAAAGCTAAGCTTCTTGGTTACAACAATTAC 1141
Query 1141 GCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTGAGAAAGCAGCAGAGCTTTTAGAG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1142 GCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTGAGAAAGCAGCAGAGCTTTTAGAG 1201
Query 1201 AAGCTTTGTAGTGCATCTTGGGATGCGGCTGTTCAAGACATGGAAGACCTCAAGAGTTTC 1260
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1202 AAGCTTCGTAGTGCATCCTGGGATGCGGCTGTTCAAGACATGGAAGACCTCAAGAGTTTC 1261
Query 1261 GCAAAGGACCAGGGTGCAGCAGAATCTGACAGTTTGACTCACTGGGACACCACTTTCTGG 1320
|||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 1262 GCAAAGAACCAGGGTGCTGCAGAATCTGACAGTATGACTCATTGGGACACCACTTTCTGG 1321
Query 1321 AGTGAGAGGCTTCGTGAATCCAAATATGATATTAATGAGGAAGAACTACGTCCATACTTC 1380
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1322 AGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTACGTCCATACTTC 1381
Query 1381 TCACTACCAAAGGTTATGGATGGACTTTTCAGTCTAGCTAAGACACTATTTGGAATTGAT 1440
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1382 TCACTGCCAAAGGTTATGGATGGACTTTTCAGTCTAGCTAAGACACTTTTTGGAATTGAT 1441
Query 1441 ATTGAACCAGCAGATGGTTTAGCTCCGGTCTGGAACAACGATGTTCGGTTCTACCGCGTC 1500
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1442 ATTGAACCAGCAGATGGTTTAGCTCCGGTCTGGAACAATGATGTTCGGTTCTACCGCGTC 1501
Query 1501 AAAGATTCTTCTGGGAACCCAATCGCTTACTTTTACTTTGATCCATACTCTCGCCCTTCA 1560
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1502 AAAGATTCTTCTGGGAACCCAATCGCTTACTTTTACTTTGATCCATACTCTCGCCCGTCA 1561
Query 1561 GAGAAAAGAGGTGGCGCTTGGATGGATGAGGTTGTTTCCCGTAGCCGAGTCATGGCTCAG 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1562 GAGAAAAGAGGTGGCGCTTGGATGGATGAGGTTGTTTCCCGTAGCCGAGTCATGGCTCAG 1621
Query 1621 AAAGGCTCTTCTGTTAGGCTTCCTGTTGCACACATGGTCTGCAACCAAACTCCACCAGTA 1680
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1622 AAAGGCTCTTCTGTTAGGCTGCCTGTTGCACACATGGTCTGCAACCAAACTCCACCAGTA 1681
Query 1681 GGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACAGTATTTCATGAATTTGGA 1740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1682 GGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACAGTATTTCATGAATTTGGA 1741
Query 1741 CATGCTCTTCAGCACATGCTTACGAAGCAGGATGAAGGGCTAGTGGCTGGTATCCGAAAT 1800
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 1742 CATGCTCTTCAGCACATGCTTACGAAGCAGGATGAGGGGCTAGTTGCTGGTATCCGAAAT 1801
Query 1801 ATCGAGTGGGACGCAGTTGAATTACCATCACAGTTTATGGAGAATTGGTGCTACCACAGG 1860
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1802 ATCGAGTGGGACGCGGTTGAATTACCATCACAGTTTATGGAGAATTGGTGCTACCACAGG 1861
Query 1861 GACACTTTAATGAGCATTGCTAAGCATTACGAAACAGGAGAAACACTCCCAGAGGAAGTA 1920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1862 GACACTTTAATGAGCATTGCTAAGCATTACGAAACAGGAGAAACACTCCCAGAGGAAGTA 1921
Query 1921 TACAAGAAACTCCTGGCCGCAAGAACATTCCGCGCAGGGTCCTTTAGTCTTCGTCAGTTG 1980
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1922 TACAAGAAACTCCTGGCCGCAAGAACATTCCGTGCAGGGTCCTTTAGTCTTCGTCAGTTG 1981
Query 1981 AAATTTGCCAGTGTTGATCTTGAGCTGCACACAAAATATGTACCAGGAGGACCAGAGTCC 2040
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1982 AAATTTGCCAGTGTTGATCTTGAGCTGCACACAAAATACGTACCAGGAGGACCAGAGTCC 2041
Query 2041 ATCTATGACGTAGATCAAAGGGTATCAGTGAAAACCCAAGTTATCCCTCCACTTCCTGAG 2100
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2042 ATCTATGACGTAGATCAAAGGGTATCAGTAAAAACCCAAGTTATCCCTCCACTTCCTGAG 2101
Query 2101 GATAGATTCCTCTGTAGCTTCAGTCACATCTTTGCCGGGGGATATGCAGCTGGATATTAC 2160
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2102 GATAGATTTCTCTGTAGCTTCAGTCACATCTTTGCCGGGGGATATGCAGCTGGATATTAC 2161
Query 2161 AGTTACAAGTGGGCAGAAGTTTTGTCTGCAGATGCATTTTCAGCATTTGAAGACGCTGGA 2220
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2162 AGTTACAAGTGGGCAGAAGTTTTGTCTGCTGATGCATTTTCAGCATTTGAAGACGCTGGA 2221
Query 2221 CTAGATGACATCAAGGCTGTGAAAGAAACAGGACAGAGATTCAGAGACACCATACTTGCA 2280
||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 2222 CTAGACGACATCAAGGCTGTTAAAGAAACAGGACAGAGATTCAGAAACACCATACTTGCA 2281
Query 2281 CTTGGAGGAGG-AAGAGCGCCTCTTAAGGTGTTTGTTGAGTTTAGAGGACGAGAACCTTC 2339
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2282 CTTGGAGGAGGGAA-AGCGCCTCTTAAGGTGTTTGTTGAGTTTAGAGGACGAGAACCTTC 2340
Query 2340 ACCAGAGCCTCTTCTCAGACACAATGGACTCTTGGCTGCCTCTGCTTCTGCTTAACTCTT 2399
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2341 ACCCGAGCCTCTTCTCAGACACAATGGACTCTTGGCTGCCTCTGCTTCTGCTTAACTCTT 2400
Query 2400 ATAT 2403
||||
Sbjct 2401 ATAT 2404
> AT5G10540.1 | Symbols: | Zincin-like metalloproteases family
protein | chr5:3328065-3334971 FORWARD LENGTH=2852
Length=2852
Score = 2490 bits (1348), Expect = 0.0
Identities = 1860/2107 (88%), Gaps = 36/2107 (2%)
Strand=Plus/Plus
Query 298 ACTCTTTCCTCGAATCCTCTCTTGCAGGACTTCGATTTCCCTCCGTTTGATTCCGTTGAT 357
||||| |||||||||||||| |||||| | || || |||||||||||||| |||||||||
Sbjct 70 ACTCTCTCCTCGAATCCTCTATTGCAGAATTTTGACTTCCCTCCGTTTGACTCCGTTGAT 129
Query 358 GC-CAGTCATGTTC-GTCCTGGGATTCGTGCTCTATTGCAGCATCTCGAAGCTGAATTGG 415
|| || |||| || | ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 130 GCTCA-CCATG-TCAGACCTGGGATTCGTGCTCTGTTGCAGCAGCTCGAAGCTGAATTGG 187
Query 416 AGGAGCTAGAGAAATCTGTGGAGCCATCGTGGCCAAATCTGGTTGAACCATTAGAGAAAA 475
|| ||||||| ||| |||| ||||| || |||||||| || || || ||||||||||| |
Sbjct 188 AGCAGCTAGAAAAAGCTGTAGAGCCTTCATGGCCAAAACTAGTGGAGCCATTAGAGAAGA 247
Query 476 TCGTTGATCGGTTAACTGTTGTTTGGGGAATGATCAATCACCTTAAAGCTGTTAAGGACA 535
| ||||||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 248 TTATTGATCGGTTATCTGTTGTTTGGGGAATGATCAATCATCTTAAGGCTGTCAAGGACA 307
Query 536 CACCTGAGCTTCGTGCTGCCATTGAAGACGTTCAGCCAGAGAAGGTGAAGTTCCAGCTCA 595
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 308 CACCTGAGCTTCGTGCTGCCATTGAAGAAGTTCAGCCGGAGAAGGTGAAGTTCCAGCTCA 367
Query 596 GATTGGGACAAAGCAAGCCTATTTACAATGCCTTTAAAGCTATTCGTGAATCTCCTGATT 655
| |||||||| ||||| || ||||||||||| ||||| |||||||| |||||||| || |
Sbjct 368 GGTTGGGACAGAGCAAACCCATTTACAATGCATTTAAGGCTATTCGAGAATCTCCAGACT 427
Query 656 GGTCA-TC-TCTCAGTGAAGCTCGTCAACGCTTAGTAGAAGCTCAAATTAAGGAGGCGGT 713
|| | || | | || |||||||||||||| ||||| ||||| ||||| |||||||||||
Sbjct 428 GG-AATTCAT-TGAGCGAAGCTCGTCAACGATTAGTTGAAGCCCAAATAAAGGAGGCGGT 485
Query 714 TCTCA-TAGGTATTGCTCTTGATGATGAAAAGAGAGAAGAGTTTAACAAAATTGAACAGG 772
||| | | |||||||||||||| ||||| ||||| ||||| |||||||||||||||||||
Sbjct 486 TCTGAGT-GGTATTGCTCTTGAAGATGATAAGAGGGAAGAATTTAACAAAATTGAACAGG 544
Query 773 AACTCGAAAAACTTTCCCATAAGTTTTCTGAGAATGTTTTGGATGCTACAAAGAAATTTG 832
|||| ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 545 AACTTGAAAAACTTTCTCATAAGTTTTCTGAGAATGTTTTGGACGCTACAAAGAAGTTTG 604
Query 833 AAAAGTTGATTACAGACAAGAAAGAGATCGAGGGATTGCCTCCATCTGCTCTCGGGCTAT 892
|||||||||| ||||||||||||||||| ||||| ||||| |||||||| || || | |
Sbjct 605 AAAAGTTGATAACAGACAAGAAAGAGATTGAGGGGTTGCCACCATCTGCACTTGGATTGT 664
Query 893 TCGCACAAGCAGCTGTCTCCAAGGGCCATGAAAATGCAACTGCTGAGAATGGACCATGGA 952
|||||||||||||||| |||||||||||||||| |||||||||||| | ||||||||||
Sbjct 665 TCGCACAAGCAGCTGTTTCCAAGGGCCATGAAACTGCAACTGCTGACACTGGACCATGGC 724
Query 953 TCATTACACTAGATGCTCCTAGTTATCTTCCTGTCATGCAACATGCTAAGAACCGTGCTC 1012
|||||||||| |||||||||||||||||||| || ||||||||||| || ||||| ||||
Sbjct 725 TCATTACACTCGATGCTCCTAGTTATCTTCCCGTTATGCAACATGCCAAAAACCGAGCTC 784
Query 1013 TGCGTGAGGAAGTTTACCGTGCTTACCTATCTCGTGCCTCTTCTGGCGATTTGGATAATA 1072
|||| |||||||| |||||||||||| |||| ||||||||||| || ||||| |||||||
Sbjct 785 TGCGCGAGGAAGTCTACCGTGCTTACTTATCCCGTGCCTCTTCGGGTGATTTAGATAATA 844
Query 1073 CAGCAATTATCGACCAGATCTTGAAGCTTCG-CTTGGAAAAAGCTAAGCTTCTTGGTTAC 1131
|||||||||||||||| |||||||||||||| | ||||||| ||||||||||||||||||
Sbjct 845 CAGCAATTATCGACCAAATCTTGAAGCTTCGAC-TGGAAAAGGCTAAGCTTCTTGGTTAC 903
Query 1132 A-ACAATTACGCTGAGGTAAGCATGGCTATGAAAATGGCTACTGTTGAGAAAGCAGCA-G 1189
| | ||||| ||||||||||||||||| | ||||||||||||||| |||||||||| | |
Sbjct 904 AGA-AATTATGCTGAGGTAAGCATGGCCACGAAAATGGCTACTGTGGAGAAAGCAG-ATG 961
Query 1190 AGCTTTTAGAGAAGCTTTGTAGTGCATCTTGGGATGCGGCTGTTCAAGACATGGAAGACC 1249
|||| |||| |||||| | ||||| || |||||| |||||||||||||||| |||||||
Sbjct 962 AGCTACTAGAAAAGCTTCGCAGTGCTTCATGGGATCCGGCTGTTCAAGACATAGAAGACC 1021
Query 1250 TCAAGAGTTTCGCAAAGGACCAGGGTGCAGCAGAATCTGACAGTTTGACTCACTGGGACA 1309
| |||||||| || ||| |||| ||||| ||||| ||||||||||||||||||||||||
Sbjct 1022 TTAAGAGTTTTGCGAAGAACCAAGGTGCTGCAGAGGCTGACAGTTTGACTCACTGGGACA 1081
Query 1310 CCACTTTCTGGAGTGAGAGGCTTCGTGAATCCAAATATGATATTAATGAGGAAGAACTAC 1369
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 1082 TCACTTTCTGGAGTGAGAGGCTTCGTGAATCCAAATACGATATTAATGAGGAAGAACTGC 1141
Query 1370 GTCCATACTTCTCACTACCAAAGGTTATGGATGGAC-TT-TTCAGTCTAGCTAAGACACT 1427
| || ||||||||| | ||||||||||||||| | | || ||| ||||||||||||||||
Sbjct 1142 GACCTTACTTCTCATTGCCAAAGGTTATGGAT-G-CGTTATTCGGTCTAGCTAAGACACT 1199
Query 1428 ATTTGGAATTGATATTGAACCAGCAGATGGTTTAGCTCCGGTCTGGAACAACGATGTTCG 1487
||||||||||||| ||| |||||||| ||| |||| ||||||||||||| ||||||| |
Sbjct 1200 ATTTGGAATTGATGTTGTGCCAGCAGACGGTGTAGCGCCGGTCTGGAACAGCGATGTTAG 1259
Query 1488 GTTCTACCGCGTCAAAGATTCTTCTGGGAACCCAATC-GCTTACTTT-TACTTTGATCCA 1545
||||||| | ||||||||||||||||| || |||| | ||||| ||| |||||||||||
Sbjct 1260 GTTCTACTGTGTCAAAGATTCTTCTGGAAATCCAA-CTGCTTA-TTTCTACTTTGATCCC 1317
Query 1546 TACTCTCGCCCTTCAGAGAAA-AGAGGTGGCGCTTGGATGGATGAGGTTGTTTCCCGTAG 1604
||||||||||||||||| ||| |||| ||||||||||||||||| ||| |||| |||||
Sbjct 1318 TACTCTCGCCCTTCAGA-AAAGAGAGACGGCGCTTGGATGGATGAAGTTTTTTCTCGTAG 1376
Query 1605 CCGAGTCATGGCTCAGAAAGGCTCTTCTGTTAGGCTTCCTGTTGCACACATGGTCTGCAA 1664
|||||||||||| ||||| || || || ||||| || |||||||| || |||||||||||
Sbjct 1377 CCGAGTCATGGCCCAGAAGGGTTCCTCCGTTAGACTCCCTGTTGCTCAAATGGTCTGCAA 1436
Query 1665 CCAAACTCCACCAGTAGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACAGT 1724
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1437 CCAAACTCCACCTGTTGGTGACAAGCCAAGCCTTATGACATTCCGTGAGGTAGAGACTGT 1496
Query 1725 ATTTCATGAATTTGGACATGCTCTTCAGCACATGCTTACGAA-GCAGGATGAAGGGCTAG 1783
|| ||||||||||| |||||||||||||| |||||||| || | ||||||| |||||||
Sbjct 1497 GTTCCATGAATTTGGCCATGCTCTTCAGCATATGCTTACCAAAG-AGGATGAGGGGCTAG 1555
Query 1784 TGGCTGGTATCCGAAATATCGAGTGGGACGCAGTTGAATTACCATCACAGTTTATGGAGA 1843
||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 1556 TGGCTGGTATCCGGAATATCGAGTGGGATGCAGTTGAATTACCGTCACAGTTTATGGAGA 1615
Query 1844 ATTGGTGCTACCACAGGGACACTTTAATGAGCATTGCTAAGCATTA-CGAAACAGGAGAA 1902
| ||||||||||||||||| || ||||||||||||||||||||||| | |||||||||||
Sbjct 1616 ACTGGTGCTACCACAGGGATACCTTAATGAGCATTGCTAAGCATTATC-AAACAGGAGAA 1674
Query 1903 ACACT-CCCAGAGGAA-GTATACAAGAAACTCCTGGCCGCAAGAACATTCCGCGCAGGGT 1960
|| || ||| ||| || ||||||||||| || ||||| |||||||||||||| |||||||
Sbjct 1675 ACTCTTCCC-GAG-AATGTATACAAGAAGCTACTGGCTGCAAGAACATTCCGTGCAGGGT 1732
Query 1961 CCTTTAGTCTTCGTCAGTTGAAATTTGCCAGTGTTGATCTTGAGCTGCACACAAAATATG 2020
|| |||||||||| |||||||| ||||| | |||||||| |||||||||||||||||
Sbjct 1733 CCCTTAGTCTTCGCCAGTTGAAGTTTGCTACAGTTGATCTGGAGCTGCACACAAAATACA 1792
Query 2021 TACCAGGAGGACCAGAGTCCATCTATGACGTAGATCAAAGGGTATC-AGTGAAAACCCAA 2079
| ||||| || ||||| ||||||| || || ||||||||||| || | | ||||| |||
Sbjct 1793 TGCCAGGTGGGGCAGAGACCATCTACGAAGTTGATCAAAGGGTGTCCA-TAAAAACACAA 1851
Query 2080 GTTATCCCTCCACTTCCTGAGGATAGATTCCTCTGTAGCTTCAGTCACATCTTTGCCGGG 2139
|| ||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||
Sbjct 1852 GTGATCCCTCCACTTCCTGAAGATAGATTCCTCTGTAGCTTCAGTCATATATTTGCAGGT 1911
Query 2140 GGATATGCAGCTGGATATTACAGTTACAAGTGGGCAGAAGTTTTGTCTGCAGATGCATTT 2199
|| |||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||
Sbjct 1912 GGTTATGCAGCTGGATACTACAGTTACAAGTGGGCGGAGGTTTTGTCTGCAGATGCGTTT 1971
Query 2200 TCAGCATTTGAAGACGCTGGACTAGATGACATCAAGGCTGTGAAAGAAACAGGACAGAGA 2259
||||| |||||||| ||||| | |||||||| |||||||| ||||||||||||||||||
Sbjct 1972 TCAGCTTTTGAAGATGCTGGGTTGGATGACATTAAGGCTGTCAAAGAAACAGGACAGAGA 2031
Query 2260 TTCAGAGACACCATACTTGCACTTGGAGGAGGAAGAGCGCCTCTTAAGGTGTTTGTTGAG 2319
|||||| |||| |||||||| || |||||||||| ||| ||||| || |||||||| |||
Sbjct 2032 TTCAGAAACACTATACTTGCTCTGGGAGGAGGAAAAGCTCCTCTAAAAGTGTTTGTGGAG 2091
Query 2320 TTTAGAGGACGAGAACCTTCACCAGAGCCTCTTCTCAGACACAATGGACTCTTGGCTGCC 2379
|| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 2092 TTCAGAGGACGAGAACCTTCCCCAGAGCCTCTGCTCAGACACAATGGACTCTTGGCTGCT 2151
Query 2380 TCTGCTT 2386
|||||||
Sbjct 2152 TCTGCTT 2158
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119929102005
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5