BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg951491 Length=959 Score E Sequences producing significant alignments: (Bits) Value AT5G67300.1 | Symbols: ATMYBR1, ATMYB44, MYBR1, MYB44 | myb dom... 1491 0.0 > AT5G67300.1 | Symbols: ATMYBR1, ATMYB44, MYBR1, MYB44 | myb domain protein r1 | chr5:26854022-26856006 FORWARD LENGTH=1985 Length=1985 Score = 1491 bits (807), Expect = 0.0 Identities = 900/946 (95%), Gaps = 2/946 (0%) Strand=Plus/Plus Query 15 AAAATCAATGGCTGATAGGATTAAAGGTCCATGGAGTCCTGAAGAAGACGAGCAGCTTCG 74 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 81 AAAATCAATGGCTGATAGGATCAAAGGTCCATGGAGTCCTGAAGAAGACGAGCAGCTTCG 140 Query 75 TAGGCTTGTTGTTAAATACGGTCCGAGAAACTGGACTGTGATTAGCAAATCTATTCCCGG 134 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 141 TAGGCTTGTTGTTAAATACGGTCCAAGAAACTGGACAGTGATTAGCAAATCTATTCCCGG 200 Query 135 TAGATCGGGAAAATCGTGTCGTTTACGGTGGTGCAACCAGCTTTCGCCGCAAGTTGAGCA 194 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 201 TAGATCGGGGAAATCGTGTCGTTTACGGTGGTGCAACCAGCTTTCGCCGCAAGTTGAGCA 260 Query 195 CCGGCCGTTTTCGGCGGAGGAAGACGAGACGATCGCGCGTGCTCACGCTCAGTTTGGTAA 254 |||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 261 TCGGCCGTTTTCGGCTGAGGAAGACGAGACGATCGCACGTGCTCACGCTCAGTTCGGTAA 320 Query 255 TAAATGGGCGACGATTGCTCGTCTTCTCAACGGTCGTACGGACAACGCCGTGAAGAATCA 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 321 TAAATGGGCGACGATTGCTCGTCTTCTCAACGGTCGTACGGACAACGCCGTGAAGAATCA 380 Query 315 CTGGAACTCGACGCTCAAGAGGAAATGCGGTGGTTACGACCATCGGGGTTTCGATGGTTC 374 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 381 CTGGAACTCGACGCTCAAGAGGAAATGCGGCGGTTACGACCATCGGGGTTACGATGGTTC 440 Query 375 GGAGGATCATCGGCCGGTTAAGAGATCGGTGAGTGCTGGATCTCCTCCTGTTGTTACTGG 434 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 441 GGAGGATCATCGGCCGGTTAAGAGATCGGTGAGTGCGGGATCTCCACCTGTTGTTACTGG 500 Query 435 GCTTTATATGAGCCCAGGAAGCCCAACTGGATCTGACGTCAGTGATTCAAGTACAATTCC 494 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct 501 GCTTTACATGAGCCCAGGAAGCCCAACTGGATCTGATGTCAGTGATTCAAGTACTATCCC 560 Query 495 GATATTACCCTCTGTTGAGCTTTTCAAGCCGGTGCCTAGACCTGGTGCTGTTGTGTTACC 554 ||||||||| || ||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 561 GATATTACCTTCCGTTGAGCTTTTCAAGCCTGTGCCTAGACCTGGTGCTGTTGTGCTACC 620 Query 555 GCTTCCCATTGAAACGTCGTCGTCTTCTGCTGATCCACCGACTTCGTTAAGTTTGTCACT 614 |||||| || ||||||||||| ||||| | ||||||||||||||||||||| |||||||| Sbjct 621 GCTTCCTATCGAAACGTCGTCTTCTTCCGATGATCCACCGACTTCGTTAAGCTTGTCACT 680 Query 615 TCCTGGTGCTGACGTAAGCGAGGAGTCAAACCGTAGCCATGAGTCAACGAATATCAATAA 674 ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 681 TCCTGGTGCCGACGTAAGCGAGGAGTCAAACCGTAGCCACGAGTCAACGAATATCAACAA 740 Query 675 CACCACTTCGAGCCGCCACAACAACAACAACACGGTGTCGTTTTTGCCTTTTAGTGGGGG 734 |||||||||||||||||||||| ||||||| |||||||||||| |||| |||||||| || Sbjct 741 CACCACTTCGAGCCGCCACAACCACAACAATACGGTGTCGTTTATGCCGTTTAGTGGTGG 800 Query 735 GTTTAGAGGTGCGATTGAGGATATGGGGAAGTCTTTTCCCGGTAACGGCGGCGAGTTTAT 794 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 801 GTTTAGAGGTGCGATTGAGGAAATGGGGAAGTCTTTTCCCGGTAACGGAGGCGAGTTTAT 860 Query 795 GGCGGTGGTGCAAGAGATGATTAAGGCGGAAGTGAGAAGTTACATGACGGAGATGCAGA- 853 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 861 GGCGGTGGTGCAAGAGATGATTAAGGCGGAAGTGAGGAGTTACATGACGGAGATGCA-AC 919 Query 854 GAAACAATGGTGGTGGATTCGTCGGAGGATTCAAGGATAATGGCATGATTCCGATGAGTC 913 | ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 920 GGAACAATGGTGGCGGATTCGTCGGAGGATTCATTGATAATGGCATGATTCCGATGAGTC 979 Query 914 AAATTGGAGTTGGGAGAATCGAGTAGAGAGAGTGAGATTTTTAGGA 959 ||||||||||||||||||||||||||| | ||||||||| |||||| Sbjct 980 AAATTGGAGTTGGGAGAATCGAGTAGACAAAGTGAGATTATTAGGA 1025 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46918693298 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5