BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg951784 Length=1294 Score E Sequences producing significant alignments: (Bits) Value AT2G31150.1 | Symbols: | ATP binding;ATPases, coupled to trans... 1061 0.0 > AT2G31150.1 | Symbols: | ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism | chr2:13272375-13274578 FORWARD LENGTH=2049 Length=2049 Score = 1061 bits (574), Expect = 0.0 Identities = 783/875 (89%), Gaps = 49/875 (6%) Strand=Plus/Plus Query 429 GAGAAAGAGATAGTGGAGCTTTTCAGGAAAGTCCAAGCTCAGCTCCGGGCTCGAGCTGCT 488 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 1151 GAGAAAGAGATAGTGGAGCTTTTCAAGAAAGTCCAAGTTCAGCTCCGGGCTCGAGCTGCT 1210 Query 489 GCTaagaaagaagaaaagaagactgaagaagcttctaaaggacaaggg-ggaaaagaTAG 547 ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| || Sbjct 1211 GCTAAGAAAGAAGAAAAGAAGACTGAAGAAGCTTCTAAAGGAC-AGGGAGGAAAAGAGAG 1269 Query 548 CGAGACAGTGGACTCCCTTCTTAAGTTACTGAGGAAGCACTCAGGAGAACAAAGCAAGAA 607 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1270 TGAGACAGTGGACTCCCTTCTTAAGTTACTGAGGAAGCACTCAGGAGAACAAAGCAAGAA 1329 Query 608 ACAAGTTAGCAATTTTAATTCTGAAAAGCAGCTACAAAGAGATGATGATGCTTCAGAAAG 667 ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| Sbjct 1330 ACAAGTTAGCAATTTCAATTCTGAGAAGCAGCTCCAAAGAGATGATGATGCTTCAGAAAG 1389 Query 668 ACAAGATCACAGTTCCAATCGTTTTGATTCGCAAAACAAAGATCATAATGCAACACCCTT 727 |||| |||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| Sbjct 1390 ACAAAATCACAGTTCCAGTCGTTTCGATTCGCGAAACAAAGATCATAATGCAACACCCTT 1449 Query 728 TACCAGGCCAGCATCAAGCTTCAGACGCAATTCGCCTGTACCAAGACATAAATCCCAAGC 787 ||||||||||||||||||||||| ||| ||||| |||||||| ||||||||||| ||||| Sbjct 1450 TACCAGGCCAGCATCAAGCTTCAAACGTAATTCTCCTGTACCGAGACATAAATCTCAAGC 1509 Query 788 CAGTTATTCTAGTGAGGCCATTTTTGATCAAGCTTCAAGTTACAGTGTGACTTGGACCCA 847 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1510 CAGTTATTCTAGTGAGGCCATTTTTGATGAAGCTTCAAGTTACAGTGTGACTTGGACCCA 1569 Query 848 GAAAAAGGATCAAGTAGAGTCGCGTGATGAACCTGAATACGAGCCTGAGCCTGAGTCTGC 907 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1570 GAAAAAGGATCAAGTAGAGTCGCGTGATGAACCTGAATACGAGCCTGAGCCTGAGTCTGC 1629 Query 908 AGCTGAGTATGATGAACCTGAGCCTGAGTCTGCAGCTGAGTATGATGAACCTGAACCTGA 967 ||||||||||||||||||||| |||||| || ||||||||| | |||||| |||| Sbjct 1630 AGCTGAGTATGATGAACCTGAACCTGAG---GC---TGAGTATGA--A-CCTGAATCTGA 1680 Query 968 GGCTGAGTATGAATCTGAATCTGAACCAGGACTTGCTATTCTAGATTCAGTGTCAGAGCT 1027 | || | | | || || | || || | | || ||||||||||||| Sbjct 1681 ACC--AG-A--ACT-TG---CT-A--------TT-CT---CGA-AT-CAGTGTCAGAGCT 1716 Query 1028 AAAACCAGAATCGTTTTACCAAGAGGAGGATGAAGATGAAGAGGAGGATCATGACGCCGT 1087 |||| ||| ||||||||||||||||| ||||||||||| | | |||||||| || ||| Sbjct 1717 GAAACTAGAGTCGTTTTACCAAGAGGAAGATGAAGATGA-G-G-AGGATCATAACTTCGT 1773 Query 1088 TGTAGATGAGTTATCAGATGATGACGAGTCTCTCGATA-----T-C-GAGGAAGAAACTG 1140 | |||||||||||||||||||||||||||||||| ||| | | |||||||| |||| Sbjct 1774 TATAGATGAGTTATCAGATGATGACGAGTCTCTCAATACCGACTACCGAGGAAGAGACTG 1833 Query 1141 CGAAAGACGAAGATTTGAGTGCACTGAAGTTTGTAGAACTTAGAGCCATAGCAAAAACAA 1200 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 1834 CGAAAGACGAAGATTTGAGTGCACTGAAGTTGGTAGAACTTAGAGCCATAGCAAAATCAA 1893 Query 1201 GAGGACTTAAAGTGA-TTTCAAAGATAAAGAAAGCTGATCTACTGAATTTATTGGGTAGT 1259 ||||||| |||| || |||||||||| ||||||| ||| ||| ||| ||||||||||||| Sbjct 1894 GAGGACTCAAAG-GAATTTCAAAGATGAAGAAAGTTGAGCTAGTGACTTTATTGGGTAGT 1952 Query 1260 AATAATAAATCATGATGATCAGATTT--AACATGA 1292 | ||||||| |||||||||||||||| ||||||| Sbjct 1953 AGTAATAAAGCATGATGATCAGATTTTTAACATGA 1987 Score = 228 bits (123), Expect = 1e-58 Identities = 129/132 (98%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 235 GCCATAGGAGAAATAATCCTGATTTCTCAAGAAACAATAAGCATGGTTTCCGAGGCAGAA 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1020 GCCATAGGAGAAATAATCCTGATTTCTCAAGAAACAATAAGCATGGTTTCCGAGGCAGAA 1079 Query 295 ACAGGCGAAACGAAGATAGGGATGGTTTAGTAGATGGTGGTCTCGAAGACGACATTTTGT 354 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| Sbjct 1080 ACAGGCGAAACGAAGATAAGGATGGTTTAGTAGATGGTGGTCTTGAAGACGACATGTTGT 1139 Query 355 CTTCCAAAAACG 366 |||||||||||| Sbjct 1140 CTTCCAAAAACG 1151 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 63654291060 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5