BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg951876 Length=895 Score E Sequences producing significant alignments: (Bits) Value AT1G69890.1 | Symbols: | Protein of unknown function (DUF569) ... 1238 0.0 AT1G27100.1 | Symbols: | Actin cross-linking protein | chr1:94... 215 7e-55 > AT1G69890.1 | Symbols: | Protein of unknown function (DUF569) | chr1:26323111-26324616 REVERSE LENGTH=1244 Length=1244 Score = 1238 bits (670), Expect = 0.0 Identities = 815/883 (92%), Gaps = 18/883 (2%) Strand=Plus/Plus Query 12 TATTAGCAA-ATGGAGTTTTTCAATCAAGCTAAAGCCGTAAGGATGCGTAACGTCCATGA 70 |||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 81 TATTAG-AAGATGGATTTTTTCAATCAAGCTAAAGCCGTAAGGATGCGTAACGTCCATGA 139 Query 71 AAAGTATCTAACGGCGGACGAAGACGAGGAAACGGTGACACAAGACAGGAATGGTTCCGA 130 ||||||||||| ||||| || ||||||||||||||||| |||||||||||||||||||| Sbjct 140 TAAGTATCTAACAGCGGATGAGGACGAGGAAACGGTGACTCAAGACAGGAATGGTTCCGA 199 Query 131 CAAGAGAGCTAGATGGACCGTCGAGCCGGTTCGAGGTTCCTTTGAAGTAATCCGTTTGAG 190 ||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| || Sbjct 200 CAAGAGAGCTAGATGGATTGTCGAGCCGGTTCGTGGTTCCTTTGAAGTGATCCGTTTAAG 259 Query 191 GAGCTGCTACGGTAATTACCTCACTGCCTCAAACGAACGGTTCTTGCTCGGTGCCACTGG 250 ||||||||||||||| |||||||| || || || || |||||||||||||| |||||||| Sbjct 260 GAGCTGCTACGGTAACTACCTCACCGCTTCGAATGAGCGGTTCTTGCTCGGAGCCACTGG 319 Query 251 ACGTAAAGTGGTCTTGTCAAAACCGGCTCGACTCGACTCGTCCGTCGAGTGGGAACCGGC 310 |||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| Sbjct 320 ACGTAAAGTGGTCTTGTCTAAACCGGCTCGACTCGACTCCTCCGTAGAGTGGGAACCGGT 379 Query 311 GAGAGAATGTTCCAAAATGAAGCTTAAGACGAGATACGGCAACTTGCTTCGAGCCAACGG 370 ||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct 380 GAGAGAAGGTTCCAAAATGAAGCTCAAGACTAGATACGGAAACTTGCTTCGAGCCAACGG 439 Query 371 TGGACTTCCTCCGTGGCGTAACTCTGTCACGCATGACACTCCTCATGTATCGGACTCCTT 430 |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| || || Sbjct 440 TGGACTTCCTCCATGGCGTAACTCTGTCACGCATGACACTTCTCATGTATTGGATTCTTT 499 Query 431 CTTGTGGGATGTTGATGTGGTTGAGATTTTGGTGGGCACGGCCACTCCAGCTCCAGATCC 490 |||||||||||||||||||||||||||||||||||| ||| || | |||| | Sbjct 500 CTTGTGGGATGTTGATGTGGTTGAGATTTTGGTGGGAACG---ACG--A-CTCC-G---- 548 Query 491 AGCTCCAGCTCCAGCTCCGGTGACAACTCCGCCGCCACATAGGAGACCGTCGTACTCGTA 550 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| Sbjct 549 -GCTCCAGCTCCAGCTCCGGTGACAACTCCTCCGCCACATAGGAGGCCGTCGTACACGTA 607 Query 551 TTCTCCGGTTTCTAGAACATCTTCAGAAAAATCCGAAGAAGAGTTGACCGTGCCGCCGCC 610 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 608 TTCTCCGGTTTCTAGAACATCTTCAGAAAAATCCGAAGAAGAGTTGACCGTGCCGCCACC 667 Query 611 AAAATCTGAAGGGAGGACTATTTACTACCACATCGCGGACGAAGAAGGACACGTGGAGGA 670 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 668 GAAATCTGAAGGGAGGCCTATTTACTACCACATCGCGGACGAAGAAGGACACGTGGAGGA 727 Query 671 AGAATCAGCCGTTGGATACGCTTTGACTTTTAATGGAAACAGCGTGGAACAGTTGACGCA 730 |||||||||||||||||| || |||||||| || ||||| |||||||||||||||||||| Sbjct 728 AGAATCAGCCGTTGGATATGCGTTGACTTTCAAAGGAAATAGCGTGGAACAGTTGACGCA 787 Query 731 GGCGTTGCAAGAAGAGACTAGCATGGATGATGTTGTGGTGTGTACACGCAATCCTTTAAA 790 ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| ||| Sbjct 788 GGCGTTGCAAGAAGAGACTAGTATGGATGATGTTGTGGTCTGTACACGCCATCCTTCAAA 847 Query 791 CGGCAAGCTGTTTCCTCTTCGTTTGCAACTTCCACCAAATAGTGGAACAATGCATGTCGT 850 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 848 CGGCAAGCTGTTTCCTCTTCGTTTGCAACTTCCACCTAATAGTGGAACAATGCATGTCAT 907 Query 851 TCTAGTACCCTCAAGTACTTCTTAAACGGCAAGCTGTGTGGTT 893 |||||||||||||||||||| || ||||||||||||||||| Sbjct 908 TCTAGTACCCTCAAGTACTT---AA-CGGCAAGCTGTGTGGTT 946 > AT1G27100.1 | Symbols: | Actin cross-linking protein | chr1:9407125-9411172 REVERSE LENGTH=2090 Length=2090 Score = 215 bits (116), Expect = 7e-55 Identities = 212/259 (82%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 606 CCGCCAAAATCTGAAGGGA-GGACTATTTACTACCACATCGCGGACGAAGAAGGACACGT 664 ||||| ||||||| | ||| | || || || ||||| |||| ||||| ||||||||||| Sbjct 1386 CCGCCTAAATCTG-ATGGACGAACCATATATTACCATGTCGCTGACGAGGAAGGACACGT 1444 Query 665 GGAGGAAGAATCAGCCGTTGGATACGCTTTGACTTTTAATGGAAACAGCGTGGAACAGTT 724 ||| || ||| || |||||||||| ||||| || ||||| ||||| ||||||| || | Sbjct 1445 GGAAGATGAAACAACCGTTGGATATGCTTTCACGTTTAAAGGAAATAGCGTGGCGGAGCT 1504 Query 725 GACGCAGGCGTTGCAAGAAGAGAC-TAGCATGGATGATGTTGTGGTGTGTACACGCAATC 783 ||| ||| | |||| |||||| || | ||||||| || | |||||||||||| || | || Sbjct 1505 GACTCAGACATTGCGAGAAGAAACGT-GCATGGAAGACGCTGTGGTGTGTACTCGTAGTC 1563 Query 784 CTTTAAACGGCAAGCTGTTTCCTCTTCGTTTGCAACTTCCACCAAATAGTGGAACAATGC 843 |||||||||||||||||||||||||||||||||||||||| || || | |||||| ||| Sbjct 1564 CTTTAAACGGCAAGCTGTTTCCTCTTCGTTTGCAACTTCCTCCTAACAACGGAACATTGC 1623 Query 844 ATGTCGTTCTAGTACCCTC 862 ||||| || || ||||||| Sbjct 1624 ATGTCATTTTACTACCCTC 1642 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43703707890 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5