BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952435 Length=349 Score E Sequences producing significant alignments: (Bits) Value AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 | chr... 411 3e-114 > AT5G60100.2 | Symbols: PRR3 | pseudo-response regulator 3 | chr5:24197998-24201364 REVERSE LENGTH=2182 Length=2182 Score = 411 bits (222), Expect = 3e-114 Identities = 263/282 (93%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 13 TTCTAAAAATGTGTTTTAATAACAACGAAACTGGTGATGAAGTGAAAACCGAGAGGCAAG 72 |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 389 TTCTAAAAATGTGTTTTAATAACATTGAAACTGGTGATGAAGTGGAAACCGAGAGGCAAG 448 Query 73 TGTTTGTTTCATCCGAAGAAGATGAATTTCGAGTTGAAGATACTCCTGGAGATGATGCCA 132 |||||| |||||| |||||||||||||||||||||||||||||| || ||| || ||| Sbjct 449 TGTTTGGTTCATCTGAAGAAGATGAATTTCGAGTTGAAGATACTGCT--AGA-AATACCA 505 Query 133 ACAATTTGATACAGATTTCTCAACAACAACAGCAACCGCTAGCTCCTGTTGTTAAGTGGG 192 |||| || ||||||||||||||||||| |||||||||||||||| |||||| ||||||| Sbjct 506 ACAA--TG-TACAGATTTCTCAACAACAGCAGCAACCGCTAGCTCATGTTGTGAAGTGGG 562 Query 193 AGAGGTATCTCCCGGTTAGATCGCTTAAGGTTCTTCTGGTGGAGAATGATGACTCAACAC 252 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 563 AGAGGTATCTCCCAGTTAGATCGCTTAAGGTTCTTCTGGTGGAGAATGATGACTCAACAC 622 Query 253 GCCATATTGTTACTGCCCTTTTGAAGAATTGCAGCTATGAAG 294 |||||||||||||||||||||| ||||||||||||||||||| Sbjct 623 GCCATATTGTTACTGCCCTTTTAAAGAATTGCAGCTATGAAG 664 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16337018425 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5