BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952599 Length=1347 Score E Sequences producing significant alignments: (Bits) Value AT2G39110.1 | Symbols: | Protein kinase superfamily protein | ... 2069 0.0 AT5G35580.1 | Symbols: | Protein kinase superfamily protein | ... 63.9 4e-09 > AT2G39110.1 | Symbols: | Protein kinase superfamily protein | chr2:16319664-16321685 FORWARD LENGTH=1531 Length=1531 Score = 2069 bits (1120), Expect = 0.0 Identities = 1275/1351 (94%), Gaps = 6/1351 (0%) Strand=Plus/Plus Query 1 TCACAACATTTCAGTCATCCTCATGAATAATTCTACATCAGTGAGGAGGCTGGTTTCGTC 60 ||||| |||| || |||||||||||||||||||||||||||||| |||||||||||| || Sbjct 85 TCACAGCATTCCATTCATCCTCATGAATAATTCTACATCAGTGAAGAGGCTGGTTTCATC 144 Query 61 TAAAGCAATGAAATGTTTCTACTTCAGCAAAGACAAAACTCAGGATGATGAAGCTAAGAC 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 145 TAAGGCAATGAAATGTTTCTACTTCAGCAAAGACAAAACTCAGGATGATGAAGCTAAGAC 204 Query 121 GAGAAAGTTTGGTTCCA-TTACGATGGCTAGAGGAGGATCAGGGTCTGAATTTAACTCTG 179 ||||||||||||| || |||||||||||||||||||||||||||||| ||||| || | Sbjct 205 TAGAAAGTTTGGTT-CAGCTACGATGGCTAGAGGAGGATCAGGGTCTGAGTTTAATTCAG 263 Query 180 ATACAAGTACTGCTACTTCCATTACTTCTTCCTTGCACGTTCTCTCAGAGACACACAGTA 239 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 264 ATACAAGTACTGCTACTTCCATTACTTCTTCCTTGCACGTCCTCTCAGAGACACACAGTA 323 Query 240 ACAATCTCAAAGTCTTTGCCCTCGATGACCTTAAAACTGCTACCAAAAATTTCAGCCGCT 299 | ||||||||||| |||| |||||||||||||||||| |||||||| || |||||||||| Sbjct 324 ATAATCTCAAAGTATTTGTCCTCGATGACCTTAAAACCGCTACCAAGAACTTCAGCCGCT 383 Query 300 CATTGATGATCGGTGAAGGTGGCTTTGGCGGTGTCTTTCGTGGCGTGATTCAGAACCCTC 359 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 384 CCTTGATGATCGGTGAAGGTGGCTTTGGTGGTGTCTTTCGTGGCGTGATTCAGAACCCTC 443 Query 360 AAGATTCTCGTAAGAAGATTGAAATTGCAGTTAAACAACTCAGTAGAAGAGGTCTACAGG 419 ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 444 AAGATTCTCGTAAAAAGATTGATATTGCAGTTAAACAACTTAGTAGAAGAGGTCTACAGG 503 Query 420 GTCATAAAGAATGGGTGACAGAGGTAAATGTACTGGGAGTAGTGGAGCATCCGAATCTGG 479 | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 504 GGCATAAAGAATGGGTGACAGAGGTAAATGTATTGGGAGTAGTGGAGCATCCGAATCTGG 563 Query 480 TGAAGCTGATCGGTTATTGCGCTGAGGATGATGAGAGAGGGATCCAAAGGCTACTTGTTT 539 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 564 TGAAGCTGATCGGTTATTGCGCTGAGGATGATGAGAGAGGGATCCAACGGCTACTTGTTT 623 Query 540 ACGAATACGTACCAAACAGAAGTGTTCAAGACCATTTATCCAATCGTTTTATTGTCACTC 599 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 624 ACGAATACGTACAAAACAGAAGTGTTCAAGACCATTTATCCAATCGTTTTATAGTCACTC 683 Query 600 CTCTCCCTTGGTCCACCAGATTAAAGATTGCTCAGGACACTGCTCGAGGACTTGCTTATC 659 |||| ||||||||||||||| | ||||||||||| ||||||||| ||||||| ||||||| Sbjct 684 CTCTTCCTTGGTCCACCAGACTGAAGATTGCTCAAGACACTGCTAGAGGACTCGCTTATC 743 Query 660 TTCATGAAGGCATGGAGTTTCAGATCATCTTTAGGGATTTCAAATCCTCCAATATTCTTC 719 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 744 TTCATCAAGGCATGGAGTTTCAGATCATCTTTAGGGATTTCAAATCCTCTAATATCCTTC 803 Query 720 TTGATGAGAATTGGAATGCAAAGCTCTCGGATTTCGGACTGGCTCGAATGGGTCCTTCTG 779 |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct 804 TTGATGAGAACTGGAATGCAAAACTCTCGGATTTCGGACTGGCTCGAATGGGTCCTTCAG 863 Query 780 ATGGAATCACTCATGTCTCCACTGCGGTTGTAGGGACCATTGGTTATGCAGCACCGGAAT 839 ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 864 ATGGAATCACTCACGTTTCCACCGCGGTTGTAGGGACCATTGGTTATGCAGCACCGGAAT 923 Query 840 ATATCCAAACAGGACACCTCACTGCCAAGAGTGACGTGTGGAGCTACGGAATCTTTCTAT 899 | |||||||||||||||||||| || ||||| |||||||||||||||||||||||| ||| Sbjct 924 ACATCCAAACAGGACACCTCACGGCTAAGAGCGACGTGTGGAGCTACGGAATCTTTTTAT 983 Query 900 ATGAACTCATCACAGGAAGACGACCTTTTGACCGTAACCGCCCAAGAAACGAGCAGAATA 959 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 984 ATGAACTCATCACAGGAAGACGACCTTTTGACCGTAACCGCCCAAGAAACGAGCAGAACA 1043 Query 960 TCCTGGAGTGGATCAGACCACACTTGTCCGACATAAAGAAGTTCAAGATGATCATCGACC 1019 || |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 1044 TCTTGGAGTGGATCAGACCACACTTATCCGACATAAAGAAGTTCAAAATGATCATCGACC 1103 Query 1020 CAAGACTTGAAGGAAACTACTACCTCAAATCAGCATTGAAGCTAGCTGCAGTTGCTAACC 1079 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 1104 CAAGACTTGAAGGAAACTACTACCTCAAGTCAGCATTAAAGCTAGCTGCAGTTGCTAACC 1163 Query 1080 GGTGTTTGATGGTGAAGGCGAAGGCTAGGCCAACAATGAGTCAGGTTTCAGAGATGTTAG 1139 ||||||||||||| || ||||| || |||||||||||||||||||||||||||||||||| Sbjct 1164 GGTGTTTGATGGTAAAAGCGAAAGCAAGGCCAACAATGAGTCAGGTTTCAGAGATGTTAG 1223 Query 1140 AAAGGATAGTGGAAACATCA---GATGATGCTCCTTCAGGACTGCCATTGATGAAGAGCT 1196 |||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||| Sbjct 1224 AAAGGATAGTGGAAACATCATCAGATGGTGCTCCTTCAGGACTGCCATTGATGAAAAGCT 1283 Query 1197 TGACACCTAAAGCTGCATTCGAGGCCTCAAGAAGAGAGAGAGTTAAAAGAAGATTTGTTG 1256 |||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct 1284 TGACACCTAAAGATGCATTCGAAGCCTCAAGAAGGGAGAGAGTTAAGAGAAGATTTGTTG 1343 Query 1257 AACTTTTGATCGGAGAAAATGGTTGTCCCAATTTACCCACTTGGTCTCCTAAACTTGTTA 1316 |||| || || |||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 1344 AACTGTTAATTGGAGAAAATGGTTGTCCCAATTTACCTACTTGGTCTCATAAACTTGTTA 1403 Query 1317 CTTCTACTTGATTTTTT-GAGAGAACAAACT 1346 |||||| |||||||||| ||||||||||||| Sbjct 1404 CTTCTATTTGATTTTTTTGAGAGAACAAACT 1434 > AT5G35580.1 | Symbols: | Protein kinase superfamily protein | chr5:13761965-13763944 FORWARD LENGTH=1593 Length=1593 Score = 63.9 bits (34), Expect = 4e-09 Identities = 41/44 (93%), Gaps = 2/44 (5%) Strand=Plus/Plus Query 465 AGCATCCGAATCTGGTGAAGCTGATCGGTTATTGC-GCTGAGGA 507 |||||||||||||||||||||||||||| |||||| || ||||| Sbjct 419 AGCATCCGAATCTGGTGAAGCTGATCGGATATTGCTGC-GAGGA 461 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66314919945 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5