BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg952639

Length=244
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G55050.1 | Symbols:  | GDSL-like Lipase/Acylhydrolase superf...   305    1e-82


> AT5G55050.1 | Symbols:  | GDSL-like Lipase/Acylhydrolase superfamily 
protein | chr5:22337701-22340100 FORWARD LENGTH=1534
Length=1534

 Score =  305 bits (165),  Expect = 1e-82
 Identities = 185/195 (95%), Gaps = 0/195 (0%)
 Strand=Plus/Plus

Query  50    ACCTTCCTTGTCTTCCTTTGGCAAAGTTATGTTCAGACAGAACCAAATATCTTTTCTGGG  109
             ||||||||||||| |||||||| |||||||||||||||||||||||| ||||||| ||||
Sbjct  1003  ACCTTCCTTGTCTGCCTTTGGCGAAGTTATGTTCAGACAGAACCAAACATCTTTTTTGGG  1062

Query  110   ATCGCTACGGTCATCCCACAGAAGCTGCTGCTCGGACCATCGTCGATCTTATGTTGACTG  169
             ||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct  1063  ATCGCTATGGCCATCCCACTGAAGCTGCTGCTCGGACCATCGTCGATCTTATGTTGACTG  1122

Query  170   ATGATTCACACTACTCATCTCCTATAACCCTTACTCAGTTGGTCTCTACATGATCAATAA  229
             ||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct  1123  ATGATACACATTACTCATCTCCTATAACTCTTACTCAGTTGGTCTCTACATGATCAATAA  1182

Query  230   TACACACGGCTTCGT  244
             |||||||||||||||
Sbjct  1183  TACACACGGCTTCGT  1197



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 11058904780


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5