BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G07650.2 Length=3231 Score E Sequences producing significant alignments: (Bits) Value Ahg470791 jgi|Araly1|470791|fgenesh2_kg.1__745__AT1G07650.1 4896 0.0 Ahg916651 jgi|Araly1|916651|Al_scaffold_0008_1402 1131 0.0 Ahg898471 jgi|Araly1|898471|Al_scaffold_0005_2437 1103 0.0 > Ahg470791 jgi|Araly1|470791|fgenesh2_kg.1__745__AT1G07650.1 Length=3334 Score = 4896 bits (2651), Expect = 0.0 Identities = 3047/3235 (94%), Gaps = 40/3235 (1%) Strand=Plus/Plus Query 1 ATTTTATTATTTTGTATAGAAAAAATGATATATTTACATCGCATATATTTCATCATCGTC 60 |||||||| |||||||||||||| ||||| | ||||||||||||||||||||||||||| Sbjct 95 ATTTTATTGTTTTGTATAGAAAAGATGATTTCCTTACATCGCATATATTTCATCATCGTC 154 Query 61 CTCTTCACACTAATTTTCCATGGGCGTCTTGGTTTTTCCGACAACAATAAACTTCACGAG 120 | |||||||||| || |||||| |||||||| |||||||||| || |||||| |||||| Sbjct 155 TTATTCACACTAACTTCCCATGGCCGTCTTGGATTTTCCGACAGCACTAAACTCCACGAG 214 Query 121 GCCGAAGTGAGGGCATTAAAGGAGATAGGGAAGAAGCTAGGGAAGAAAGATTGGGACTTC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 215 GCCGAAGTGAGGGCATTAAAGGAGATAGGGAAGAAGCTAGGGAAGAAAGATTGGAACTTC 274 Query 181 AACAAAGATCCATGTAGTGGTGAAGGCACTTGGATTGTAACAACTTACACAACCAAAGGG 240 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| | Sbjct 275 AACAAAGATCCATGTAGTGGTGAAGGCAATTGGGTTGTAACAACTTACACAACCAAAGAG 334 Query 241 TTTGAGAGTAATATCACTTGTGATTGCTCCTTTCTTCCTCAAAACTCTTCTTGCCACGTC 300 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 335 TTTGAGAGTAATATCACTTGTGATTGCTCCTTTCTTCCTCCAAACTCTTCTTGCCACGTC 394 Query 301 ATTAGAATTGGCAATTTGGTTGGCAGAGCTCTGAAGTCGCAGAACTTAACAGGCATTGTC 360 ||| | | || | |||||||||||||||||||||||||||||||||| Sbjct 395 ATT---A---G-AA------T-----AGCTCTGAAGTCGCAGAACTTAACAGGCATTGTC 436 Query 361 CCTCCAGAATTCTCTAAGCTTCGTCACCTTAAAGTTTTAGACCTAAGCCGTAACTCTCTG 420 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct 437 CCTCCAGAATTCTCTAAGCTTCGCCACCTTAAAGTTTTAGACCTTAGCCGTAACTCCCTG 496 Query 421 ACTGGTTCCATTCCAAAGGAATGGGCTTCTATGCGCTTGGAAGATTTATCTTTCATGGGG 480 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 497 ACTGGTTCCATTCCAAAGGAATGGGCTTCGATGCGCTTGGAAGATTTATCCTTCATGGGG 556 Query 481 AACCGATTGTCTGGTCCGTTTCCGAAAGTCCTGACCCGCCTTACAATGCTCAGAAACTTG 540 ||||||||||||||||| |||||||||||||| || |||||||||||||||| ||||||| Sbjct 557 AACCGATTGTCTGGTCCATTTCCGAAAGTCCTAACTCGCCTTACAATGCTCAAAAACTTG 616 Query 541 AGCCTAGAAGGAAATCAGTTTTCAGGACCAATCCCTCCTGATATTGGACAGTTGGTTCAT 600 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 617 AGCCTAGAAGGAAATCAGTTTTCAGGACCAATCCCTCCTGATATTGGAAAGTTAGTTCAT 676 Query 601 TTGGAGAAACTTCATCTCCCTTCAAATGCTTTCACTGGTCCATTGACTGAAAAACTTGGA 660 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 677 TTGGAGAAACTTCATCTTCCTTCAAATGCTTTCACTGGTCCATTGACTGAAAAACTTGGA 736 Query 661 TTGCTCAAGAACCTGACTGATATGAGGATAAGTGATAATAATTTCACTGGACCAATACCA 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 737 TTGCTCAAGAACCTGACTGATATGAGGATAAGTGATAATAATTTCACTGGACCAATACCA 796 Query 721 GATTTCATCAGCAATTGGACAAGAATACTGAAACTGCAGATGCATGGTTGCGGTTTGGAT 780 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 797 GATTTCATCGGCAATTGGACAAGAATAATGAAACTGCAGATGCATGGTTGCGGTTTGGAT 856 Query 781 GGTCCGATACCTTCCAGTATTTCTAGCTTAACAAGCTTGACCGACCTGAGAATTAGCGAC 840 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 857 GGTCCGATACCTTCCAGTATTTCTACCTTAACAAGCTTGACCGACCTGAGGATTAGCGAC 916 Query 841 TTAGGAGGCAAACCGTCTTCCTTCCCCCCACT-GAAGAATTTGGAATCTATCAAGACGCT 899 |||||||||||||||||||||||||| | | | |||||||||||| |||||||||||||| Sbjct 917 TTAGGAGGCAAACCGTCTTCCTTCCCTC-AGTTGAAGAATTTGGAGTCTATCAAGACGCT 975 Query 900 GATACTGAGAAAATGCAAAATAATTGGCCCAATTCCAAAATATATTGGGGACT-TGAAGA 958 |||||||||||||||||| ||| ||||||||||||||||||||||||||| | |||||| Sbjct 976 GATACTGAGAAAATGCAATTTAAATGGCCCAATTCCAAAATATATTGGGGA-TATGAAGA 1034 Query 959 AGCTCAAAACACTTGACCTCAGTTTTAATCTCCTAAGTGGTGAGATTCCTTCATCGTTTG 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1035 AGCTCAAAACACTTGACCTCAGTTTTAATCTCCTAAGTGGTGAGATTCCTTCATCGTTTG 1094 Query 1019 AAAATATGAAGAAAGCCGATTTCATTTATTTGACAGGAAACAAATTGACAGGAGGGGTTC 1078 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 1095 AAAATATGAAGAAAGCTGATTTCATTTATTTGACAGGAAACAAATTGACAGGAGGTGTTC 1154 Query 1079 CAAACTACTTTGTCGAAAGAAATAAAAATGTAGATGTTTCTTTTAATAACTTCACCGATG 1138 |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct 1155 CAAACTACTTTGTCGAAAGAAACAAAAATGTAGATGTTTCTTTTAATAACTTTACTGATG 1214 Query 1139 AAAGTTCAATTCCTAGCCATG---ACTGTAACCGAGTTACTTCAAATTTGGTGGAAAGCT 1195 ||||||||||||| | ||| | ||||||||||||| || ||| |||||||| ||| Sbjct 1215 AAAGTTCAATTCCCAAAAATGGTGATTGTAACCGAGTTAGTTTTAATATGGTGGAAGGCT 1274 Query 1196 TCGCCTTGGGGAACAAATCACACAAGGGTTCAACCTGTTTTCTTCAACGCATGCCTTGTG 1255 |||||||| ||||| ||||||||| |||||||||||||||||| | | | ||||||| Sbjct 1275 TCGCCTTG---AACAAGTCACACAAGAATTCAACCTGTTTTCTTCAGCACTTCCCTTGTG 1331 Query 1256 TTCATCCTAAGAGATATCATTTATATAAATTGTACATAAATTGCGGAGGAGGTGAAGTAA 1315 |||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 1332 TTCATCCTAAGAGACATCATATGTATAAATTGTACATAAATTGCGGAGGAGGTGAAGTAA 1391 Query 1316 AAGTGGATAAAGAAATAACATATCAGGCTGATGACGAACCCAAAGGTGCTTCTATGTACG 1375 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1392 AAGTGGATAAAGGAATAACATATCAGGCTGATGACGAACCCAAAGGTGCTTCTATGTACG 1451 Query 1376 TCCTTGGCGCTAACAAGCGCTGGGCGTTGAGCAGCACCGGGAACTTCATGGACAATGATG 1435 |||||||| || || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1452 TCCTTGGC---AA---GCACTGGGCGTTGAGCAGCACCGGGAACTTCATGGACAATGATG 1505 Query 1436 ACGATGCTGATGAGTATACTGTGCAGAACACATCCAGGTTATCAGTTAATGCTTCCTCTC 1495 ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1506 ACGATGCTGATGATTATACTGTGCAGAACACATCCAGGCTATCAGTTAATGCTTCCTCTC 1565 Query 1496 CCAGCTTTGGACTTTATAGGACAGCTCGAGTCTCTCCTTTATCGTTGACTTACTACGGAA 1555 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1566 CCAGCTTTGGACTTTATAGGACTGCTCGAGTCTCTCCTTTATCGTTGACTTACTATGGAC 1625 Query 1556 TCTGTCTTGGAAATGGGAACTACACTGTGAATCTCCACTTTGCTGAGATCATCTTTACCG 1615 | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 1626 TTTGTCTCGGAAATGGGAACTACACTGTGAATCTCCACTTCGCTGAGATCATCTTTACTG 1685 Query 1616 ATGACAATACA-TTATACAGTCTCGGCAAACGTTTGTTTGATATTTATGTTCAGGATCAG 1674 ||||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1686 ATGACAACACACTT-TACAGTCTCGGCAAACGTTTGTTCGATATTTATGTTCAGGATCAG 1744 Query 1675 TTGGTGATTAAAAACTTTAACATTCAAGAAGCTGCTCGAGGATCAGGTAAGCCAATCATT 1734 || ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct 1745 TTAGTGATTAAAAACTTTAACATTCAAGAAGCAGCTCGAGGATCAGGTAAGCCAGTCATA 1804 Query 1735 AAATCGTTTCTGGTAAATGTAACGGACCATACTCTGAAGATTGGTTTGCGATGGGCTGGC 1794 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1805 AAATCGTTTCTGGTAAATGTAACGGACCATACTCTGAAGATCGGTTTGCGATGGGCTGGC 1864 Query 1795 AAAGGGACAACAGGCATTCCGATTAGAGGGGTATATGGTCCTATGATTTCAGCTATATCT 1854 ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1865 AAAGGAACAACAGGCATTCCAATTAGAGGAGTATATGGTCCTATGATTTCAGCTATATCT 1924 Query 1855 GTGGAACCCAATTTCAAACCTCCGGTATATTATGACACAAAGGATATCATACTAAAAGTG 1914 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| | Sbjct 1925 GTGGAACCCAATTTCAAACCTCCGGTATATTATGACATAAAGGGTATCATACTAAAAGCG 1984 Query 1915 GGGGTACCTGTCGCTGCAGCAACACTTCTTTTGTTTATCATAGTGGGTGTATTCTGGaaa 1974 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1985 GGGGTACCTGTTGCTGCAGCAACACTTCTTTTGTTTATCATAGTGGGTGTATTCTTGAAA 2044 Query 1975 aaaaGGCGTGACAAAAATGATATTGACAAAGAGCTAAGGGGTCTAGATCTTCAAACTGGA 2034 ||||| ||||||||||||| |||||| |||||| |||||||| ||||||||||||||||| Sbjct 2045 AAAAGACGTGACAAAAATGCTATTGATAAAGAGTTAAGGGGTTTAGATCTTCAAACTGGA 2104 Query 2035 ACTTTTACTCTACGGCAGATAAAAGCAGCCACTGATAATTTCGATGTAACAAGAAAGATT 2094 |||||||||||||| |||||||||||||||||||| ||||| |||||||||| ||||||| Sbjct 2105 ACTTTTACTCTACGACAGATAAAAGCAGCCACTGACAATTTTGATGTAACAAAAAAGATT 2164 Query 2095 GGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGAATTATCTGAGGGGAAATTAATTGCA 2154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2165 GGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGAATTATCTGAGGGGAAATTAATCGCA 2224 Query 2155 GTTAAACAACTGTCTGCAAAATCGAGGCAGGGAAATCGCGAGTTTGTAAATGAGATAGGA 2214 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2225 GTTAAACAGCTGTCTGCAAAATCGAGGCAGGGAAATCGCGAGTTTGTAAATGAGATAGGA 2284 Query 2215 ATGATCTCAGCTCTTCAACATCCGAATCTTGTGAAGCTATATGGATGTTGTGTTGAAGGA 2274 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2285 ATGATCTCAGCTCTTCAACATCCAAATCTTGTGAAGCTATATGGATGTTGTGTTGAAGGA 2344 Query 2275 AACCAATTGATATTGGTGTATGAGTACTTGGAGAACAACTGTCTATCTCGAGCGTTATTT 2334 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||| Sbjct 2345 AACCAATTGATATTGGTGTATGAGTATTTGGAGAACAACTGTCTATCTCGTGCGCTATTT 2404 Query 2335 GGAAAGGATGAGAGTTCTAGACTGAAACTAGACTGGTCAACAAGGAAGAAGAtttttttG 2394 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2405 GGAAAGGATGAGAGTTCTAGACTGAAACTAGACTGGTCAACAAGGAAGAAGATATTTTTG 2464 Query 2395 GGGATAGCCAAGGGACTGACATTTCTCCATGAAGAATCTAGGATAAAGATTGTACACAGA 2454 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2465 GGGATAGCTAAAGGACTGACATTTCTCCATGAAGAATCTAGGATAAAGATTGTACACAGA 2524 Query 2455 GATATAAAGGCAAGCAATGTGTTACTCGATAAGGATCTCAACGCTAAAATTTCTGACTTT 2514 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2525 GATATAAAGGCAAGCAACGTGTTACTCGATAAGGATCTCAACGCTAAAATTTCTGACTTT 2584 Query 2515 GGTTTGGCAAAGCTGAATGATGATGGAAACACACACATCAGCACTCGTATTGCAGGAACT 2574 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 2585 GGTTTGGCAAAGCTGAACGATGATGGAAATACACACATCAGCACTCGTATTGCAGGAACT 2644 Query 2575 ATAGGTTATATGGCTCCTGAATATGCAATGCGTGGTTACTTGACTGAAAAAGCGGATGTT 2634 ||||||||||||||||| || ||||| |||||||| ||| |||||||||||||||||||| Sbjct 2645 ATAGGTTATATGGCTCCCGAGTATGCGATGCGTGGCTACCTGACTGAAAAAGCGGATGTT 2704 Query 2635 TATAGCTTCGGCGTCGTTGCACTCGAAATCGTTAGTGGAAAGAGTAACACAAACTTTAGG 2694 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2705 TATAGCTTTGGCGTCGTTGCACTCGAAATCGTGAGTGGAAAGAGTAACACAAACTTTAGG 2764 Query 2695 CCAACCGAGGACTTTGTTTACCTTCTTGATTGGGCTTACGTTTTGCAAGAGAGAGGAAGC 2754 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2765 CCAACCGAGGACTTTGTTTACCTTCTTGATTGGGCTTACGTTTTGCAAGAGAGGGGAAGC 2824 Query 2755 TTACTAGAGCTGGTTGATCCAACGTTAGCCTCAGATTACTCAGAAGAGGAAGCCATGTTG 2814 |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| || Sbjct 2825 TTACTAGAGCTGGTTGATCCAACGTTAGTCTCAAATTACTCAGAAGAGGAAGCCATGCTG 2884 Query 2815 ATGCTGAACGTGGCATTGATGTGCACTAACGCATCACCGACTCTAAGGCCTACAATGTCG 2874 |||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| Sbjct 2885 ATGCTGAACGTGGCATTGATGTGCACTAGCGCGTCACCGACGCTAAGGCCTACAATGTCA 2944 Query 2875 CAGGTGGTGAGTCTCATAGAGGGGAAGACAGCGATGCAAGAGTTGCTGTCGGATCCGAGC 2934 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2945 CAGGTGGTGAGTCTCTTAGAGGGAAAGACAGCGATGCAAGAGTTGCTGTCGGATCCGAGC 3004 Query 2935 TTCTCAACGGTTAACCCGAAGCTTAAAGCCTTGAGGAACCATTTTTGGCAAAACGAGCTG 2994 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 3005 TTCTCAACGGTTAACCCGAAGCTTAAAGCCTTAAGGAACCATTTTTGGCAAAACGAGCTG 3064 Query 2995 AGCAGATCGCTTAGCTTCTCCACAAGCGGGCCTCGTACTGCCTCTGCTAACTCACTCGTT 3054 |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 3065 AGCAGATCACTTAGCTTCTCCACAAGCGGGCCTCGTACTGGCTCTGCTAACTCACTCGTT 3124 Query 3055 GATGCAGAGGAGAAAACCGGACTTTTGGATTAAGTTCTTAAAATTCCAAATTT-TTAGTG 3113 ||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||||| Sbjct 3125 GATGCTGAGGAGAAAACTGGACTTTTGGATTAGGTTCTTAAAATTCCAAAAAAATTAGTG 3184 Query 3114 AAATTCGCGAGAGTAATGAAGTTTTCACCAATGAAAA-GAGTTTGCTTTTAAGTGTATAT 3172 | ||||| | |||| |||||||||||||||| |||| ||||||||||| |||||||||| Sbjct 3185 AGATTCGTGGGAGTGGTGAAGTTTTCACCAATAAAAAAGAGTTTGCTTTCAAGTGTATAT 3244 Query 3173 ATAGTTGGAAGTTCTTTAGCTCAAAATAGTGTTATATGAACTAA-AGTGATCTCA 3226 |||||||||||||||||||||| |||||||||||||||||| || | |||||||| Sbjct 3245 ATAGTTGGAAGTTCTTTAGCTCGAAATAGTGTTATATGAAC-AAGATTGATCTCA 3298 > Ahg916651 jgi|Araly1|916651|Al_scaffold_0008_1402 Length=2856 Score = 1131 bits (612), Expect = 0.0 Identities = 1367/1722 (79%), Gaps = 90/1722 (5%) Strand=Plus/Plus Query 1278 ATATAAATTGTACATAAATTGCGGAGGAGGTGAAGTAAAAGTGGATAAAGAAATA-ACAT 1336 |||||| |||||||||| || || |||| |||| ||||||| |||||||||| | |||| Sbjct 1050 ATATAAGCTGTACATAAACTGTGGGGGAGATGAAATAAAAGTTGATAAAGAAA-AGACAT 1108 Query 1337 ATC-AGGCTGATGA-CGA-ACCCAAAGGTGCTTCTATGTACGTCCT-TGGCGCTAACAAG 1392 | | | ||| | | || || || | || ||| | || || |||| || ||||| Sbjct 1109 A-CGAAGCT-AACATAGAGGGCC-AACGACCTACTACATTTGT-CTATGGCTCTGACAAG 1164 Query 1393 CGCTGGGCGTTGAGCAGCACCGGGA-ACTTCATGGACAATGA--TGAC-GATGCT-GATG 1447 | |||||| || || |||||| ||| ||||||| | ||||| | || || | | |||| Sbjct 1165 CACTGGGCATTTAGTAGCACC-GGACACTTCAT-G--AATGATCTTACAGAAG-TGGATG 1219 Query 1448 AGTATACTGTG-CAGAACACATCCAGGTTATCAGTTAATGCTTCCTCTCCCAGCTTT-G- 1504 | || || ||| | ||||| || | ||| || |||||||| ||||| || ||| | Sbjct 1220 ACTACACCGTGTC-TAACACCTCTACACTATTAGCCAATGCTTCTTCTCCAAG-TTTCGT 1277 Query 1505 GACTTTATAGGACAGCTC-GAGTCTCTCCTTTATCGTTGACTTACTACGGAATCTGTCTT 1563 | ||||| | ||| |||| || | |||||| | | |||||||||||||||| ||||||| Sbjct 1278 G-CTTTACAAGACGGCTCGGA-TTTCTCCTCTCTTGTTGACTTACTACGGACTCTGTCTG 1335 Query 1564 GGAAATGGGAACTACACTGTGAATCTCCACTTTGCTGAGATCATCTTTACCGA-TGACAA 1622 || |||||| | |||||||||| ||||||||| || ||||| || |||||| | |||| Sbjct 1336 GGCAATGGGGAGTACACTGTGAGTCTCCACTTCGCAGAGATAATATTTACC-AGCGACAG 1394 Query 1623 TACATTATACAGTCTCGGCAAACGTTTGTTTGATATTTATGTTCAGGATCAGTTGGTGAT 1682 |||||| |||||||| |||||||| | || ||||||||||||||||| ||||| |||| Sbjct 1395 TACATTCTACAGTCTTGGCAAACGAGTCTTCGATATTTATGTTCAGGAGAAGTTGATGAT 1454 Query 1683 TAAAAACTTTAACATTCAAGAAGCTGCTCGAGGATCAGGTAAGCCAATCATTAAA-TCGT 1741 ||||||||| |||||| ||||||||||| | ||||| || |||||||||| |||| | | Sbjct 1455 TAAAAACTTCAACATTAAAGAAGCTGCTGGTGGATCGGGCAAGCCAATCA-TAAAGACAT 1513 Query 1742 TTCTGGTAAATGTAACGGACCATACTCTGAAGATTGGTTTGCGATGGGCTGGCAAAGGGA 1801 || ||||||||||||| | || | ||||||||| | ||| | |||||||||||||||| Sbjct 1514 TTGTGGTAAATGTAACAAATCACATTCTGAAGATCAGCTTGAGGTGGGCTGGCAAAGGGA 1573 Query 1802 CAAC-AGGCATTCCGATTAGAGGGGTATATGGTCCTATGATTTCAGCTATATCTGTGGAA 1860 |||| | || |||| |||||||| || ||||| || ||||| ||||||||||| || ||| Sbjct 1574 CAACTACGC-TTCCAATTAGAGGAGTTTATGGCCCAATGATCTCAGCTATATCAGTTGAA 1632 Query 1861 CCCAATTTCAAACCTCCGGTA-TATTATGACACA-AAGGATATCATACTAAAAGT-GGGG 1917 || ||||| ||| |||||| | || |||||| | ||| ||||| | |||| ||| || Sbjct 1633 CCTAATTTTAAATCTCCGG-AGCATGATGACA-AGAAGAATATCCTGCTAATAGTAGGAA 1690 Query 1918 GTACCT-GTCGCTGCAGCAACACTTC-TTTT-G--TTTATCATAGTG--GGTGT-ATTCT 1969 || | || || |||| || | || |||| | | |||| |||| | | || | Sbjct 1691 TTA--TAGTTGCCGCAGTAA-TCCTCATTTTGGCCATCATCACAGTGATCATTTGCTTGT 1747 Query 1970 GGaaaaaaaGGCGTGACAAAAATG-ATATTGACAAAGAGCTAAGGGGTCTAGATCTTCAA 2028 ||| || |||| || ||||||||| | || ||||||||||| |||||| |||||||||| Sbjct 1748 GGAGAAGAAGGTGTTACAAAAATGCA-ATGGACAAAGAGCTTAGGGGTTTAGATCTTCAG 1806 Query 2029 ACTGGAACTTTTACTCTACGGCAGATAAAAGCAGCCACTGATAA-TTTCGATGTAACAAG 2087 |||| |||||||||||| || || ||||||||||| ||| |||| ||| |||| | ||| Sbjct 1807 ACTGAAACTTTTACTCTTCGACATATAAAAGCAGCTACTAATAACTTT-GATGCAGCAA- 1864 Query 2088 A-AAGATTGGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGAATTATCTGAGGGGA-AA 2145 | |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | Sbjct 1865 ACAAGATTGGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGTGTTATCAGAGGGGAGGA 1924 Query 2146 TTAATTGCAGTTAAACAACTGTCTGCAAAATCGAGGCAGGGAAATCGCGAGTTTGTAAAT 2205 | ||||| |||||| || ||||| |||| || | || |||| || |||||||| ||| Sbjct 1925 -TGATTGCGGTTAAAAAATTGTCTTCAAAGTCCAATCAAGGAAGCCGGGAGTTTGTGAAT 1983 Query 2206 GAGATAGGAATGATCTCAGCTCTTCAACATCCGAATCTTGTGAAGCTATATGGATGTTGT 2265 ||| |||| ||||||||| |||| |||||||| |||||||||||||||||||||| |||| Sbjct 1984 GAGTTAGGCATGATCTCATCTCTACAACATCCAAATCTTGTGAAGCTATATGGATCTTGT 2043 Query 2266 GTTGAAGGA-AACCAATTGATATTGGTGTATGAGTACTTGGAGAACAACTGTCTATCTCG 2324 | || || | || ||| |||||||||| || ||||| ||||||||||||||||| ||||| Sbjct 2044 G-TGGAGAAGAAGCAACTGATATTGGTCTACGAGTATTTGGAGAACAACTGTCTTTCTCG 2102 Query 2325 AGCGT-TATTTGGAAAGGATGAGAGTTCTAGACTGAAACTAGACTGGTCAACAAGGAAGA 2383 || | || || || || || ||||||||| |||| ||| |||| ||||||| Sbjct 2103 TGC-TCTA-TT--------TG-GA--TCCAGACTGAAATTAGAATGGCCAACGAGGAAGA 2149 Query 2384 AGAtttttttGGGGATAGCCAAGGGACTGACATTTCTCCATGAAGAATCTAG-GATAAAG 2442 |||||| |||||| ||||| || ||||| | ||||||||| ||||||||| | ||| ||| Sbjct 2150 AGATTTGTTTGGGCATAGCTAAAGGACTAAAATTTCTCCACGAAGAATCT-GCGATCAAG 2208 Query 2443 ATTGTACACAGAGATATAAAGGCAAGCAATGTGTTACTCGATAAGGATCTCAACGCTAAA 2502 ||||| ||||| ||||||||||| ||||| ||||| || ||| | ||||||||||| ||| Sbjct 2209 ATTGTGCACAGGGATATAAAGGCGAGCAACGTGTTGCTAGATGACGATCTCAACGCCAAA 2268 Query 2503 ATTTCTGACTTTGGTTTGGCAAAGCTGAATGATGATG-GAAACACACACATCAGCACTCG 2561 || |||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||| Sbjct 2269 ATCTCTGACTTTGGTTTGGCAAAGCTGAATGATGATGAGAA-CACACACATCAATACTCG 2327 Query 2562 TATTGCAGGAACTAT-AGGTTATATGGCTCCTGAATATGCAATGCGTGGTTACTTGACTG 2620 ||| || ||||| | ||| ||||||||||| ||||| || ||||||||||| ||||||| Sbjct 2328 TATCGCCGGAAC-ACCAGGATATATGGCTCCGGAATACGCCATGCGTGGTTATTTGACTG 2386 Query 2621 AAAAAGCGGATGTTTATAGCTTCGGCGTCGTTGCACTCGAAATCGTTAGTGGAAAGAGTA 2680 ||||||| |||||||||||||| ||||||||||| || ||||| || ||||||||||||| Sbjct 2387 AAAAAGCTGATGTTTATAGCTTTGGCGTCGTTGCCCTTGAAATTGTCAGTGGAAAGAGTA 2446 Query 2681 ACACAAACTTTAGGCCAACCGAGGACTTTGTTTACCTTCTTGATTGGGCTTACGTTTTGC 2740 || ||||| | | |||| |||| |||| | | |||||||||| ||| |||||||||| Sbjct 2447 ACTCAAACGTCAAACCAAGCGAGAACTTGGAGTGCCTTCTTGATCAGGCCTACGTTTTGC 2506 Query 2741 AAGAGAGAGGAA-GCTTACTAGAGCT-GGTTGATCCAACGTTAGCCTCAGATTACTCAGA 2798 |||| | ||| | |||||||||| || |||||||||| | ||| |||| |||||| | Sbjct 2507 AAGACA-AGGGATGCTTACTAGA-CTTGGTTGATCCAGTGCTAGATTCAGCCTACTCAAA 2564 Query 2799 AGAGGAAGCCATGTTGATGCT-GAACGTGGCATTGAT-GTGCACTAACGCATCACCGAC- 2855 ||||||||| ||| |||| || |||||||||| | || |||||||||| | || ||| | Sbjct 2565 AGAGGAAGCAATGGTGAT-CTTGAACGTGGCACT-ATTGTGCACTAACACGTCCCCGGCG 2622 Query 2856 TCTAAGGCCTACAATGTCGCAGGTGGTGAGTCTCATAGAGGGGAAGACAGCGATGCAAGA 2915 | ||||||| | |||||||||||| ||||||||| | |||| ||| | || ||| || | Sbjct 2623 T-TAAGGCCAAAAATGTCGCAGGTCGTGAGTCTCCTCGAGGAAAAGGCCGCAATGAAAAA 2681 Query 2916 GTTGCTGTCGGATCCGAGCTTCTCAACGGTTAACCCGAAGCT 2957 || ||||||| || | ||||||| | || ||||||||||| Sbjct 2682 CCTGTTGTCGGACCCAAACTTCTCAGCAGTGAACCCGAAGCT 2723 > Ahg898471 jgi|Araly1|898471|Al_scaffold_0005_2437 Length=2820 Score = 1103 bits (597), Expect = 0.0 Identities = 1300/1631 (80%), Gaps = 81/1631 (5%) Strand=Plus/Plus Query 1380 TGGCGCTAACAAGCGCTGGGCGTTGAGCAGCACCGGGA-ACTTCATGGACAATGA--TGA 1436 |||| || |||||| |||||| || ||||||||| ||| ||||||| | ||||| | | Sbjct 1113 TGGCTCTGACAAGCACTGGGCATTTAGCAGCACC-GGACACTTCAT-G--AATGATCTTA 1168 Query 1437 C-GATGCT-GATGAGTATACTGTG-CAGAACACATCCAGGTTATCAGTTAATGCTTCCTC 1493 | || | | ||||| || || ||| | ||||| || | ||| || | ||||||| || Sbjct 1169 CAGAAG-TGGATGACTACACCGTGTC-TAACACCTCTACACTATTAGCTGATGCTTCGTC 1226 Query 1494 TCCCAGCTTTGGACTT-TATAGGACAGCTC-GAGTCTCTCCTTTATCGTTGACTTACTAC 1551 ||| || ||| | || || | ||| |||| || | |||||| | | ||||||||||||| Sbjct 1227 TCCAAG-TTTCGTGTTGTACAAGACGGCTCGGA-TTTCTCCTCTCTTGTTGACTTACTAC 1284 Query 1552 GGAATCTGTCTTGGAAATGGGAACTACACTGTGAATCTCCACTTTGCTGAGATCATCTTT 1611 ||| ||||||| || |||||| | |||||||||| ||||||||| || ||||| || ||| Sbjct 1285 GGACTCTGTCTCGGCAATGGGGAGTACACTGTGAGTCTCCACTTCGCAGAGATAATATTT 1344 Query 1612 ACCGA-TGACAATACATTATACAGTCTCGGCAAACGTTTGTTTGATATTTATGTTCAGGA 1670 ||| | ||||||||||| |||||||| || ||| | |||| ||||||||||||||||| Sbjct 1345 ACC-AGCGACAATACATTCTACAGTCTTGGGAAAAGAGTGTTCGATATTTATGTTCAGGA 1403 Query 1671 TCAGTTGGTGATTAAAAACTTTAACATTCAAGAAGCTGCTCGAGGATCAGGTAAGCCAAT 1730 | ||||| ||||||||||||| |||||| ||||||||||| | ||||| || |||||||| Sbjct 1404 TAAGTTGATGATTAAAAACTTCAACATTAAAGAAGCTGCTGGTGGATCGGGGAAGCCAAT 1463 Query 1731 CATTAAA-TCGTTTCTGGTAAATGTAACGGACCATACTCTGAAGATTGGTTTGCGATGGG 1789 || |||| | ||| ||||| ||||||| | || | ||||||||| | ||| | |||| Sbjct 1464 CA-TAAAGACATTTTTGGTAGATGTAACAAATCACAATCTGAAGATCAGCTTGAGGTGGG 1522 Query 1790 CTGGCAAAGGGACAAC-AGGCATTCCGATTAGAGGGGTATATGGTCCTATGATTTCAGCT 1848 |||||||||||||||| | || |||| |||||||| || || || |||||||| ||||| Sbjct 1523 CTGGCAAAGGGACAACTACGC-TTCCAATTAGAGGAGTTTACGGCCCTATGATCTCAGCC 1581 Query 1849 ATATCTGTGGAACCCAATTTCAAACCTCCGGTA-TATTATGACACA-AAGGATATCATAC 1906 ||||| || ||||| ||||| ||| |||||| | || |||||| | ||| ||||| ||| Sbjct 1582 ATATCAGTTGAACCTAATTTTAAATCTCCGG-AGCATGATGACA-AGAAGAATATCCTAC 1639 Query 1907 TAAAAGT-GGGGGTACCT-GTCGCTGCAGCAACACTTC-TT-TTGT--TTATCATAGTG- 1959 ||| ||| || || | || || |||| || | || || | || | |||| |||| Sbjct 1640 TAATAGTAGGAATTA--TAGTTGCCGCAGTAA-TCCTCATTGTGGTCATCATCACAGTGA 1696 Query 1960 -GGTGT-ATTCTGGaaaaaaaGGCGTGACAAAAATG-ATATTGACAAAGAGCTAAGGGGT 2016 | | || ||||||| |||| || ||||||||| | || ||||||||||| |||||| Sbjct 1697 TCATTTGCTTGTGGAAAAGAAGGTGTTACAAAAATGCA-ATGGACAAAGAGCTGAGGGGT 1755 Query 2017 CTAGATCTTCAAACTGGAACTTTTACTCTACGGCAGATAAAAGCAGCCACTGATAA-TTT 2075 |||||||||| |||||||| || ||||| || || |||||||| |||||| |||| ||| Sbjct 1756 TTAGATCTTCAGACTGGAACCTTCACTCTTCGACATATAAAAGCGGCCACTAATAACTTT 1815 Query 2076 CGATGTAACAAGA-AAGATTGGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGAATTAT 2134 |||| | ||| | |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1816 -GATGCAGCAA-ACAAGATTGGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGTGTTAT 1873 Query 2135 CTGAGGGGA-AATTAATTGCAGTTAAACAACTGTCTGCAAAATCGAGGCAGGGAAATCGC 2193 | ||||||| | ||||| |||||| || ||||| |||| || | || |||| || Sbjct 1874 CCGAGGGGAGGA-CGATTGCGGTTAAAAAATTGTCTTCAAAGTCCAATCAAGGAAGCCGA 1932 Query 2194 GAGTTTGTAAATGAGA-TAGGAATGATCTCAGCTCTTCAACATCCGAATCTTGTGAAGCT 2252 |||||||| ||||| | |||| ||||||||| |||| |||||||| ||||||||||| || Sbjct 1933 GAGTTTGTGAATGA-ATTAGGGATGATCTCATCTCTACAACATCCAAATCTTGTGAAACT 1991 Query 2253 ATATGGATGTTGTGTTGAAGGA-AACCAATTGATATTGGTGTATGAGTACTTGGAGAACA 2311 |||||||||||||| || || | || ||| |||||||||| || ||||| |||||||||| Sbjct 1992 ATATGGATGTTGTG-TGGAGAAGAAGCAACTGATATTGGTCTACGAGTATTTGGAGAACA 2050 Query 2312 ACTGTCTATCTCGAGCGT-TATTTGGAAAGGATGAGAGTTCTAGACTGAAACTAGACTGG 2370 ||||||| ||||| || | || || || || || ||||||||| |||| ||| Sbjct 2051 ACTGTCTTTCTCGTGC-TCTA-TT--------TG-GA--TCGAGACTGAAATTAGAATGG 2097 Query 2371 TCAACAAGGAAGAAGAtttttttGGGGATAGCCAAGGGACTGACATTTCTCCATGAAGAA 2430 |||||||||||||||||| |||||| ||||| || ||||| |||||||||||||||||| Sbjct 2098 CCAACAAGGAAGAAGATTTGTTTGGGCATAGCTAAAGGACTAACATTTCTCCATGAAGAA 2157 Query 2431 TCTAG-GATAAAGATTGTACACAGAGATAT-AAAGGCAAGCAATGTGTTACTCGATAAGG 2488 ||| | ||| |||||||| ||||| ||||| |||| | ||||| ||||| || ||| ||| Sbjct 2158 TCT-GTGATCAAGATTGTGCACAGGGATATTAAAG-CGAGCAACGTGTTGCTAGATGAGG 2215 Query 2489 ATCTCAACGCTAAAATTTCTGACTTTGGTTTGGCAAAGCTGAATGATGATGGAAACACAC 2548 ||||||| || ||||| |||||||||||||||||||||||||||||||||| |||||| | Sbjct 2216 ATCTCAATGCCAAAATCTCTGACTTTGGTTTGGCAAAGCTGAATGATGATGAAAACACGC 2275 Query 2549 ACATCAGCACTCGTATTGCAGGAACTAT-AGGTTATATGGCTCCTGAATATGCAATGCGT 2607 |||||| ||||||||| || ||||| | ||| ||||||||||| ||||| || ||||| Sbjct 2276 ACATCAACACTCGTATCGCCGGAAC-ACCAGGATATATGGCTCCGGAATACGCCATGCGG 2334 Query 2608 GGTTACTTGACTGAAAAAGCGGATGTTTATAGCTTCGGCGTCGTTGCACTCGAAATCGTT 2667 ||| | ||||| |||||||| |||||||||||||| ||||||||||| || |||||||| Sbjct 2335 GGTCATTTGACCGAAAAAGCAGATGTTTATAGCTTTGGCGTCGTTGCCCTTGAAATCGTC 2394 Query 2668 AGTGGAAAGAGTAACACAAACTTTAGGC--C-AACCGAGGACTTTGTTTACCTTCTTGAT 2724 ||||||||||||||| ||||| | | | | || |||| |||| | | |||||||||| Sbjct 2395 AGTGGAAAGAGTAACTCAAACGTCAAACAACCAAGCGAGAACTTGGAGTGCCTTCTTGAT 2454 Query 2725 TGGGCTTACGTTTTGCAAGAGA-GAGGAAGCTTACTAGAGCT-GGTTGATCCAACGTTAG 2782 ||| |||||||||||||| | | ||| |||||||||| || |||||| ||| | ||| Sbjct 2455 CAGGCCTACGTTTTGCAAGACATG-GGATGCTTACTAGA-CTTGGTTGACCCAGTGCTAG 2512 Query 2783 CCTCAGATTACTCAGAAGAGGAAGCCATGTTGATGCT-GAACGTGGCATTGATGTGCACT 2841 |||| ||||||| |||||||||| ||| |||| || ||||||||| | ||||||||| Sbjct 2513 GTTCAGCTTACTCAAAAGAGGAAGCAATGGTGAT-CTTGAACGTGGCGCTAATGTGCACT 2571 Query 2842 AACGCATCACCGAC-TCTAAGGCCTACAATGTCGCAGGTGGTGAGTCTCATAGAGGGGAA 2900 ||| | || ||| | | ||||||| | |||||||||||| ||||||||| | |||| || Sbjct 2572 AACACGTCCCCGGCGT-TAAGGCCAAAAATGTCGCAGGTCGTGAGTCTCCTCGAGGAAAA 2630 Query 2901 GACAGCGATGCAAGAGTTGCTGTCGGATCCGAGCTTCTCAACGGTTAACCCGAAGCTTAA 2960 ||| || ||| || | || ||||||| || | ||||||| | || ||||||||||| || Sbjct 2631 GACCGCAATGAAAAACCTGTTGTCGGACCCAAACTTCTCAGCAGTGAACCCGAAGCTGAA 2690 Query 2961 AGCCTTGAGGA 2971 || || |||| Sbjct 2691 GGCTTTAAGGA 2701 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 121936463892 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5