BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT1G09210.1

Length=1745
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg919674 jgi|Araly1|919674|scaffold_100955.1                       1986    0.0  
  Ahg471010 jgi|Araly1|471010|fgenesh2_kg.1__964__AT1G09210.1         1930    0.0  
  Ahg914924 jgi|Araly1|914924|Al_scaffold_0001_5178                   1086    0.0  


> Ahg919674 jgi|Araly1|919674|scaffold_100955.1
Length=1316

 Score = 1986 bits (1075),  Expect = 0.0
 Identities = 1246/1326 (94%), Gaps = 21/1326 (2%)
 Strand=Plus/Plus

Query  72    CTCCGATCTGAGttttttttAGCAATGGCGAAAATGATTC-CTAGCCTCGTCTCTCTAAT  130
             ||||||||||||   ||||||||||||||| |||| | ||  |||| |||||||||| ||
Sbjct  1     CTCCGATCTGAG---TTTTTAGCAATGGCG-AAATTAGTCAATAGCATCGTCTCTCTGAT  56

Query  131   TCTTATCGGTCTTGTTGCGATCGCCTCCGCCGCAGTTATTTTCGAGGAGCGCTTTGATGA  190
             |||||||||||| || |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct  57    TCTTATCGGTCTCGTCGCGATCGCCTCCGCGGCAGTTATCTTCGAGGAGCGCTTTGATGA  116

Query  191   TGGCTGGGAGAA-CAGATGGGTTAAATCTGAGTGGAAGAAGGATGATAACACTGCTGGGG  249
             ||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  117   TGGATGGGA-AAGCAGATGGGTTAAATCTGAGTGGAAGAAGGATGATAACACTGCTGGGG  175

Query  250   AGTGGAAGCACACTGCGGGAAATTGGTCTGGTGACGCTAACGATAAAGGTATCCAGACCA  309
             ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  176   AGTGGAAACACACTGCGGGAAATTGGTCTGGTGACTCTAACGATAAAGGTATCCAGACCA  235

Query  310   GTGAAGACTACAGATTCTACGCCATTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACA  369
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  236   GTGAGGACTACAGATTCTACGCCATTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACA  295

Query  370   AGACCTTAGTCTTCCAATTCTCAGTCAAGCACGAGCAAAAGCTTGACTGCGGTGGTGGCT  429
             | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct  296   AAACCTTAGTCTTCCAATTCTCAGTCAAGCACGAGCAAAAGCTTGACTGTGGTGGTGGCT  355

Query  430   ACATGAAGCTACTAAGTGGTGATGTTGACCAAAAGAAATTTGGTGGAGACACACCATACA  489
             |||||||||| || ||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct  356   ACATGAAGCTGCTCAGTGGTGATGTTGACCAGAAGAAATTTGGTGGAGACACCCCATACA  415

Query  490   GTATCATGTTTGGTCCTGATATCTGTGGCTACAGCACAAAGAAAGTGCATGCTATCCTTA  549
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct  416   GTATCATGTTTGGTCCCGATATCTGTGGCTACAGCACAAAGAAAGTGCATGCTATCCTTA  475

Query  550   CCTATAATGAAGCCAACCACCTGATCAAGAAAGATGTTCCATGTGAAACTGACCAGCTCA  609
             |||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |
Sbjct  476   CCTACAATGAAGCCAACCACCTGATCAAGAAGGATGTTCCATGTGAAACTGATCAGCTTA  535

Query  610   CCCATGTGTACACATTTATCCTCCGCCCAGATGCTACTTACAGCATTCTCATCGACAATG  669
             ||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct  536   CCCATGTGTACACCTTCATCCTCCGCCCAGATGCAACTTACAGCATTCTCATCGACAATG  595

Query  670   TTGAGAAACAAACTGGTAGCCTTTACTCTGACTGGGATCTTCTCCCACCCAAGAAGATCA  729
             ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  596   TTGAGAAGCAAACGGGTAGCCTTTACTCTGACTGGGATCTTCTCCCACCCAAGAAGATCA  655

Query  730   AGGACCCCAGCGCCAAGAAGCCTGAGGACTGGGACGAACAAGAATACATTTCTGACCCTG  789
             ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct  656   AGGACCCCAGCGCCAAGAAGCCTGAGGACTGGGACGACCAAGAATACATTGCTGACCCTG  715

Query  790   AAGACAAGAAACCTGACGGTTACGATGATATCCCTAAGGAGATCCCAGACACCGACTCAA  849
             ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |
Sbjct  716   AAGACAAGAAACCTGACGGATACGATGATATCCCAAAGGAGATCCCAGACACCGACGCTA  775

Query  850   AGAAGCCTGAGGACTGGGATGATGAAGAAGATGGTGAGTGGACTGCCCCAACAATCCCCA  909
             ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct  776   AGAAGCCTGAGGACTGGGATGATGAAGAAGATGGTGAGTGGACTGCCCCCACCATCCCCA  835

Query  910   ACCCTGAGTACA-TGGGTGAATGGAAGCCTAAGCAAATCAAGAACCCCAACTACAAGGGC  968
             ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct  836   ACCCTGAATACAATGG-TGAATGGAAGCCTAAGCAAATCAAGAACCCCAACTACAAGGGC  894

Query  969   AAGTGGGAGGCTCCATTGATTGACAACCCTGACTTCAAGGATGACCCAGAGCTCTACGTC  1028
             |||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct  895   AAGTGGAAGGCTCCATTGATTGATAACCCTGACTTCAAGGATGACCCAGAGCTCTATGTC  954

Query  1029  TTCCCCAAGCTGAAATATGTTGGACTCGAATTGTGGCAGGTGAAATCAGGATCAT-TGTT  1087
             |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||
Sbjct  955   TTCCCCAAGCTGAAGTATGTTGGACTCGAATTGTGGCAGGTGAAATCAGGATC-TCTGTT  1013

Query  1088  CGACAATGTCTTGATCTGCGATGACCCAGACTATGCCAAGAAGTTGGCAGATGAAACATG  1147
              |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  1014  TGACAATGTCTTGATCTGCGATGACCCAGACTATGCCAAGAAGTTGGCAGAGGAAACATG  1073

Query  1148  GGGAAAGCTCAAGGATGCGGAGAAAGCAGCTTTCGATGAGGCTGAGAAGAAGAATGAGGA  1207
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  1074  GGGAAAGCTCAAGGATGCGGAGAAAGCAGCTTTCGATGAGGCTGAGAAGAAGAAAGAGGA  1133

Query  1208  AGAGGAATCCAAGGACGCACCTGCGGAATCTGATGCTGAAGACGAACCAGAGGATGATGA  1267
             ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct  1134  AGAGGAATCCAAGGATGCACCTGCGGAATCTGATGCTGAAGAGGAACCAGAGGATGATGA  1193

Query  1268  AGGAGGAGATGATTCCGATTCTGAATCTAAGGCCGA-G-G-AGACCAAATCAGTAGATAG  1324
             ||||| |  ||| || ||||||||||||||| | || | | ||| |||||||| || || 
Sbjct  1194  AGGAG-A--TGACTCTGATTCTGAATCTAAGACAGATGAGGAGAGCAAATCAGAAGTTAA  1250

Query  1325  CGAGGAAACCT-CTGAGAAAGACGCCACCGCTCATGATGAGCTATAGGTGAAAG-GTT-G  1381
             ||||||||| | | ||||||||||||||||||||||||||||| || ||||| | ||| |
Sbjct  1251  CGAGGAAAC-TGCCGAGAAAGACGCCACCGCTCATGATGAGCTGTAAGTGAAGGAGTTAG  1309

Query  1382  AAGATT  1387
             ||||||
Sbjct  1310  AAGATT  1315


> Ahg471010 jgi|Araly1|471010|fgenesh2_kg.1__964__AT1G09210.1
Length=1520

 Score = 1930 bits (1045),  Expect = 0.0
 Identities = 1198/1271 (94%), Gaps = 13/1271 (1%)
 Strand=Plus/Plus

Query  96    ATGGCGAAAATGATTC-CTAGCCTCGTCTCTCTAATTCTTATCGGTCTTGTTGCGATCGC  154
             |||||| |||| | || |||||||||||||||| |||||||||||||| | | || ||||
Sbjct  1     ATGGCG-AAATTAATCACTAGCCTCGTCTCTCTGATTCTTATCGGTCTCG-T-CG-TCGC  56

Query  155   CTCCGCCGCAGTTATTTTCGAGGAGCGCTTTGATGATGGCTGGGAGAA-CAGATGGGTTA  213
             |||||| |||||||| ||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct  57    CTCCGCGGCAGTTATCTTCGAAGAGCGCTTCGATGATGGATGGGA-AAGCAGATGGGTTA  115

Query  214   AATCTGAGTGGAAGAAGGATGATAACACTGCTGGGGAGTGGAAGCACACTGCGGGAAATT  273
             ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct  116   AATCTGAGTGGAAGAAGGATGATAACACTGCTGGGGAGTGGAAACACACTGCTGGAAATT  175

Query  274   GGTCTGGTGACGCTAACGATAAAGGTATCCAGACCAGTGAAGACTACAGATTCTACGCCA  333
             ||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct  176   GGTCTGGTGACTCTAACGATAAAGGTATCCAGACTAGTGAGGACTACAGATTCTACGCCA  235

Query  334   TTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACAAGACCTTAGTCTTCCAATTCTCAG  393
             ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct  236   TTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACAAAACCTTAGTCTTCCAGTTCTCAG  295

Query  394   TCAAGCACGAGCAAAAGCTTGACTGCGGTGGTGGCTACATGAAGCTACTAAGTGGTGATG  453
             ||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct  296   TCAAGCACGAGCAAAAGCTTGACTGTGGTGGTGGCTACATGAAGCTGCTCAGTGGTGATG  355

Query  454   TTGACCAAAAGAAATTTGGTGGAGACACACCATACAGTATCATGTTTGGTCCTGATATCT  513
             ||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct  356   TTGACCAGAAGAAATTTGGTGGAGACACCCCATACAGTATCATGTTTGGTCCCGATATCT  415

Query  514   GTGGCTACAGCACAAAGAAAGTGCATGCTATCCTTACCTATAATGAAGCCAACCACCTGA  573
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct  416   GTGGCTACAGCACAAAGAAAGTGCATGCTATCCTTACCTACAATGAAGCCAACCACCTGA  475

Query  574   TCAAGAAAGATGTTCCATGTGAAACTGACCAGCTCACCCATGTGTACACATTTATCCTCC  633
             ||||||| |||||||||||||||||||| ||||| |||||||||||||| || |||||||
Sbjct  476   TCAAGAAGGATGTTCCATGTGAAACTGATCAGCTTACCCATGTGTACACCTTCATCCTCC  535

Query  634   GCCCAGATGCTACTTACAGCATTCTCATCGACAATGTTGAGAAACAAACTGGTAGCCTTT  693
             |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct  536   GCCCAGATGCAACTTACAGCATTCTCATCGACAATGTTGAGAAGCAAACGGGTAGCCTTT  595

Query  694   ACTCTGACTGGGATCTTCTCCCACCCAAGAAGATCAAGGACCCCAGCGCCAAGAAGCCTG  753
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  596   ACTCTGACTGGGATCTTCTCCCACCCAAGAAGATCAAGGACCCCAGCGCCAAGAAGCCTG  655

Query  754   AGGACTGGGACGAACAAGAATACATTTCTGACCCTGAAGACAAGAAACCTGACGGTTACG  813
             |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct  656   AGGATTGGGACGACCAAGAATACATTTCTGACCCTGAAGACAAGAAACCTGACGGATACG  715

Query  814   ATGATATCCCTAAGGAGATCCCAGACACCGACTCAAAGAAGCCTGAGGACTGGGATGATG  873
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  716   ATGATATCCCAAAGGAGATCCCAGACACCGACTCAAAGAAGCCTGAGGACTGGGATGATG  775

Query  874   AAGAAGATGGTGAGTGGACTGCCCCAACAATCCCCAACCCTGAGTACATGGGTGAATGGA  933
             ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct  776   AAGAAGATGGTGAGTGGACTGCCCCGACCATCCCCAACCCTGAGTACATGGGTGAATGGA  835

Query  934   AGCCTAAGCAAATCAAGAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACA  993
             ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||
Sbjct  836   AGCCTAAGCAAATCAAGAACCCCAACTACAAGGGCAAGTGGAAGGCACCAATGATTGACA  895

Query  994   ACCCTGACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTGGAC  1053
             ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct  896   ACCCTGACTTCAAGGATGACCCAGAGCTCTATGTCTTCCCCAAGCTGAAGTATGTTGGAC  955

Query  1054  TCGAATTGTGGCAGGTGAAATCAGGATCATTGTTCGACAATGTCTTGATCTGCGATGACC  1113
             ||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||||
Sbjct  956   TCGAATTGTGGCAGGTGAAATCAGGATCGCTGTTTGATAATGTCTTGATCTGCGATGACC  1015

Query  1114  CAGACTATGCCAAGAAGTTGGCAGATGAAACATGGGGAAAGCTCAAGGATGCGGAGAAAG  1173
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct  1016  CAGACTACGCCAAGAAGTTGGCAGATGAAACATGGGGAAAGCTCAAGGATGCGGAAAAAG  1075

Query  1174  CAGCTTTCGATGAGGCTGAGAAGAAGAATGAGGAAGAGGAATCCAAGGACGCACCTGCGG  1233
             |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct  1076  CAGCTTTCGATGAGGCGGAGAAGAAGAATGAGGAAGAGGAATCCAAGGACGCACCTGCAG  1135

Query  1234  AATCTGATGCTGAAGACGAACCAGAGGATGATGAAGGAGGAGATGATTCCGATTCTGAAT  1293
             | |||||||||||||| ||||||||||||||||| |||| |  ||| || ||||||||||
Sbjct  1136  ATTCTGATGCTGAAGAGGAACCAGAGGATGATGATGGAG-A--TGAATCAGATTCTGAAT  1192

Query  1294  CTAAGGCCGAGGAGACCAAATCAGTAGATAGCGAGGAAACCT-CTGAGAAAGACGCCACC  1352
             ||||||| ||||||| |||||||| || |||||||||||| | ||||||||||||| |||
Sbjct  1193  CTAAGGCTGAGGAGAGCAAATCAGAAGTTAGCGAGGAAAC-TGCTGAGAAAGACGCTACC  1251

Query  1353  GCTCATG-ATG  1362
             ||||||| |||
Sbjct  1252  GCTCATGTATG  1262


 Score =  244 bits (132),  Expect = 1e-63
 Identities = 186/210 (89%), Gaps = 11/210 (5%)
 Strand=Plus/Plus

Query  1378  GTTGAAGATTTGAAGACCAAAGTTTTCAGTCTCTTTATTGTTTTATCGTTTTCTTTTGAA  1437
             ||| |||||||||||||||||||||||||  |||||||||||||||| ||| ||||||||
Sbjct  1317  GTTCAAGATTTGAAGACCAAAGTTTTCAGAGTCTTTATTGTTTTATCCTTT-CTTTTGAA  1375

Query  1438  GTATTTTAGCATCTAGT--TT-GTCGGAGA--TAGAAACAAGTTTTAGCAAAACTAAAAG  1492
             |||||||||||||||||  || ||||||||  ||||| ||||||||||||||| ||||| 
Sbjct  1376  GTATTTTAGCATCTAGTAGTTTGTCGGAGAGATAGAATCAAGTTTTAGCAAAATTAAAAT  1435

Query  1493  GGGGATACAATGTCTGTCAGATGCTCATTTTAGACTTTAAAAAACCATGAAGAAGTTTTG  1552
             |||||||||||| ||||| ||||||| |||||||||| ||    | ||||||||||||||
Sbjct  1436  GGGGATACAATGACTGTCGGATGCTCCTTTTAGACTTGAA----C-ATGAAGAAGTTTTG  1490

Query  1553  CAGTTGCTTCTCTTTCTCTACTCTTGTTTC  1582
             ||||||| |||||||||||| |||||||||
Sbjct  1491  CAGTTGCATCTCTTTCTCTAGTCTTGTTTC  1520


> Ahg914924 jgi|Araly1|914924|Al_scaffold_0001_5178
Length=1257

 Score = 1086 bits (588),  Expect = 0.0
 Identities = 911/1068 (85%), Gaps = 18/1068 (2%)
 Strand=Plus/Plus

Query  164   AGTTATTTTCGAGGAGCGCTTTGATGATGGCTGGGAGAACAGATGGGTTAAATCTGAGTG  223
             |||||| ||||||||||| || ||||| || |||||||| |||||||| ||||| || ||
Sbjct  69    AGTTATATTCGAGGAGCGATTCGATGACGGATGGGAGAAGAGATGGGTAAAATCCGACTG  128

Query  224   GAAGAAGGATGATAACACTGCTGGGGAGTGGAAGCACACTGCGGGAAATTGGTCTGGTGA  283
             |||||| ||| | |||||||||||||| ||||| ||||| || |||||||||||||||||
Sbjct  129   GAAGAAAGATAACAACACTGCTGGGGAATGGAAACACACAGCTGGAAATTGGTCTGGTGA  188

Query  284   CGCTAACGATAAAGGTATCCAGACCAGTGAAGACTACAGATTCTACGCCATTTCAGCTGA  343
             ||||||||||||||||||||| || || |||||| ||||||||||||| || ||| ||||
Sbjct  189   CGCTAACGATAAAGGTATCCAAACAAGCGAAGACAACAGATTCTACGCTATATCATCTGA  248

Query  344   GTTCCCTGAATTCAGTAACAAGGACAAGACCTTAGTCTTCCAATTCTCAGTCAAGCACGA  403
              |||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||| ||
Sbjct  249   ATTCCCTGAGTTCAGCAACAAGGACAAGACCCTAGTCTTCCAATTCTCTGTCAAGCATGA  308

Query  404   GCAAAAGCTTGACTGCGGTGGTGGCTACATGAAGCTACTAAGTGGTGATGTTGACCAAAA  463
              || ||||||||||| |||||||| ||||||||| | || ||||||||||||||||| ||
Sbjct  309   ACAGAAGCTTGACTGTGGTGGTGGTTACATGAAGTTGCTTAGTGGTGATGTTGACCAGAA  368

Query  464   GAAATTT-GGTGGAGACACACCATACAGTATCATGTTTGGTCCTGATATCTGTGGCT-AC  521
              |||||| || |||||||| || |||||||| |||||||| |||||||  ||||| | ||
Sbjct  369   -AAATTTCGGAGGAGACACTCCTTACAGTATTATGTTTGGCCCTGATAAATGTGG-TGAC  426

Query  522   AGCACAAAGAAAGTGCATGCTATCCTTACCTATAATG-AAGCCAACCACCTGATCAAGAA  580
             | ||| |||||||| |||||||| ||||| || |||| || | |||||  ||||||||||
Sbjct  427   AACACTAAGAAAGTACATGCTATTCTTACATACAATGGAA-CAAACCATTTGATCAAGAA  485

Query  581   AGATGTTCCATGTGAAACTGACCAGCTCACCCATGTGTACACATTTATCCTCCGCCCAGA  640
              || || |||||||| ||||||||||| || ||||||||||| ||  ||||||| |||||
Sbjct  486   GGAGGTCCCATGTGAGACTGACCAGCTTACTCATGTGTACACCTTCGTCCTCCGTCCAGA  545

Query  641   TGCTACTTACAGCATTCTCATCGACAATGTTGAGAAACAAACTGGTAGCCTTTACTCTGA  700
             ||||||||| || ||| | || |||||||||||||| |||||||||||||| | ||||||
Sbjct  546   TGCTACTTATAGTATTTTGATTGACAATGTTGAGAAGCAAACTGGTAGCCTCTCCTCTGA  605

Query  701   CTGGGATCTTCTCCCACCCAAGAAGATCAAGGACCCCAGCGCCAAGAAGCCTGAGGACTG  760
             ||||||||| |||||| | |||||||| ||||| || || ||||||||||||||||||||
Sbjct  606   CTGGGATCTCCTCCCAGCAAAGAAGATTAAGGATCCAAGTGCCAAGAAGCCTGAGGACTG  665

Query  761   GGACGAACAAGAA-TACATTTCTGACCCTGAAGACAAGAAACCTGACGGT-TACGATGAT  818
             ||| || ||| || |||||| |||| || |||||||  || || | |||  |||||||| 
Sbjct  666   GGATGA-CAAAAAGTACATTCCTGATCCGGAAGACACTAAGCCAG-CGGGATACGATGAC  723

Query  819   ATCCCTAAGGAGATCCCAGACACCGACT-CAAAGAAGCCTGAGGACTGGGATGATGAAGA  877
             |||||||||||||| |||||||| || | ||||||||||||| || |||||||||||| |
Sbjct  724   ATCCCTAAGGAGATTCCAGACACTGA-TGCAAAGAAGCCTGAAGATTGGGATGATGAAAA  782

Query  878   AGATGGTGAGTGGACTGCCCCAACAATCCCCAACCCTGAGTACATGGGTGAATGGAAGCC  937
             |  ||||||||||||| ||||||| || || || || ||||||| ||||| |||||||||
Sbjct  783   ATCTGGTGAGTGGACTACCCCAACCATTCCTAATCCGGAGTACAAGGGTGTATGGAAGCC  842

Query  938   TAAGCAAATCAAGAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCC  997
              ||| ||||||||||||| || ||||||||||||||| |||||||| |||| ||||||||
Sbjct  843   CAAGAAAATCAAGAACCCTAATTACAAGGGCAAGTGGAAGGCTCCAATGATCGACAACCC  902

Query  998   TGACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTGGACTCGA  1057
             ||| ||||||||||||||||| || || |||||||||||  |||||||||||||  | ||
Sbjct  903   TGATTTCAAGGATGACCCAGAACTATATGTCTTCCCCAAATTGAAATATGTTGGGGTGGA  962

Query  1058  ATTGTGGCAGGTGAAATCAGGATCATTGTTCGACAATGTCTTGATCTGCGATGACCCAGA  1117
              ||||||||||||||||| ||||| |||||||||||||| ||| |  |||||||||||||
Sbjct  963   GTTGTGGCAGGTGAAATCTGGATCCTTGTTCGACAATGTATTGGTAAGCGATGACCCAGA  1022

Query  1118  CTATGCCAAGAAGTTGGCAGATGAAACATGGGGAAAGCTCAAGGATGCGGAGAAAGCAGC  1177
              || || ||||||||||| || |||||||||||||||  ||||||||||||| |||||||
Sbjct  1023  GTACGCTAAGAAGTTGGCCGAAGAAACATGGGGAAAGAACAAGGATGCGGAGGAAGCAGC  1082

Query  1178  -TTTCGATGAGGCTGAGAAGAAGAATGA--GGAAGAGGAATCCAAGGA  1222
              ||| || || || |||||||| || ||  |||||||||||| |||||
Sbjct  1083  ATTT-GAAGAAGCAGAGAAGAA-AA-GACAGGAAGAGGAATCAAAGGA  1127



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 65477131155


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5