BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G09210.1
Length=1745
Score E
Sequences producing significant alignments: (Bits) Value
Ahg919674 jgi|Araly1|919674|scaffold_100955.1 1986 0.0
Ahg471010 jgi|Araly1|471010|fgenesh2_kg.1__964__AT1G09210.1 1930 0.0
Ahg914924 jgi|Araly1|914924|Al_scaffold_0001_5178 1086 0.0
> Ahg919674 jgi|Araly1|919674|scaffold_100955.1
Length=1316
Score = 1986 bits (1075), Expect = 0.0
Identities = 1246/1326 (94%), Gaps = 21/1326 (2%)
Strand=Plus/Plus
Query 72 CTCCGATCTGAGttttttttAGCAATGGCGAAAATGATTC-CTAGCCTCGTCTCTCTAAT 130
|||||||||||| ||||||||||||||| |||| | || |||| |||||||||| ||
Sbjct 1 CTCCGATCTGAG---TTTTTAGCAATGGCG-AAATTAGTCAATAGCATCGTCTCTCTGAT 56
Query 131 TCTTATCGGTCTTGTTGCGATCGCCTCCGCCGCAGTTATTTTCGAGGAGCGCTTTGATGA 190
|||||||||||| || |||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 57 TCTTATCGGTCTCGTCGCGATCGCCTCCGCGGCAGTTATCTTCGAGGAGCGCTTTGATGA 116
Query 191 TGGCTGGGAGAA-CAGATGGGTTAAATCTGAGTGGAAGAAGGATGATAACACTGCTGGGG 249
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 117 TGGATGGGA-AAGCAGATGGGTTAAATCTGAGTGGAAGAAGGATGATAACACTGCTGGGG 175
Query 250 AGTGGAAGCACACTGCGGGAAATTGGTCTGGTGACGCTAACGATAAAGGTATCCAGACCA 309
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 176 AGTGGAAACACACTGCGGGAAATTGGTCTGGTGACTCTAACGATAAAGGTATCCAGACCA 235
Query 310 GTGAAGACTACAGATTCTACGCCATTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACA 369
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 GTGAGGACTACAGATTCTACGCCATTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACA 295
Query 370 AGACCTTAGTCTTCCAATTCTCAGTCAAGCACGAGCAAAAGCTTGACTGCGGTGGTGGCT 429
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 296 AAACCTTAGTCTTCCAATTCTCAGTCAAGCACGAGCAAAAGCTTGACTGTGGTGGTGGCT 355
Query 430 ACATGAAGCTACTAAGTGGTGATGTTGACCAAAAGAAATTTGGTGGAGACACACCATACA 489
|||||||||| || ||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 356 ACATGAAGCTGCTCAGTGGTGATGTTGACCAGAAGAAATTTGGTGGAGACACCCCATACA 415
Query 490 GTATCATGTTTGGTCCTGATATCTGTGGCTACAGCACAAAGAAAGTGCATGCTATCCTTA 549
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 GTATCATGTTTGGTCCCGATATCTGTGGCTACAGCACAAAGAAAGTGCATGCTATCCTTA 475
Query 550 CCTATAATGAAGCCAACCACCTGATCAAGAAAGATGTTCCATGTGAAACTGACCAGCTCA 609
|||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |
Sbjct 476 CCTACAATGAAGCCAACCACCTGATCAAGAAGGATGTTCCATGTGAAACTGATCAGCTTA 535
Query 610 CCCATGTGTACACATTTATCCTCCGCCCAGATGCTACTTACAGCATTCTCATCGACAATG 669
||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 536 CCCATGTGTACACCTTCATCCTCCGCCCAGATGCAACTTACAGCATTCTCATCGACAATG 595
Query 670 TTGAGAAACAAACTGGTAGCCTTTACTCTGACTGGGATCTTCTCCCACCCAAGAAGATCA 729
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 596 TTGAGAAGCAAACGGGTAGCCTTTACTCTGACTGGGATCTTCTCCCACCCAAGAAGATCA 655
Query 730 AGGACCCCAGCGCCAAGAAGCCTGAGGACTGGGACGAACAAGAATACATTTCTGACCCTG 789
||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 656 AGGACCCCAGCGCCAAGAAGCCTGAGGACTGGGACGACCAAGAATACATTGCTGACCCTG 715
Query 790 AAGACAAGAAACCTGACGGTTACGATGATATCCCTAAGGAGATCCCAGACACCGACTCAA 849
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | |
Sbjct 716 AAGACAAGAAACCTGACGGATACGATGATATCCCAAAGGAGATCCCAGACACCGACGCTA 775
Query 850 AGAAGCCTGAGGACTGGGATGATGAAGAAGATGGTGAGTGGACTGCCCCAACAATCCCCA 909
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 776 AGAAGCCTGAGGACTGGGATGATGAAGAAGATGGTGAGTGGACTGCCCCCACCATCCCCA 835
Query 910 ACCCTGAGTACA-TGGGTGAATGGAAGCCTAAGCAAATCAAGAACCCCAACTACAAGGGC 968
||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 ACCCTGAATACAATGG-TGAATGGAAGCCTAAGCAAATCAAGAACCCCAACTACAAGGGC 894
Query 969 AAGTGGGAGGCTCCATTGATTGACAACCCTGACTTCAAGGATGACCCAGAGCTCTACGTC 1028
|||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 895 AAGTGGAAGGCTCCATTGATTGATAACCCTGACTTCAAGGATGACCCAGAGCTCTATGTC 954
Query 1029 TTCCCCAAGCTGAAATATGTTGGACTCGAATTGTGGCAGGTGAAATCAGGATCAT-TGTT 1087
|||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 955 TTCCCCAAGCTGAAGTATGTTGGACTCGAATTGTGGCAGGTGAAATCAGGATC-TCTGTT 1013
Query 1088 CGACAATGTCTTGATCTGCGATGACCCAGACTATGCCAAGAAGTTGGCAGATGAAACATG 1147
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1014 TGACAATGTCTTGATCTGCGATGACCCAGACTATGCCAAGAAGTTGGCAGAGGAAACATG 1073
Query 1148 GGGAAAGCTCAAGGATGCGGAGAAAGCAGCTTTCGATGAGGCTGAGAAGAAGAATGAGGA 1207
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1074 GGGAAAGCTCAAGGATGCGGAGAAAGCAGCTTTCGATGAGGCTGAGAAGAAGAAAGAGGA 1133
Query 1208 AGAGGAATCCAAGGACGCACCTGCGGAATCTGATGCTGAAGACGAACCAGAGGATGATGA 1267
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1134 AGAGGAATCCAAGGATGCACCTGCGGAATCTGATGCTGAAGAGGAACCAGAGGATGATGA 1193
Query 1268 AGGAGGAGATGATTCCGATTCTGAATCTAAGGCCGA-G-G-AGACCAAATCAGTAGATAG 1324
||||| | ||| || ||||||||||||||| | || | | ||| |||||||| || ||
Sbjct 1194 AGGAG-A--TGACTCTGATTCTGAATCTAAGACAGATGAGGAGAGCAAATCAGAAGTTAA 1250
Query 1325 CGAGGAAACCT-CTGAGAAAGACGCCACCGCTCATGATGAGCTATAGGTGAAAG-GTT-G 1381
||||||||| | | ||||||||||||||||||||||||||||| || ||||| | ||| |
Sbjct 1251 CGAGGAAAC-TGCCGAGAAAGACGCCACCGCTCATGATGAGCTGTAAGTGAAGGAGTTAG 1309
Query 1382 AAGATT 1387
||||||
Sbjct 1310 AAGATT 1315
> Ahg471010 jgi|Araly1|471010|fgenesh2_kg.1__964__AT1G09210.1
Length=1520
Score = 1930 bits (1045), Expect = 0.0
Identities = 1198/1271 (94%), Gaps = 13/1271 (1%)
Strand=Plus/Plus
Query 96 ATGGCGAAAATGATTC-CTAGCCTCGTCTCTCTAATTCTTATCGGTCTTGTTGCGATCGC 154
|||||| |||| | || |||||||||||||||| |||||||||||||| | | || ||||
Sbjct 1 ATGGCG-AAATTAATCACTAGCCTCGTCTCTCTGATTCTTATCGGTCTCG-T-CG-TCGC 56
Query 155 CTCCGCCGCAGTTATTTTCGAGGAGCGCTTTGATGATGGCTGGGAGAA-CAGATGGGTTA 213
|||||| |||||||| ||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct 57 CTCCGCGGCAGTTATCTTCGAAGAGCGCTTCGATGATGGATGGGA-AAGCAGATGGGTTA 115
Query 214 AATCTGAGTGGAAGAAGGATGATAACACTGCTGGGGAGTGGAAGCACACTGCGGGAAATT 273
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 116 AATCTGAGTGGAAGAAGGATGATAACACTGCTGGGGAGTGGAAACACACTGCTGGAAATT 175
Query 274 GGTCTGGTGACGCTAACGATAAAGGTATCCAGACCAGTGAAGACTACAGATTCTACGCCA 333
||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 176 GGTCTGGTGACTCTAACGATAAAGGTATCCAGACTAGTGAGGACTACAGATTCTACGCCA 235
Query 334 TTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACAAGACCTTAGTCTTCCAATTCTCAG 393
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 236 TTTCAGCTGAGTTCCCTGAATTCAGTAACAAGGACAAAACCTTAGTCTTCCAGTTCTCAG 295
Query 394 TCAAGCACGAGCAAAAGCTTGACTGCGGTGGTGGCTACATGAAGCTACTAAGTGGTGATG 453
||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||
Sbjct 296 TCAAGCACGAGCAAAAGCTTGACTGTGGTGGTGGCTACATGAAGCTGCTCAGTGGTGATG 355
Query 454 TTGACCAAAAGAAATTTGGTGGAGACACACCATACAGTATCATGTTTGGTCCTGATATCT 513
||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 356 TTGACCAGAAGAAATTTGGTGGAGACACCCCATACAGTATCATGTTTGGTCCCGATATCT 415
Query 514 GTGGCTACAGCACAAAGAAAGTGCATGCTATCCTTACCTATAATGAAGCCAACCACCTGA 573
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 416 GTGGCTACAGCACAAAGAAAGTGCATGCTATCCTTACCTACAATGAAGCCAACCACCTGA 475
Query 574 TCAAGAAAGATGTTCCATGTGAAACTGACCAGCTCACCCATGTGTACACATTTATCCTCC 633
||||||| |||||||||||||||||||| ||||| |||||||||||||| || |||||||
Sbjct 476 TCAAGAAGGATGTTCCATGTGAAACTGATCAGCTTACCCATGTGTACACCTTCATCCTCC 535
Query 634 GCCCAGATGCTACTTACAGCATTCTCATCGACAATGTTGAGAAACAAACTGGTAGCCTTT 693
|||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 536 GCCCAGATGCAACTTACAGCATTCTCATCGACAATGTTGAGAAGCAAACGGGTAGCCTTT 595
Query 694 ACTCTGACTGGGATCTTCTCCCACCCAAGAAGATCAAGGACCCCAGCGCCAAGAAGCCTG 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 596 ACTCTGACTGGGATCTTCTCCCACCCAAGAAGATCAAGGACCCCAGCGCCAAGAAGCCTG 655
Query 754 AGGACTGGGACGAACAAGAATACATTTCTGACCCTGAAGACAAGAAACCTGACGGTTACG 813
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 656 AGGATTGGGACGACCAAGAATACATTTCTGACCCTGAAGACAAGAAACCTGACGGATACG 715
Query 814 ATGATATCCCTAAGGAGATCCCAGACACCGACTCAAAGAAGCCTGAGGACTGGGATGATG 873
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 ATGATATCCCAAAGGAGATCCCAGACACCGACTCAAAGAAGCCTGAGGACTGGGATGATG 775
Query 874 AAGAAGATGGTGAGTGGACTGCCCCAACAATCCCCAACCCTGAGTACATGGGTGAATGGA 933
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 776 AAGAAGATGGTGAGTGGACTGCCCCGACCATCCCCAACCCTGAGTACATGGGTGAATGGA 835
Query 934 AGCCTAAGCAAATCAAGAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACA 993
||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||
Sbjct 836 AGCCTAAGCAAATCAAGAACCCCAACTACAAGGGCAAGTGGAAGGCACCAATGATTGACA 895
Query 994 ACCCTGACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTGGAC 1053
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 896 ACCCTGACTTCAAGGATGACCCAGAGCTCTATGTCTTCCCCAAGCTGAAGTATGTTGGAC 955
Query 1054 TCGAATTGTGGCAGGTGAAATCAGGATCATTGTTCGACAATGTCTTGATCTGCGATGACC 1113
|||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||
Sbjct 956 TCGAATTGTGGCAGGTGAAATCAGGATCGCTGTTTGATAATGTCTTGATCTGCGATGACC 1015
Query 1114 CAGACTATGCCAAGAAGTTGGCAGATGAAACATGGGGAAAGCTCAAGGATGCGGAGAAAG 1173
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1016 CAGACTACGCCAAGAAGTTGGCAGATGAAACATGGGGAAAGCTCAAGGATGCGGAAAAAG 1075
Query 1174 CAGCTTTCGATGAGGCTGAGAAGAAGAATGAGGAAGAGGAATCCAAGGACGCACCTGCGG 1233
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1076 CAGCTTTCGATGAGGCGGAGAAGAAGAATGAGGAAGAGGAATCCAAGGACGCACCTGCAG 1135
Query 1234 AATCTGATGCTGAAGACGAACCAGAGGATGATGAAGGAGGAGATGATTCCGATTCTGAAT 1293
| |||||||||||||| ||||||||||||||||| |||| | ||| || ||||||||||
Sbjct 1136 ATTCTGATGCTGAAGAGGAACCAGAGGATGATGATGGAG-A--TGAATCAGATTCTGAAT 1192
Query 1294 CTAAGGCCGAGGAGACCAAATCAGTAGATAGCGAGGAAACCT-CTGAGAAAGACGCCACC 1352
||||||| ||||||| |||||||| || |||||||||||| | ||||||||||||| |||
Sbjct 1193 CTAAGGCTGAGGAGAGCAAATCAGAAGTTAGCGAGGAAAC-TGCTGAGAAAGACGCTACC 1251
Query 1353 GCTCATG-ATG 1362
||||||| |||
Sbjct 1252 GCTCATGTATG 1262
Score = 244 bits (132), Expect = 1e-63
Identities = 186/210 (89%), Gaps = 11/210 (5%)
Strand=Plus/Plus
Query 1378 GTTGAAGATTTGAAGACCAAAGTTTTCAGTCTCTTTATTGTTTTATCGTTTTCTTTTGAA 1437
||| ||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||
Sbjct 1317 GTTCAAGATTTGAAGACCAAAGTTTTCAGAGTCTTTATTGTTTTATCCTTT-CTTTTGAA 1375
Query 1438 GTATTTTAGCATCTAGT--TT-GTCGGAGA--TAGAAACAAGTTTTAGCAAAACTAAAAG 1492
||||||||||||||||| || |||||||| ||||| ||||||||||||||| |||||
Sbjct 1376 GTATTTTAGCATCTAGTAGTTTGTCGGAGAGATAGAATCAAGTTTTAGCAAAATTAAAAT 1435
Query 1493 GGGGATACAATGTCTGTCAGATGCTCATTTTAGACTTTAAAAAACCATGAAGAAGTTTTG 1552
|||||||||||| ||||| ||||||| |||||||||| || | ||||||||||||||
Sbjct 1436 GGGGATACAATGACTGTCGGATGCTCCTTTTAGACTTGAA----C-ATGAAGAAGTTTTG 1490
Query 1553 CAGTTGCTTCTCTTTCTCTACTCTTGTTTC 1582
||||||| |||||||||||| |||||||||
Sbjct 1491 CAGTTGCATCTCTTTCTCTAGTCTTGTTTC 1520
> Ahg914924 jgi|Araly1|914924|Al_scaffold_0001_5178
Length=1257
Score = 1086 bits (588), Expect = 0.0
Identities = 911/1068 (85%), Gaps = 18/1068 (2%)
Strand=Plus/Plus
Query 164 AGTTATTTTCGAGGAGCGCTTTGATGATGGCTGGGAGAACAGATGGGTTAAATCTGAGTG 223
|||||| ||||||||||| || ||||| || |||||||| |||||||| ||||| || ||
Sbjct 69 AGTTATATTCGAGGAGCGATTCGATGACGGATGGGAGAAGAGATGGGTAAAATCCGACTG 128
Query 224 GAAGAAGGATGATAACACTGCTGGGGAGTGGAAGCACACTGCGGGAAATTGGTCTGGTGA 283
|||||| ||| | |||||||||||||| ||||| ||||| || |||||||||||||||||
Sbjct 129 GAAGAAAGATAACAACACTGCTGGGGAATGGAAACACACAGCTGGAAATTGGTCTGGTGA 188
Query 284 CGCTAACGATAAAGGTATCCAGACCAGTGAAGACTACAGATTCTACGCCATTTCAGCTGA 343
||||||||||||||||||||| || || |||||| ||||||||||||| || ||| ||||
Sbjct 189 CGCTAACGATAAAGGTATCCAAACAAGCGAAGACAACAGATTCTACGCTATATCATCTGA 248
Query 344 GTTCCCTGAATTCAGTAACAAGGACAAGACCTTAGTCTTCCAATTCTCAGTCAAGCACGA 403
|||||||| ||||| ||||||||||||||| |||||||||||||||| |||||||| ||
Sbjct 249 ATTCCCTGAGTTCAGCAACAAGGACAAGACCCTAGTCTTCCAATTCTCTGTCAAGCATGA 308
Query 404 GCAAAAGCTTGACTGCGGTGGTGGCTACATGAAGCTACTAAGTGGTGATGTTGACCAAAA 463
|| ||||||||||| |||||||| ||||||||| | || ||||||||||||||||| ||
Sbjct 309 ACAGAAGCTTGACTGTGGTGGTGGTTACATGAAGTTGCTTAGTGGTGATGTTGACCAGAA 368
Query 464 GAAATTT-GGTGGAGACACACCATACAGTATCATGTTTGGTCCTGATATCTGTGGCT-AC 521
|||||| || |||||||| || |||||||| |||||||| ||||||| ||||| | ||
Sbjct 369 -AAATTTCGGAGGAGACACTCCTTACAGTATTATGTTTGGCCCTGATAAATGTGG-TGAC 426
Query 522 AGCACAAAGAAAGTGCATGCTATCCTTACCTATAATG-AAGCCAACCACCTGATCAAGAA 580
| ||| |||||||| |||||||| ||||| || |||| || | ||||| ||||||||||
Sbjct 427 AACACTAAGAAAGTACATGCTATTCTTACATACAATGGAA-CAAACCATTTGATCAAGAA 485
Query 581 AGATGTTCCATGTGAAACTGACCAGCTCACCCATGTGTACACATTTATCCTCCGCCCAGA 640
|| || |||||||| ||||||||||| || ||||||||||| || ||||||| |||||
Sbjct 486 GGAGGTCCCATGTGAGACTGACCAGCTTACTCATGTGTACACCTTCGTCCTCCGTCCAGA 545
Query 641 TGCTACTTACAGCATTCTCATCGACAATGTTGAGAAACAAACTGGTAGCCTTTACTCTGA 700
||||||||| || ||| | || |||||||||||||| |||||||||||||| | ||||||
Sbjct 546 TGCTACTTATAGTATTTTGATTGACAATGTTGAGAAGCAAACTGGTAGCCTCTCCTCTGA 605
Query 701 CTGGGATCTTCTCCCACCCAAGAAGATCAAGGACCCCAGCGCCAAGAAGCCTGAGGACTG 760
||||||||| |||||| | |||||||| ||||| || || ||||||||||||||||||||
Sbjct 606 CTGGGATCTCCTCCCAGCAAAGAAGATTAAGGATCCAAGTGCCAAGAAGCCTGAGGACTG 665
Query 761 GGACGAACAAGAA-TACATTTCTGACCCTGAAGACAAGAAACCTGACGGT-TACGATGAT 818
||| || ||| || |||||| |||| || ||||||| || || | ||| ||||||||
Sbjct 666 GGATGA-CAAAAAGTACATTCCTGATCCGGAAGACACTAAGCCAG-CGGGATACGATGAC 723
Query 819 ATCCCTAAGGAGATCCCAGACACCGACT-CAAAGAAGCCTGAGGACTGGGATGATGAAGA 877
|||||||||||||| |||||||| || | ||||||||||||| || |||||||||||| |
Sbjct 724 ATCCCTAAGGAGATTCCAGACACTGA-TGCAAAGAAGCCTGAAGATTGGGATGATGAAAA 782
Query 878 AGATGGTGAGTGGACTGCCCCAACAATCCCCAACCCTGAGTACATGGGTGAATGGAAGCC 937
| ||||||||||||| ||||||| || || || || ||||||| ||||| |||||||||
Sbjct 783 ATCTGGTGAGTGGACTACCCCAACCATTCCTAATCCGGAGTACAAGGGTGTATGGAAGCC 842
Query 938 TAAGCAAATCAAGAACCCCAACTACAAGGGCAAGTGGGAGGCTCCATTGATTGACAACCC 997
||| ||||||||||||| || ||||||||||||||| |||||||| |||| ||||||||
Sbjct 843 CAAGAAAATCAAGAACCCTAATTACAAGGGCAAGTGGAAGGCTCCAATGATCGACAACCC 902
Query 998 TGACTTCAAGGATGACCCAGAGCTCTACGTCTTCCCCAAGCTGAAATATGTTGGACTCGA 1057
||| ||||||||||||||||| || || ||||||||||| ||||||||||||| | ||
Sbjct 903 TGATTTCAAGGATGACCCAGAACTATATGTCTTCCCCAAATTGAAATATGTTGGGGTGGA 962
Query 1058 ATTGTGGCAGGTGAAATCAGGATCATTGTTCGACAATGTCTTGATCTGCGATGACCCAGA 1117
||||||||||||||||| ||||| |||||||||||||| ||| | |||||||||||||
Sbjct 963 GTTGTGGCAGGTGAAATCTGGATCCTTGTTCGACAATGTATTGGTAAGCGATGACCCAGA 1022
Query 1118 CTATGCCAAGAAGTTGGCAGATGAAACATGGGGAAAGCTCAAGGATGCGGAGAAAGCAGC 1177
|| || ||||||||||| || ||||||||||||||| ||||||||||||| |||||||
Sbjct 1023 GTACGCTAAGAAGTTGGCCGAAGAAACATGGGGAAAGAACAAGGATGCGGAGGAAGCAGC 1082
Query 1178 -TTTCGATGAGGCTGAGAAGAAGAATGA--GGAAGAGGAATCCAAGGA 1222
||| || || || |||||||| || || |||||||||||| |||||
Sbjct 1083 ATTT-GAAGAAGCAGAGAAGAA-AA-GACAGGAAGAGGAATCAAAGGA 1127
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65477131155
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5