BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G10095.1
Length=1507
Score E
Sequences producing significant alignments: (Bits) Value
Ahg312053 jgi|Araly1|312053|fgenesh1_pm.C_scaffold_1000833 1812 0.0
Ahg913140 jgi|Araly1|913140|Al_scaffold_0001_3394 1790 0.0
Ahg473495 jgi|Araly1|473495|fgenesh2_kg.1__3449__AT1G10095.1 1786 0.0
Ahg334284 jgi|Araly1|334284|fgenesh1_pg.C_scaffold_1000849 739 0.0
> Ahg312053 jgi|Araly1|312053|fgenesh1_pm.C_scaffold_1000833
Length=1275
Score = 1812 bits (981), Expect = 0.0
Identities = 1183/1279 (92%), Gaps = 20/1279 (2%)
Strand=Plus/Plus
Query 91 ATGAAACAAGGACCATCTTCTGAAGATGATTGCTTTAGCTTGTTGAAGCAGTTCGAGCAT 150
|||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1 ATGAGACAAGGACCATGTTCTGAAGAAGATTGCTTTAGCTTGTTGAAGCAGTTCGAGCAT 60
Query 151 GTCCTTGAATCTGACCCTCTTATTGATGAAGTAGGGTTTATTCACCCCTCACAGTTC-AC 209
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 61 GTTCTTGAAGCTGACCCTCTTATTGATGAAGTAGGGTTTATTCACCCCTCACAGTTCAAC 120
Query 210 CATGCTCGATAAAGAAGCAGGTTTCTCCAA--TG------AAT----TCCAGCCTAACAA 257
| |||| ||| |||||||||||| | |||| || ||| |||||||||||||
Sbjct 121 C-TGCTGGATGAAGAAGCAGGTTCCGCCAATGTGTATCAAAATGAACTCCAGCCTAACAA 179
Query 258 TGGAACCTCAAGCAAGTTCTGGAATCAAGATCACAAATTGGGAATATCAACTGATATACT 317
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 180 TGGAACCTCAAGAAAATTCTGGAATCAAGATCACAAATTGGGAATATCAACTGATATTCT 239
Query 318 TGTTCAATTATGTAAAGATGCCAAACATGTGTTTCTGCTAGCGCTTCAGGAGTACAAATC 377
||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| |
Sbjct 240 TGTTCAATTATGTAAAGATGCCAAACATGTGTTTCTGCTTGCGTTTGAGGAGTACAAA-C 298
Query 378 -CCATGGAAACGCATGTGATGAGTCTCAGATTAAGAATATCTCTTGTTCTCCCTGTATTC 436
|||||||||||| ||| |||||||||| ||| ||||| |||||||||| ||| ||| ||
Sbjct 299 GCCATGGAAACGCTTGTAATGAGTCTCAAATTGAGAATTTCTCTTGTTCCCCCGGTACTC 358
Query 437 CCGAGAGTGACGTCATGAAGCATAGCCAATCTGTTTTGCTGTTGAGCTCAGACTTTGGAA 496
|||||||||| || ||||||||||||||| ||||||||||| | || |||||||||||||
Sbjct 359 CCGAGAGTGAAGTTATGAAGCATAGCCAAGCTGTTTTGCTGATAAGTTCAGACTTTGGAA 418
Query 497 CTGCATGGAATGCTAGGAAGTTGATTTTGTCAAAAAAGGATCACCTTTCGGCATTCACAG 556
||||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |
Sbjct 419 CTGCATGGAATGCTAGGAAGTTGATATTATCAAAAAAGGATCAACTTTCGGCATTCACGG 478
Query 557 AAGAACTTCGTCTTTCTGGGCTCATTCTTTCAAATTCCCCA-AAGAGTGAGTCAACATGG 615
|||| |||||||| |||||||||||||||||||||| | || ||||||||||||||||||
Sbjct 479 AAGATCTTCGTCTCTCTGGGCTCATTCTTTCAAATT-CTCATAAGAGTGAGTCAACATGG 537
Query 616 AGCCATAGAAGGTGGATAATTAAGATGATTTCCCAGAGTTTTTCTACACTACAAGAGATT 675
|||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||
Sbjct 538 AGCCATAGAAGGTGGATAATTAAGATGATTTCTCAGAGATTTTCTACACCACAAGAGATT 597
Query 676 ATAACCAAAGAATCTGAGTTAGTGGAATCAATAGGCGAGAGATCAAAGATGAACTATCGT 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 ATAACCAAAGAATCTGAGTTAGTGGAATCAATAGGCGAGAGATCAAAGATGAACTATCGT 657
Query 736 GCATGGTATCACCGTTGCTGGTTGGTTTCTTACATGACAATTGAGCAGGTGATACAAGAG 795
||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 658 GCATGGTATCACCGTTGCTGGTTGGTTTCCTACATGGCAATTGAGCAGGTGATACAAGAG 717
Query 796 TTGAACAAATCTAAAAGATGGGCTGGGCTTCATGTAGCCGATAGTTCTTGCTTCCATTAT 855
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 718 TTGAACAAATCTAAAAGGTGGGCCAGGCTTCATGTAGCCGATAGTTCTTGCTTCCATTAT 777
Query 856 CGCAGACGGCTGATGCTCAAGATTCTGGAGTCACTTTATGTGAAAGGAAGCAGCGCTTAT 915
|| ||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||
Sbjct 778 CGTAGACGGCTGATGCTCAAGATTTTGGAGTCACTTTATGTGAAAGGAGGCAATGCTTAT 837
Query 916 GATAAAACTGAGGCACGCAAAATCTGGAAGGAAGAGCTGGATTGGAATGAAGAATTGGTA 975
|||||| | |||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 838 GATAAATCCGAGGCACGTAAAATCTGGAAGGAAGAGCTGGATTGGAACAAAGAATTGGTA 897
Query 976 GAACGTTACGTGGGACGAGAGGCACTATGGCTTCACCGGCGGTTCCTCTCTCTTAATTGG 1035
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 898 GAACGTTACGTGGGACGAGAGGCCCTATGGCTTCACCGGCGGTTCCTGTCTCTTAATTGG 957
Query 1036 ATAATGTATTTCGCTTGCAATCATTCAGATGCTTCACCTGAAACCGGAGAGAGTATTATT 1095
||||||||||||||||||||| ||||||||| |||||||||| |||||||||||| |||
Sbjct 958 ATAATGTATTTCGCTTGCAATGATTCAGATGTTTCACCTGAACCCGGAGAGAGTACCATT 1017
Query 1096 ATGAATGAAGAAATTGCCATCTTCATTGATAATGAGATCCGTCTTCTAGA-TTCTTCTAT 1154
||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||
Sbjct 1018 ATGAATGAAGAAATTGCCATCTTCATTGATAATGAGATCCGTCTTGTAGAATT-TTCTAT 1076
Query 1155 GACCGTTCCGGATACCAAATTTGAAGATTTTCAAGCTCAAGCATTGCATGCTGCTGTCTA 1214
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 GACTGTTCCGGATACCAAATTTGAAGATTTTCAAGCTCAAGCATTGCATGCTGCTGTCTA 1136
Query 1215 CACGCTATGGCTGACAAAGAGCATTCCAGTACTGTGGAGAATGCTCGAGGAGAAGCTTGG 1274
|| ||||||||||||||||| || |||| | ||||||||||| | ||||||||||||||
Sbjct 1137 CATGCTATGGCTGACAAAGAAAATGCCAGAATTGTGGAGAATGGTTGAGGAGAAGCTTGG 1196
Query 1275 AACAGAGAAAGTGAAGTGTGTACTGAACACAATTGCTCAAGAGAGACCCTCGCTTCTGCA 1334
|||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||
Sbjct 1197 AACAGAGAAAGTGAAGTGTGTAATGAGCACAATTGCTCAAGAGAGACCCTCACTTTTGCA 1256
Query 1335 TCATTTGGTGAATGTCTGA 1353
||||||||||||||| |||
Sbjct 1257 TCATTTGGTGAATGTTTGA 1275
> Ahg913140 jgi|Araly1|913140|Al_scaffold_0001_3394
Length=1275
Score = 1790 bits (969), Expect = 0.0
Identities = 1176/1276 (92%), Gaps = 14/1276 (1%)
Strand=Plus/Plus
Query 91 ATGAAACAAGGACCATCTTCTGAAGATGATTGCTTTAGCTTGTTGAAGCAGTTCGAGCAT 150
|||| ||||||| ||| ||||||||| | |||||||| ||||||||||| ||||||||||
Sbjct 1 ATGAGACAAGGATCATGTTCTGAAGAAGGTTGCTTTACCTTGTTGAAGCTGTTCGAGCAT 60
Query 151 GTCCTTGAATCTGACCCTCTTATTGATGAAGTAGGGTTTATTCACCCCTCACAGTTCACC 210
|| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
Sbjct 61 GTTCTTGAATCTGACCCTCTTATTGATGAAGTAGGTTTTATTCACCCCTCACAATTCAAC 120
Query 211 ATGCTCGATAAAGAAGCAGG-T--TTC----TC---C--AATGAATTCCAGCCTAACAAT 258
||||| ||| |||||||||| | ||| || | |||||| |||||||||||||
Sbjct 121 ATGCTGGATGAAGAAGCAGGTTCCTTCAGTGTCTATCAAAATGAACACCAGCCTAACAAT 180
Query 259 GGAACCTCAAGCAAGTTCTGGAATCAAGATCACAAATTGGGAATATCAACTGATATACTT 318
| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GAAACCTCAAGAAAATTCTGGAATCAAGATCACAAATTGGGAATATCAACTGATATACTT 240
Query 319 GTTCAATTATGTAAAGATGCCAAACATGTGTTTCTGCTAGCGCTTCAGGAGTACAAATC- 377
|||||||||||||||||||||||||||||||||||||| ||| || ||||||||||| |
Sbjct 241 GTTCAATTATGTAAAGATGCCAAACATGTGTTTCTGCTTGCGTTTGAGGAGTACAAA-CG 299
Query 378 CCATGGAAACGCATGTGATGAGTCTCAGATTAAGAATATCTCTTGTTCTCCCTGTATTCC 437
|||||||||||| ||| |||||||||| ||| ||||| |||||||||| ||| ||| |||
Sbjct 300 CCATGGAAACGCTTGTAATGAGTCTCAAATTGAGAATTTCTCTTGTTCCCCCGGTACTCC 359
Query 438 CGAGAGTGACGTCATGAAGCATAGCCAATCTGTTTTGCTGTTGAGCTCAGACTTTGGAAC 497
||||| ||| || |||| |||||||||| ||||||||||||| || ||||||||||||||
Sbjct 360 CGAGATTGAAGTTATGAGGCATAGCCAAGCTGTTTTGCTGTTAAGTTCAGACTTTGGAAC 419
Query 498 TGCATGGAATGCTAGGAAGTTGATTTTGTCAAAAAAGGATCACCTTTCGGCATTCACAGA 557
||||||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||
Sbjct 420 TGCATGGAATGCTAGAAAGTTGATATTATCAAAAAAGGATCAACTTTCGGCATTCACGGA 479
Query 558 AGAACTTCGTCTTTCTGGGCTCATTCTTTCAAATTCCCCAAAGAGTGAGTCAACATGGAG 617
|||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 480 AGAACTTCGTCTCTCTGGGCTCATTCTTTCAAATTCTCCTAAGAGTGAGTCAACATGGAG 539
Query 618 CCATAGAAGGTGGATAATTAAGATGATTTCCCAGAGTTTTTCTACACTACAAGAGATTAT 677
|||||||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||||
Sbjct 540 CCATAGAAGGTGGATAATTAAGATGATTTCTCAGAGATTTTCTACACCACAAGTGATTAT 599
Query 678 AACCAAAGAATCTGAGTTAGTGGAATCAATAGGCGAGAGATCAAAGATGAACTATCGTGC 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 AACCAAAGAATCTGAGTTAGTGGAATCAATAGGCGAGAGATCAAAGATGAACTATCGTGC 659
Query 738 ATGGTATCACCGTTGCTGGTTGGTTTCTTACATGACAATTGAGCAGGTGATACAAGAGTT 797
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 660 ATGGTATCACCGTTGCTGGTTGGTTTCCTACATGGCAATTGAGCAGGTGATACAAGAGTT 719
Query 798 GAACAAATCTAAAAGATGGGCTGGGCTTCATGTAGCCGATAGTTCTTGCTTCCATTATCG 857
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 720 GAACAAATCTAAAAGGTGGGCCGGGCTTCATGTAGCCGATAGTTCTTGCTTCCATTATCG 779
Query 858 CAGACGGCTGATGCTCAAGATTCTGGAGTCACTTTATGTGAAAGGAAGCAGCGCTTATGA 917
|||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||||
Sbjct 780 TAGACGGTTGATGCTCAAGATTTTGGAGTCACTTTATGTGAAAGGAGGCAATGCTTATGA 839
Query 918 TAAAACTGAGGCACGCAAAATCTGGAAGGAAGAGCTGGATTGGAATGAAGAATTGGTAGA 977
|||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 840 TAAATCTGAGGCACGTAAAATCTGGAAGGAAGAGCTGGATTGGAACAAAGAATTGGTAGA 899
Query 978 ACGTTACGTGGGACGAGAGGCACTATGGCTTCACCGGCGGTTCCTCTCTCTTAATTGGAT 1037
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 900 ACGTTACGTGGGACGAGAGGCCCTATGGCTTCACCGGCGGTTCCTCTCTCTTAATTGGAT 959
Query 1038 AATGTATTTCGCTTGCAATCATTCAGATGCTTCACCTGAAACCGGAGAGAGTATTATTAT 1097
||| ||||||||||||||| ||||||||| |||||||||| ||||||||||||| |||||
Sbjct 960 AATATATTTCGCTTGCAATGATTCAGATGTTTCACCTGAACCCGGAGAGAGTATCATTAT 1019
Query 1098 GAATGAAGAAATTGCCATCTTCATTGATAATGAGATCCGTCTTCTAGATTCTTCTATGAC 1157
|||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||
Sbjct 1020 GAATGAAGAAATTGCCATCTTCATTGATAACGAGATCCATCTTCTAGAATCTTCTATGAT 1079
Query 1158 CGTTCCGGATACCAAATTTGAAGATTTTCAAGCTCAAGCATTGCATGCTGCTGTCTACAC 1217
||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 1080 CGTTCCGGATACCAAATTTGAAGATTTCCAAGCTCAAGCATTGCATGCTGGTGTCTACAT 1139
Query 1218 GCTATGGCTGACAAAGAGCATTCCAGTACTGTGGAGAATGCTCGAGGAGAAGCTTGGAAC 1277
||||||||| ||||||| || |||| | ||||||||||| | |||||||||||||||||
Sbjct 1140 GCTATGGCTAACAAAGAAAATGCCAGAATTGTGGAGAATGGTTGAGGAGAAGCTTGGAAC 1199
Query 1278 AGAGAAAGTGAAGTGTGTACTGAACACAATTGCTCAAGAGAGACCCTCGCTTCTGCATCA 1337
||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||
Sbjct 1200 AGAGAAAGTGAAGTGTGTACTGAGCACAATTGCTCAAGAGAGACCCTCACTTTTGCATCA 1259
Query 1338 TTTGGTGAATGTCTGA 1353
||||||||||||||||
Sbjct 1260 TTTGGTGAATGTCTGA 1275
> Ahg473495 jgi|Araly1|473495|fgenesh2_kg.1__3449__AT1G10095.1
Length=1366
Score = 1786 bits (967), Expect = 0.0
Identities = 1243/1374 (90%), Gaps = 28/1374 (2%)
Strand=Plus/Plus
Query 90 AATGAAACAAGGACCATCTTCTGAAGATGATTGCTTTAGCTTGTTGAAGCAGTTCGAGCA 149
||||| ||||||||||| ||||||||| | |||||||| | ||||||||| |||||||||
Sbjct 1 AATGAGACAAGGACCATGTTCTGAAGAAGGTTGCTTTACCGTGTTGAAGCTGTTCGAGCA 60
Query 150 TGTCCTTGAATCTGACCCTCTTATTGATGAAGTAGGGTTTATTCACCCCTCACAGTTC-A 208
||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |
Sbjct 61 TGTTCTTGAATCTGACCCTCTTATTAATGAAGTAGGTTTTATTCACCCCTCACAGTTCAA 120
Query 209 CCATGCTCGATAAAGAAGCAGG-T--TTC----TC---C--AATGAATTCCAGCCTAACA 256
|| |||| ||| |||||||||| | ||| || | |||||| ||||||||||||
Sbjct 121 CC-TGCTGGATGAAGAAGCAGGTTCCTTCAGTGTCTATCAAAATGAACTCCAGCCTAACA 179
Query 257 ATGGAACCTCAAGCAAGTTCTGGAATCAAGATCACAAATTGGGAATATCAACTGATATAC 316
||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 ATGAAACCTCAAGAAAATTCTGGAATCAAGATCACAAATTGGGAATATCAACTGATATAC 239
Query 317 TTGTTCAATTATGTAAAGATGCCAAACATGTGTTTCTGCTAGCGCTTCAGGAGTACAAAT 376
|||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||
Sbjct 240 TTGTTCAATTATGTAAAGATGCCAAACATGTGTTTCTGCTTGCGTTTGAGGAGTACAAA- 298
Query 377 C-CCATGGAAACGCATGTGATGAGTCTCAGATTAAGAATATCTCTTGTTCTCCCTGTATT 435
| ||||||||||| ||| |||| ||||| ||| ||||| |||||||||| ||| ||| |
Sbjct 299 CGTCATGGAAACGCTTGTAATGAATCTCAAATTGAGAATTTCTCTTGTTCCCCCGGTACT 358
Query 436 CCCGAGAGTGACGTCATGAAGCATAGCCAATCTGTTTTGCTGTTGAGCTCAGACTTTGGA 495
|| |||| ||| || |||| |||||||||| ||||||||||||| || ||||||||||||
Sbjct 359 CCTGAGATTGAAGTTATGAGGCATAGCCAAGCTGTTTTGCTGTTAAGTTCAGACTTTGGA 418
Query 496 ACTGCATGGAATGCTAGGAAGTTGATTTTGTCAAAAAAGGATCACCTTTCGGCATTCACA 555
||||||||||||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct 419 ACTGCATGGAATGCTAGAAAGTTGATATTATCAAAAAAGGATCAACTTTCGGCATTCAC- 477
Query 556 G-AAGAACTTCGTCTTTCTGGGCTCATTCTTTCAAATTCCCCAAAGAGTGAGTCAACATG 614
| ||||||||||||| |||| |||||||||||||||||| || |||||||||||||||||
Sbjct 478 GAAAGAACTTCGTCTCTCTGAGCTCATTCTTTCAAATTCTCCTAAGAGTGAGTCAACATG 537
Query 615 GAGCCATAGAAGGTGGATAATTAAGATGATTTCCCAGAGTTTTTCTACACTACAAGAGAT 674
||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||| |||
Sbjct 538 GAGCCATAGAAGGTGGATAATTAAGATGATTTCTCAGAGATTTTCTACACCACAAGTGAT 597
Query 675 TATAACCAAAGAATCTGAGTTAGTGGAATCAATAGGCGAGAGATCAAAGATGAACTATCG 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 TATAACCAAAGAATCTGAGTTAGTGGAATCAATAGGCGAGAGATCAAAGATGAACTATCG 657
Query 735 TGCATGGTATCACCGTTGCTGGTTGGTTTCTTACATGACAATTGAGCAGGTGATACAAGA 794
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 658 TGCATGGTATCACCGTTGCTGGTTGGTTTCCTACATGGCAATTGAGCAGGTGATACAAGA 717
Query 795 GTTGAACAAATCTAAAAGATGGGCTGGGCTTCATGTAGCCGATAGTTCTTGCTTCCATTA 854
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 718 GTTGAACAAATCTAAAAGGTGGGCCGGGCTTCATGTAGCCGATAGTTCTTGCTTCCATTA 777
Query 855 TCGCAGACGGCTGATGCTCAAGATTCTGGAGTCACTTTATGTGAAAGGAAGCAGCGCTTA 914
||| |||||| |||||||||||||| ||||||||||||||||||||||| ||| |||||
Sbjct 778 TCGTAGACGGTTGATGCTCAAGATTTTGGAGTCACTTTATGTGAAAGGAGGCAATGCTTA 837
Query 915 TGATAAAACTGAGGCACGCAAAATCTGGAAGGAAGAGCTGGATTGGAATGAAGAATTGGT 974
||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 838 TGATAAATCTGAGGCACGTAAAATCTGGAAGGAAGAGCTGGATTGGAACAAAGAATTGGT 897
Query 975 AGAACGTTACGTGGGACGAGAGGCACTATGGCTTCACCGGCGGTTCCTCTCTCTTAATTG 1034
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 898 AGAACGTTACGTGGGACGAGAGGCCCTATGGCTTCACCGGCGGTTCCTCTCTCTTAATTG 957
Query 1035 GATAATGTATTTCGCTTGCAATCATTCAGATGCTTCACCTGAAACCGGAGAGAGTATTAT 1094
|||||| ||||||||||||||| ||| ||||| |||||||||| ||||||||||||| ||
Sbjct 958 GATAATATATTTCGCTTGCAATGATTTAGATGTTTCACCTGAACCCGGAGAGAGTATCAT 1017
Query 1095 TATGAATGAAGAAATTGCCATCTTCATTGATAATGAGATCCGTCTTCTAGATTCTTCTAT 1154
||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||
Sbjct 1018 TATGAATGAAGAAATTGCCATCTTCATTGATAACGAGATCCATCTTCTAGAATCTTCTAT 1077
Query 1155 GACCGTTCCGGATACCAAATTTGAAGATTTTCAAGCTCAAGCATTGCATGCTGCTGTCTA 1214
|| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 1078 GATCGTTCCGGATACCAAATTTGAAGATTTCCAAGCTCAAGCATTGCATGCTGGTGTCTA 1137
Query 1215 CACGCTATGGCTGACAAAGAGCATTCCAGTACTGTGGAGAATGCTCGAGGAGAAGCTTGG 1274
|| ||||||||||||||||| || |||| | ||||||||||| | ||||||||||||||
Sbjct 1138 CATGCTATGGCTGACAAAGAAAATACCAGAATTGTGGAGAATGGTTGAGGAGAAGCTTGG 1197
Query 1275 AACAGAGAAAGTGAAGTGTGTACTGAACACAATTGCTCAAGAGAGACCCTCGCTTCTGCA 1334
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||
Sbjct 1198 AACAGAGAAAGTGAAGTGTGTACTGAGCACAATTGCTCAAGAGAGACCCTCACTTTTGCA 1257
Query 1335 TCATTTGGTGAATGTCTGAAGACCCTCCATAA-ATTGGTGTCAAACCA-TGTCTCAGGAT 1392
|||||||||||||||||||||| || | | ||| | || | || | | | || |
Sbjct 1258 TCATTTGGTGAATGTCTGAAGATTCTTT-TGAGATT--TCTCTTATCACT-TGTG-GGTT 1312
Query 1393 CTGTTT-GAATTG--tttttttttttttttttttttttttttttttCTATTTTC 1443
| | || || ||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 1313 CGGATTCGATTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGTTTTC 1366
> Ahg334284 jgi|Araly1|334284|fgenesh1_pg.C_scaffold_1000849
Length=960
Score = 739 bits (400), Expect = 0.0
Identities = 567/639 (89%), Gaps = 45/639 (7%)
Strand=Plus/Plus
Query 91 ATGAAACAAGGACCATCTTCTGAAGATGATTGCTTTAGCTTGTTGAAGCAGTTCGAGCAT 150
|||| ||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 1 ATGAGACAAGGACCATGTTCTGAAGAAGATTGCTTTATCTTGTTGAAGCAGTTCGAGCAT 60
Query 151 GTCCTTGAATCTGACCCTCTTATTGATGAAGTAGGGTTTATTCACCCCTCACAGTTCA-C 209
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 61 GTTCTTGAATCTGACCCTCTTATTGATGAAGTAGGGTTTATTCACCCCTCACAGTTCAAC 120
Query 210 CATGCTCGATAAAGAAGCAGGTTTCTCCAATG---A--A---T----TCCAGCCTAACAA 257
| |||| ||| ||||||||||||||||||||| | | | |||||||||||||
Sbjct 121 C-TGCTGGATGAAGAAGCAGGTTTCTCCAATGTGTATCAAAATGAACTCCAGCCTAACAA 179
Query 258 TGGAACCTCAAGCAAGTTCTGGAATCAAGATCACAAATTGGGAATATCAACTGATATACT 317
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 180 TGGAACCTCAAGAAAGTTCTGGAATCAAGATCACAAATTGGGAATATCAACTGATATTCT 239
Query 318 TGTTCAATTATGTAAAGATGCCAAACATGTGTTTCTGCTAGCGCTTCAGGAGTACAAATC 377
|||||||||||||||| |||||||||||| ||||||||| |||||| | ||||||||| |
Sbjct 240 TGTTCAATTATGTAAATATGCCAAACATGCGTTTCTGCTTGCGCTTGATGAGTACAAA-C 298
Query 378 -CCATGGAAACGCATGTGATGAGTCTCAGATTAAGAATATCTCTTGTTCTCCCTGTATTC 436
||||||||| | || ||| || | | || | | || ||| ||
Sbjct 299 GCCATGGAAA----T---AT----CTC---TT--G--T-TC-C-----C-CCA-GTACTC 331
Query 437 CCGAGAGTGACGTCATGAAGCATAGCCAATCTGTTTTGCTGTTGAGCTCAGACTTTGGAA 496
|||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 332 CCGAGAGTGAAGTCATGAAGCATAGCCAAGCTGTTTTGCTGTTAAGCTCAGACTTTGGAA 391
Query 497 CTGCATGGAATGCTAGGAAGTTGATTTTGTCAAAAAAGGATCACCTTTCGGCATTCACAG 556
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 392 CTGCATGGAATGCTAGGAAGTTGATTTTGTCAAAAAAGGATCAACTTTCGGCATTCAC-G 450
Query 557 -AAGAACTTCGTCTTTCTGGGCTCATTCTTTCAAATTCCCCAAAGAGTGAGTCAACATGG 615
||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 451 CAAGAACTTCGTCTTTCTGGGCTCATTCTTTCAAATTCTCCTAAGAGTGAGTCAACATGG 510
Query 616 AGCCATAGAAGGTGGATAATTAAGATGATTTCCCAGAGTTTTTCTACACTACAAGAGATT 675
|||||||||||||||||||||||||||||||||| | | ||| |||||||||||| ||||
Sbjct 511 AGCCATAGAAGGTGGATAATTAAGATGATTTCCCTGGGATTTCCTACACTACAAGTGATT 570
Query 676 ATAACCAAAGAATCTGAGTTAGTGGAATCAATAGGCGAG 714
|||||||||||||||||||||||||||||||||||||||
Sbjct 571 ATAACCAAAGAATCTGAGTTAGTGGAATCAATAGGCGAG 609
Score = 494 bits (267), Expect = 1e-138
Identities = 330/360 (92%), Gaps = 6/360 (2%)
Strand=Plus/Plus
Query 994 GAGGCACTATGGCTTCACCGGCGGTTCCTCTCTCTTAATTGGATAATGTATTTCGCTTGC 1053
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 607 GAGGCCCTATGGCTTCACCGGCGGTTCCTCTCTCTTAATTGGATAATGTATTTCACTTGC 666
Query 1054 AATCATTCAGATGCTTCACCTGAAACCGGAGAGAGTATTATTATGAATGAAGAAATTGCC 1113
||| ||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 667 AATGATTCAGATGTTTCACCTGAACCCGGAGAGAGTATCATTATGAATGAAGAAATTGCC 726
Query 1114 ATCTTCATTGATAATGAGATCCGTCTTCTAGATTCTTCTATGACCGTTCCGGATACCAAA 1173
||||||||| |||||||||||||||| ||||| ||| ||||||| |||||||||||||||
Sbjct 727 ATCTTCATTAATAATGAGATCCGTCTCCTAGAATCTGCTATGACTGTTCCGGATACCAAA 786
Query 1174 TTTGAAGATTTTCAAGCTCAAGCATTGCATGCTGCTGTCTACACGCTATGGCTGACAAAG 1233
||||||||||| |||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct 787 TTTGAAGATTTCCAAGCTCAAGCATTGCATACTGGTGTCTACATGCTATGGCTGACAAAG 846
Query 1234 AGCATTCCAGTACTGTGGAGAATGCTCGAGGAGAAGCTTGGAACAGAGAAAGTGAAGTGT 1293
| || |||| | ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 847 AAAATGCCAGAATTGTGGAGAATGCTTGAGGAGAAGCTTGGAACAGAGAAAGTGAAGTGT 906
Query 1294 GTACTGAACACAATTGCTCAAGAGAGACCCTCGCTTCTGCATCATTTGGTGAATGTCTGA 1353
||| ||| |||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 907 GTAATGAGCACAATTGCTCAAGAGAGACCCTCAC------ATCATTTGGTGAATGTCTGA 960
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56411652845
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5