BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G10870.1
Length=2769
Score E
Sequences producing significant alignments: (Bits) Value
Ahg919893 jgi|Araly1|919893|scaffold_101174.1 3814 0.0
Ahg475245 jgi|Araly1|475245|fgenesh2_kg.2__375__AT1G60860.1 2032 0.0
> Ahg919893 jgi|Araly1|919893|scaffold_101174.1
Length=2366
Score = 3814 bits (2065), Expect = 0.0
Identities = 2268/2367 (96%), Gaps = 10/2367 (0%)
Strand=Plus/Plus
Query 124 GTTTCTTCCTTTTTGTTTAACCAATGGCGACCTTTATCAATCTGGAGGATTCCCCAATGT 183
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTTTCTTCCTTTTTGTTTCACCAATGGCGACCTTTATCAATCTGGAGGATTCCCCAATGT 60
Query 184 TTCAGAAACAGGTTTGTTCCTTGGAGGGGACAGCTGACGAGCTTAAAGATCGTTGTCAGA 243
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 61 TTCAGAAACAGGTTTGTTCCTTGGAGGGGACAGCTGATGAGCTTAAAGATCGTTGTCAGA 120
Query 244 AGCTATACAAAGGTGTTAAGAAGTTTATGGGGACTTTGGGAGAGGCATCTAAAGGAGAAA 303
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 121 AGCTATACAAAGGTGTTAAGAAGTTTATGGGGACTTTGGGAGAGGCATCCAAAGGAGAAA 180
Query 304 GTGCTTTTGCAGCTTGTCTGGAAGAATTTGGGGGTGGACCTGATGATCCTATCAGTCTTT 363
|||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 181 GTGCCTTTGCAGATTGTCTGGAAGAATTTGGAGGTGCACCTGATGATCCTATCAGTCTTT 240
Query 364 CAATTGGAGGGCCCGTTATATCCAAATTCATAAATGCACTTCGAGAGCTTGCCTCTTATA 423
|||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 241 CAATTGGAGGCCCCGTTATATCCAAATTTATAAATTCACTTCGAGAGCTTGCCTCTTATA 300
Query 424 AGGAGTTTCTTTGCTCACAGGTGGAGCATGTGCTACTTGAGAGGTTGATGAACTTTATTA 483
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 301 AGGAGTTTCTTTGCTCACAGGTGGAGCATGTGTTACTCGAGAGGTTGATGAACTTTATTA 360
Query 484 GTGTTGATCTACAAGAAGCTAAGGAGTCTCGCCATCGATTTGATAAAGCTGCTCATTCGT 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 ATGTTGATCTACAAGAAGCTAAGGAGTCTCGCCATCGATTTGATAAAGCTGCTCATTCGT 420
Query 544 ATGATCAGTCGCGCGAAAAGTTTGTGTCTTTAAAGAAGAATACAAGAGGAGAAATTGTGG 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 421 ATGATCAGTCGCGCGAAAAGTTTGTGTCTTTAAAGAAGAATACAAGAGGAGAAATTGTTG 480
Query 604 CAGAGTTGGAAGAGGATCTGGAGAATTCAAAGTCAACATTTGAGAAGAGCCGTTTCAATC 663
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 481 CAGAGTTGGAAGAGGATCTGGAGAACTCAAAGTCAACATTTGAGAAGAGCCGTTTCAATC 540
Query 664 TAGTGAATTCACTGATGACTATTGAAGCGAAAAAGAAGTATGAGTTTTTAGAATCTATTA 723
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 541 TAGTAAATTCACTGATGACTATTGAAGCGAAAAAGAAGTATGAGTTTTTAGAATCTATAA 600
Query 724 GCGCAATTATGGATGCCCATCTGAGATATTTCAAACTTGGATATGACTTGTTGAATCAAC 783
| ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 601 GTGCAATTATGGATGCCCATCTGAGATATTTTAAACTTGGATATGACTTGTTGAGTCAAC 660
Query 784 TGGAACCATTTATCCATCAGATATTAACATATGCTCAGCAATCAAAAGAACAGTCTAAGA 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TGGAACCATTTATCCATCAGATATTAACATATGCTCAGCAATCAAAAGAACAGTCTAAGA 720
Query 844 TTGAACAAGATCGACTAGCAAGACGCATTCAAGAATTCAGGACCCAGTCTGAATTAGACA 903
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 721 TTGAACAAGATCGACTAGCAAGACGCATTCAAGAATTCAGGACCCAGTCGGAATTAGACA 780
Query 904 GCCAACAGCTGGTCGCTAATGCAGAGTCGTCTGGTGCTAACGGGAACCGTGTTGGTGGGA 963
|||||||||| | |||||| ||||| | ||||||| |||||| ||||||| | |||||
Sbjct 781 GCCAACAGCTAGCCGCTAACGCAGAACCTTCTGGTGTTAACGGAAACCGTG--G-TGGGA 837
Query 964 ATATCCCTTACAAAAATACCGAAACAAGTTTAACAGCAGACAAGGAAGTAATTAAACAGG 1023
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 -T--CCCTTATAAAAATACCGAAACAAGTTTAACAGCAGACAAGGAAGTAATTAAACAGG 894
Query 1024 GGTATCTATTAAAGCGTTCGTCAAGTTTGAGAACTGATTGGAAAAGAAAGTTTTTTGTCC 1083
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 895 GGTATTTATTAAAGCGTTCGTCAAGTTTGAGAACTGATTGGAAAAGAAAGTTTTTTGTCC 954
Query 1084 TTGATAGTCATGGCTCCATGTACTATTACAGAACTAATGGTAATAAATCAATGGGATCTC 1143
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 TTGACAGTCATGGCTCCATGTACTATTACAGAACTAATGGTAATAAATCAATGGGATCTC 1014
Query 1144 ATCATCACTATAGTGGATCATCTGACCATAATACTGGAGTTTTTGGTCGATTTCGGGCAA 1203
| |||||||||||||| |||||||||||||||||||| || ||||||||||| || ||||
Sbjct 1015 AGCATCACTATAGTGGTTCATCTGACCATAATACTGGCGTATTTGGTCGATTCCGTGCAA 1074
Query 1204 GACATAATCGATCAGGTTCGCTCACTGAGGGCAGCTTAGGCTATAATACTATTGATCTTC 1263
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct 1075 GACATAATCGATCAGGTTCGCTTACTGAGGGCAGCTTAGGCTATAATACTATTGACCTCC 1134
Query 1264 GCACTTCTTTGATAAAACTAGACGCAGAAGACATGGATCTTCGTCTCTGTTTCAGAATTA 1323
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1135 GCACTTCTTTGATAAAACTAGACGCAGAAGACATGGATCTTCGGCTCTGTTTCAGAATTA 1194
Query 1324 TTTCTCCTCAAAAAACTTACACACTTCAGGCTGAAAATGGAGCAGATAGGATGGACTGGG 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1195 TTTCTCCTCAAAAAACTTACACACTTCAGGCTGAAAATGGAGCAGATAGGATGGACTGGG 1254
Query 1384 TAAATAAGATCACAAAAGCTATAGGGACGCTTCTCAATTCTCATTTTCTGCAACAGTCAC 1443
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1255 TAAATAAGATCACAACAGCTATAGGGACGCTTCTCAATTCTCATTTTCTACAACAGTCAC 1314
Query 1444 CTGTGCGATACTTGGATAA-AGACAACTCCAGTTCTGCTCCTGCTAATGCTGTCGTCTCC 1502
| ||||||| ||||||||| || |||| | ||||||||||||||||||||||||||||||
Sbjct 1315 CAGTGCGATTCTTGGATAAGAG-CAACACTAGTTCTGCTCCTGCTAATGCTGTCGTCTCC 1373
Query 1503 GGGGATCAAATTCGACATAATGATTCAAGACAAAATATCGGGGATGATGTCTCAACAATA 1562
|||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct 1374 GGGGATCAGATTCGACATAATGATGCAAGACAGAATATCGGGGATGATGTCTCAACAATA 1433
Query 1563 CTCAGAGGACTTCCGGGAAATAATGCATGTGCAGAGTGCAATGCTCCTGAGCCCGATTGG 1622
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1434 CTCAGAGGAATTCCGGGAAATAATGCATGTGCAGAGTGCAATGCTCCTGAGCCCGATTGG 1493
Query 1623 GCATCGTTAAATCTTGGAGTTTTGTTGTGCATTCAATGCTCTGGTGTTCACAGGAATCTC 1682
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 GCATCATTAAATCTTGGAGTTTTGTTGTGCATTCAATGCTCTGGTGTTCACAGGAATCTC 1553
Query 1683 GGGGTTCATATATCCAAGGTGAGGTCCCTCTCATTAGATGTGAAAGTGTGGGAGCCAACG 1742
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1554 GGCGTTCATATATCCAAGGTGAGATCCCTCTCATTAGATGTGAAAGTGTGGGAGCCAACG 1613
Query 1743 ATCTTGGACTTATTTAGAAATTTGGGTAATGTATACTGTAATTCACTGTGGGAGGGACTA 1802
||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1614 ATCTTGGACTTGTTTAGAAATTTGGGCAATGTGTACTGTAATTCACTGTGGGAGGGACTA 1673
Query 1803 CTTCACCTTGACGATGACTGCGAAGACGGATCAGCATTGTCGCATGCTTCAGTTTCAAAA 1862
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 1674 CTTCACCTTGACGATGACTGCGAAGACGGATCAGCAATGTCGCATGCATCAGTTTCAAAA 1733
Query 1863 CCATGTCCAGAAGATTCCTTTAGTGTGAAGGAGAAATACATTCTAGGAAAGTACCTGGAG 1922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1734 CCATGTCCAGAAGATTCCTTTAGTGTGAAGGAGAAATACATTCTAGGAAAGTACCTGGAG 1793
Query 1923 AAAGCATTAGTCATCAAGGATGAAAGTGAAGCAAA-CCTTTCTGCTGCGAGTAGAATATG 1981
|||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 1794 AAAGCATTAGTCGTCAAGGATGAAAGTGAAGCAAAACCTT-CTGCTGCGAGTAGAATATG 1852
Query 1982 GGAAGCTGTTCAAAGCAGAAACATACGAGAAATCTATCGACTTATAGTTACTACTGGGGA 2041
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1853 GGAAGCTGTTCAAAGCAGAAACATACGAGAAATCTATCGACTGATTGTTACTACTGGGGA 1912
Query 2042 TGTAAATATCATCAATACCAAGTTTGATGATATAACTGATATCGATGCATATCACCATAT 2101
||| ||||| ||||| |||||||| ||||||||||||||||| ||||||||||||||| |
Sbjct 1913 TGTGAATATTATCAACACCAAGTTCGATGATATAACTGATATTGATGCATATCACCATGT 1972
Query 2102 TGATGCAGCAGAGAAAGCAGTAAAGAAAAGACATGATCCAACTGTATGTCAGAGAATTAA 2161
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct 1973 TGATGCAGCAGAGAAAGCAGTAAAGAAAAGACATGACCCAACTGTGTGTCAGAGAATCAA 2032
Query 2162 AGAATCCAACGAACCAAGAAGCTGTCTTCAAGGATGCTCCTTGCTCCATGTGGCTTGTCA 2221
|||||||||| || || ||| |||||||||||| || |||||||||||||||||||||||
Sbjct 2033 AGAATCCAACCAAGCAGGAAACTGTCTTCAAGGCTGTTCCTTGCTCCATGTGGCTTGTCA 2092
Query 2222 CATTGGTGACTCTGTCTTGCTTGAATTGTTGTTGCAGTTTGGTGCTGACCTAAACATAAG 2281
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2093 CATTGGTGACTCTGTCTTGCTTGAACTGTTGTTGCAGTTTGGTGCTGACCTAAACATAAG 2152
Query 2282 AGATTATCACGGAAGGACTCCGTTGCACCATTGCATATCATCAGGGAACCACAAATTTGC 2341
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 2153 AGATTATCACGGAAGGACTCCGTTACACCATTGCATATCATCTGGGAACCACAAATTTGC 2212
Query 2342 AAAGATTCTACTGCGAAGAGGAGCACGTCCGTCGATAGAGGACGATGGAGGGCTAAGCGT 2401
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 2213 AAAGATTCTACTGCGAAGAGGAGCACGCCCATCGATAGAGGACGATGGAGGGCTAAGCGT 2272
Query 2402 TCTAGAAAGAGCGATGGAAATGGGAGCGATAACTGATGAAGAGCTCTTTCTTCTCTTAGC 2461
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2273 GCTAGAGAGAGCGATGGAAATGGGAGCCATAACTGATGAAGAGCTCTTTCTTCTCTTAGC 2332
Query 2462 CGAGTGCGCATAAACCTTCACTGCACA 2488
||||||||| |||||| |||||||||
Sbjct 2333 CGAGTGCGCGTAAACCGACACTGCACA 2359
> Ahg475245 jgi|Araly1|475245|fgenesh2_kg.2__375__AT1G60860.1
Length=2420
Score = 2032 bits (1100), Expect = 0.0
Identities = 1973/2387 (83%), Gaps = 89/2387 (4%)
Strand=Plus/Plus
Query 126 TTCTTCCT-TTTTGT-TTAACCAATGGC-GACCTTTATCAATCTGGAGGATTCCCCAATG 182
|||||| | |||||| |||| ||||||| | ||||||||||| |||||||||||||||
Sbjct 71 TTCTTCTTGTTTTGTCTTAA-CAATGGCTG-GTTTTATCAATCTTGAGGATTCCCCAATG 128
Query 183 TTTCAGAAACAGGTTTGT-TCCTTGGAGGGGACAGCTGACGAGCTTAAAGATCGTTGTCA 241
||||| |||||||||| | |||||||| |||||| |||| ||||||||||||||||||||
Sbjct 129 TTTCAAAAACAGGTTT-TCTCCTTGGAAGGGACAACTGATGAGCTTAAAGATCGTTGTCA 187
Query 242 GAAGCTATACAAAGGTGTTAAGAAGTTTATGGGGACTTTGGGAGAGGCATCTAAAGGAGA 301
|||| | |||||||||||||||||||| |||||| |||||||||||||||||| ||||
Sbjct 188 GAAGTTGTACAAAGGTGTTAAGAAGTTCATGGGGGCTTTGGGAGAGGCATCTACTGGAGT 247
Query 302 AAGTGCTTTTGCAGCTTGTCTGGAAGAATTTGGGGGTGGACCTGATGATCCTATCAGTCT 361
||||| ||||||| || ||| ||||| ||||| | ||||| ||||||||| ||||| |
Sbjct 248 CAGTGCCTTTGCAGATTCTCTAGAAGAGTTTGGTGCTGGACATGATGATCCCGTCAGTGT 307
Query 362 TTCAATTGGAGGGCCCGTTATATCCAAATTCATAAATGCACTTCGAGAGCT-TGCCTCTT 420
|||||||||||| || || ||||| ||||| |||||| ||||||||||||| | ||||||
Sbjct 308 TTCAATTGGAGGTCCAGTAATATCTAAATTTATAAATACACTTCGAGAGCTCT-CCTCTT 366
Query 421 ATAAGGAGTTTCTTTGCTCACAGGTGGAGCATGTGCTACTTGAGAGGTTGATGAACTTTA 480
|||||||||||||| |||||||||||||||| || ||||||||||| ||| |||||||
Sbjct 367 ATAAGGAGTTTCTTCGCTCACAGGTGGAGCACGTATTACTTGAGAGGCTGACAAACTTTA 426
Query 481 TTAGTGTTGATCTACAAGAAGCTAAGGAGTCTCGCCATCGATTTGATAAAGCTGCT-CAT 539
| | |||||||||||||||||| ||||||||||||| ||| ||||||||||||| | |||
Sbjct 427 TGACTGTTGATCTACAAGAAGCAAAGGAGTCTCGCCGTCGTTTTGATAAAGCTG-TCCAT 485
Query 540 TCGTATGATCAGTCGCGCGAAAAGTTTGTGTCTTTAAAGAAGAATACAAGAGGAGAAATT 599
|| ||||||||| | || |||||||||||||| ||||||||||||| |||||||| |||
Sbjct 486 TCTTATGATCAGGCACGTGAAAAGTTTGTGTCGCTAAAGAAGAATACCAGAGGAGACATT 545
Query 600 GTGGCAGAGTTGGAAGAGGATCTGGAGAATTCAAAGTCAACATTTGAGAAGAGCCGTTTC 659
|| || ||||||||||||||||||||||| || |||||| |||||||||| |||||||||
Sbjct 546 GTTGCTGAGTTGGAAGAGGATCTGGAGAACTCGAAGTCAGCATTTGAGAAAAGCCGTTTC 605
Query 660 AATCTAGTGAATTCACTGATGACTATTGAAGCGAAAAAGAAGTATGAGTTTTTAGAATCT 719
|||||||| |||||| ||||||| |||||||| ||||||||||| ||||| || ||||||
Sbjct 606 AATCTAGTAAATTCATTGATGACCATTGAAGCAAAAAAGAAGTACGAGTTCTTGGAATCT 665
Query 720 ATTAGCGCAATTATGGATGCCCATCTGAGATATTTCAAACTTGGATATGACT-TGTTGAA 778
|| || |||||||||||| ||||| |||||||||| || ||||| ||||| | | ||||
Sbjct 666 ATAAGTGCAATTATGGATTCCCATTTGAGATATTTTAAGCTTGGTTATGA-TCTATTGAG 724
Query 779 TCAACTGGAACCATT-TATCCATCAGATATTAACATATGCTCAGCAATCAAAAGAACAGT 837
|||| |||| || || ||||||||| |||| ||||| || || ||||||||||||||||
Sbjct 725 TCAATTGGAGCC-TTACATCCATCAGGTATTGACATACGCACAACAATCAAAAGAACAGT 783
Query 838 CTAAGATTGAACAAGATCGACTAGCAAGACGCATTCAAGAATTCAGGACCCAGTCTGAAT 897
|||||||||||||||||||| | |||||||||||||||||||||||||| || |||||||
Sbjct 784 CTAAGATTGAACAAGATCGATTTGCAAGACGCATTCAAGAATTCAGGACTCAATCTGAAT 843
Query 898 TAGACAGCCAACAG-C-TGGTCGCTAATGCAGAGTCG-TCTGGTGCTAACGGGAACCGTG 954
|||||||||||||| | | | ||||| ||||| || ||||||| | | || |||| ||
Sbjct 844 TAGACAGCCAACAGGCCTC-T-GCTAAAGCAGA-TCCCTCTGGTGTTGATGGAAACCATG 900
Query 955 TTGGTGG-GAATATCCCTTACAAAAAT--ACC-G-AAA--CAAGTTT-AACAGCAGACAA 1006
|| | | | |||||| |||| | | | ||| ||| ||| ||||||||||||
Sbjct 901 TTTATAGAGC-TATCCCCCGTAAAAGTGTAGAAGCAAATTCAA-TTTCAACAGCAGACAA 958
Query 1007 GGAAGTAATTAAACAGGGGTATCTATTAAAGCGTTC-GTCAAGTTTGAGAACTGATTGGA 1065
|||||||| |||||| ||||||||||||||||| || | | ||||||||| |||||||||
Sbjct 959 GGAAGTAACTAAACAAGGGTATCTATTAAAGCGATCAG-CTAGTTTGAGAGCTGATTGGA 1017
Query 1066 AAAGAAAGTTTTTTGTCCTTGATAGTCATGGCTCCATGTACTATTACAGAA-CTAATGGT 1124
|||| | ||| ||||| ||||| | ||||| ||| | ||||||||||||| | | |||
Sbjct 1018 AAAGGAGGTTCTTTGTGCTTGACAACCATGGATCCCTATACTATTACAGAAAC-ACCGGT 1076
Query 1125 AATAAATCAATGGGATCTCATCATCACTATAGTGGATCATCTGACCATAATA-CTGGAGT 1183
||||||||| ||||||||| ||| |||| ||||| | | ||| ||||||| | || ||
Sbjct 1077 AATAAATCAGCGGGATCTCAGCATTACTACAGTGGTTTAGGTGAGCATAATAGC-GGCGT 1135
Query 1184 TTTTGGTCGATTTCGGGCAAGACATAATCGATCAGGTTCGCTCACTGAGGGCAGCTTAGG 1243
||||| ||||||| ||||||| |||||||||| ||| || |||| ||| |||
Sbjct 1136 CTTTGGGAGATTTCGTTCAAGACACAATCGATCAGCTTC----AC--AGGGAAGCCTAGA 1189
Query 1244 CTATAATACT-ATTGATCTTCGCACTTCTTTGATAAAACTAGACGCAGAAGACATGGATC 1302
| |||| | || ||||| || || || |||||||| | || ||||| |||| ||||
Sbjct 1190 TTGCAATA-TGATCGATCTCCGTACCTCACTGATAAAATTGGAGGCAGAGGACACAGATC 1248
Query 1303 TTCGTCTCTGTTTCAGAATTATTTCTCCTCAAAAAACTTACACACTT-CAGGCTGAAAAT 1361
|||| |||||||| |||||||| ||||||||||| ||||||||| || ||||||||||||
Sbjct 1249 TTCGACTCTGTTTTAGAATTATATCTCCTCAAAAGACTTACACA-TTACAGGCTGAAAAT 1307
Query 1362 GGAGCAGATAGGATGGACTGGGTAAATAAGATCACAAAAGCTATAGGGACGCTTCTCAAT 1421
||||| ||||||||||| ||||| |||||||||||| ||||||| || | || |||
Sbjct 1308 GGAGCTGATAGGATGGATTGGGTCAATAAGATCACAGCAGCTATAACAACACGCCTGAAT 1367
Query 1422 TCTCATTTTCTGCAACAGTCACCTGTGCGATACTTGGATAAAGAC-A-ACTCCAGTTCTG 1479
|||||||||||||| |||||||| | |||||||||||||| || | ||| |||||||
Sbjct 1368 TCTCATTTTCTGCAGCAGTCACCAGCAAGATACTTGGATAAAAACTATACT--AGTTCTG 1425
Query 1480 CTCCTGCTAATG-CTGTCGTCTCCGGGGATCAAATTCGACATAATGATTCAA-GACAAAA 1537
|||||||| || | | | || || | |||||| | | || || || ||| ||| |||
Sbjct 1426 GTCCTGCTACTGAC-GACCTCACCCTGAATCAAAAACAAGATTATAAT-CAAAGACTAAA 1483
Query 1538 TATCGGGGATGATGTC-TCAACAATACTCAGAGGACTTCCGGGAAATAATGCATGTGCAG 1596
||| |||||||| ||| | | |||||||||||||| |||| |||||||| | ||||||||
Sbjct 1484 TATGGGGGATGACGTCCTTA-CAATACTCAGAGGAATTCCTGGAAATAACGAATGTGCAG 1542
Query 1597 AGTGCAATGCTCCTGAGCCCGATTGGGCATCGTTAAATCTTGGAGTTTTGTTGTGCATTC 1656
| ||||||| ||||| |||||||||||||| || ||||||||||||||| ||||||||
Sbjct 1543 AATGCAATGAACCTGACCCCGATTGGGCATCATTGAATCTTGGAGTTTTGATGTGCATTG 1602
Query 1657 AATGCTCTGGTGTTCACAGGAATCTCGGGGTTCATATATCCAAGGTGAGGTCCCTCTCAT 1716
|||| ||||||||||||||||||||||| || ||||||||||||||||| || ||| |||
Sbjct 1603 AATGTTCTGGTGTTCACAGGAATCTCGGCGTCCATATATCCAAGGTGAGATCGCTCACAT 1662
Query 1717 TAGATGTGAAAGTGTGGGAGCCAACGATCTTGGACTTATTTAGAAATTTGGGTAATGTAT 1776
| ||||||||||| |||||||| || ||||||||||||||| | || || || |||| ||
Sbjct 1663 TGGATGTGAAAGTATGGGAGCCTACAATCTTGGACTTATTTCGGAACTTAGGCAATGCAT 1722
Query 1777 ACTGTAATTCACTGTGGGAGG-GACTACTTCACCTTGACGATGACTGCGAAGACGGATC- 1834
|||||||||| ||||||||| | |||||||||||||| |||||| | ||| | || ||
Sbjct 1723 ACTGTAATTCGGTGTGGGAGGAG-CTACTTCACCTTGAGGATGACGGTGAAAAGGG-TCC 1780
Query 1835 AGCATTGTCGCA-T-GCTTCAGTTTCA-AAACCATGTCCAGAAGATTCCTTTAGTGTGAA 1891
| || | | || | || || | ||| ||||||| | ||||||||||||||| | ||||
Sbjct 1781 AACA--GACACACTTGCATC-GATTCCGAAACCATCTTCAGAAGATTCCTTTACTCTGAA 1837
Query 1892 GGAGAAATACATTC-TAGGAAAGTACCTGGAGAAAGCATTAGTCATCAAGGATGAAAGTG 1950
|||||||||||||| | |||||||||||||||||||| |||| |||| |||||||| |
Sbjct 1838 GGAGAAATACATTCAT-GGAAAGTACCTGGAGAAAGCGCTAGTTGTCAAAGATGAAAGAG 1896
Query 1951 AAGCAAAC-CTTTCTGC-TGCGAGTAGAATATGGGAAGCTGTTCAAAGCAGAAACATACG 2008
|||||||| || |||| | | ||||||||||||||||| ||||||||||| |||||| |
Sbjct 1897 AAGCAAACTCTA-CTGCCT-CAAGTAGAATATGGGAAGCGGTTCAAAGCAGGAACATAAG 1954
Query 2009 AGAAATCTATCGACTTATAGTTACTACTGGGGATGTAAATATCATCAATACCAAGTTTGA 2068
||| ||||| ||||| || || || | | |||| ||||||||||||||| ||||| ||
Sbjct 1955 AGACATCTACCGACTCATTGTAAC-A--GCAGATGCAAATATCATCAATACTAAGTTCGA 2011
Query 2069 TGATATAACTGATATCGATGCATATCACCAT-A---T--TGATGCAGCAGA-GAAAGCAG 2121
|||||| ||||| | |||||||||||||| | | ||||||| |||| ||| |
Sbjct 2012 TGATATTACTGACGTTGATGCATATCACCACCACCATAATGATGCACCAGATGAA-G--- 2067
Query 2122 TAAAGAAAAGACATGATCCAACTGTATGTCAGAGAATTAAAGAATCCAACGAACCAAGAA 2181
|||||||||| || ||||||| || || |||||||| || || || |||||||||||||
Sbjct 2068 TAAAGAAAAGGCACGATCCAAATGCGTGCCAGAGAATCAAGGATTCGAACGAACCAAGAA 2127
Query 2182 GCTGTCTTCAAGGATGCTCCTTGCTCCATGTGGCTTGTCACATTGGTGACTCTGTCTTGC 2241
|||||||||||| ||||| ||| | |||||||| ||||| | |||||| | ||||||
Sbjct 2128 ACTGTCTTCAAGGCTGCTCATTGTTGCATGTGGCGTGTCAAAGCGGTGACCCAATCTTGC 2187
Query 2242 TTGAATTGTTGTTGCAGTTTGGTGCTGACCTAAACATAAGAGATTATCACGGAAGGACTC 2301
||||| |||||||||||||||| |||||| ||||||| |||||||| |||||||| ||||
Sbjct 2188 TTGAACTGTTGTTGCAGTTTGGGGCTGACATAAACATGAGAGATTACCACGGAAGAACTC 2247
Query 2302 CGTTGCACCATTGCATATCATCAGGGAACCACAAATTTGCAAAGATTCTACTGCGAAGAG 2361
|||| ||||||||||| ||||||||||| ||| |||||||||| || ||||| ||||||
Sbjct 2248 CGTTACACCATTGCATCGCATCAGGGAACAACACATTTGCAAAGGTTTTACTGAGAAGAG 2307
Query 2362 GAGCACGTCCGTCGATAGAGGACGATGGAGGGCTAAGCGT-TCTAGAAAGAGCGATGGAA 2420
| || ||||| || ||||| || | |||||| |||| || | | |||||||| |||||
Sbjct 2308 GTGCTCGTCCATCAATAGAAGATGGTGGAGGATTAAGTGTGT-TGGAAAGAGCAATGGAG 2366
Query 2421 ATGGGAGCGATAACTGATGAAGAGCTCTTTCTTCTCTTAGCCGAGTG 2467
|||||||| ||||| |||||||||||||| ||||| ||||| |||||
Sbjct 2367 ATGGGAGCCATAACCGATGAAGAGCTCTTCCTTCTATTAGCAGAGTG 2413
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104481542035
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5