BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G11390.1 Length=2502 Score E Sequences producing significant alignments: (Bits) Value Ahg919955 jgi|Araly1|919955|scaffold_101236.1 3531 0.0 Ahg475162 jgi|Araly1|475162|fgenesh2_kg.2__292__AT1G61640.1 1164 0.0 > Ahg919955 jgi|Araly1|919955|scaffold_101236.1 Length=2151 Score = 3531 bits (1912), Expect = 0.0 Identities = 2078/2158 (96%), Gaps = 12/2158 (1%) Strand=Plus/Plus Query 304 TTTCTCACCATCTTCGTCGCTATGTCAAGAGTTT-TGATCTCTAAAATCGTTGGAAAGCA 362 |||||||||||||||||||||||||||||| ||| ||||||||| || |||||||| || Sbjct 1 TTTCTCACCATCTTCGTCGCTATGTCAAGA-TTTCTGATCTCTAGGATTGTTGGAAAACA 59 Query 363 AACACAATCTCT-TGTCTCGAACCAGAAAGATAGAGTGTCTCAATGGGGAAGCTATAGAA 421 ||| |||||||| | | |||||||||||||| |||||||| ||||||||||||||||||| Sbjct 60 AACGCAATCTCTAT-TGTCGAACCAGAAAGAGAGAGTGTCCCAATGGGGAAGCTATAGAA 118 Query 422 CTGCTTTTACAGCTGCTCTAAGGTCGCCTCAGCTCAGAACTTACTCTTCATCTGGTAGGA 481 ||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| Sbjct 119 CTGCTTTTACAGCTGCTCTAAGGTCGCCTCAATTTAGAACTTACTCTTCCTCTGGTAGGG 178 Query 482 TTCCGAGTAATGTGTATTGTACTTTT-GCCTTTAGAGATCTCAAAGGAAGTTTTTTAAGT 540 |||||||||||| |||||||| |||| |||||||||||||| |||||||||||||| ||| Sbjct 179 TTCCGAGTAATGGGTATTGTA-TTTTGGCCTTTAGAGATCTTAAAGGAAGTTTTTTGAGT 237 Query 541 AATCATCTGTCTCGAAGTTATACTACTGCCCCTGCAAGAAATGTAGTTAGTCATCATGCC 600 ||||||||||| |||| |||| |||||| |||||||||||||||||||||||||||| || Sbjct 238 AATCATCTGTCCCGAAATTATTCTACTGTCCCTGCAAGAAATGTAGTTAGTCATCATACC 297 Query 601 CAAATTGCTTGGAGAAGGCTTCATTATAAGTATTCTGAGCGTATTAGTACCATTGCTCAG 660 ||| ||||||||| |||||||||||||||||||||||||||||| ||||| || |||||| Sbjct 298 CAAGTTGCTTGGAAAAGGCTTCATTATAAGTATTCTGAGCGTATAAGTACTATGGCTCAG 357 Query 661 GCGTTTAGCTTGTCTCTTACCCGTTCGCACTTGTTAATACCTGGGATCGTTGCTGTCACT 720 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 358 GCGTTCAGCTTGTCTCTTACCCGTTCACACTTGTTAATACCTGGGATCGTTGCTCTCACT 417 Query 721 TGTGGACAAGTAGCATGGGCACAAAGAGCTCCTGGTTCGGGGATAAATCACTATGCTTCA 780 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 418 TGTGGACAAGTAGCTTGGGCTCAAAGAGCTCCTGGTTCGGGGATAAATCACTATGCTTCA 477 Query 781 GATAAATCTCTCTATACAAGGGCTAAGAATGGTCCTATCTTTCTGTCTTCGTTATTGTTT 840 |||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 478 GATAAATCCCTTTATACAAGGGCGAAGAACGGTCCTATCTTTCTGTCTTCGTTATTGTTT 537 Query 841 TCGGTTATAGAGGGTTTTATCTTGATTGGGAGGGCTTTTTATATAGCTTGTTTGTTTACT 900 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 538 TCGGTTATAGAGGGTTTTATTTTGATTGGGAGGGCTTTTTATATAGCTTGTTTGTTTACT 597 Query 901 CCTACTATTCTGATGGGGCTGGTTGTGGAATCATGTGGGCCTCGTTTTAGGAAAATATGG 960 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 CCTAGTATTCTGATGGGGCTGGTTGTGGAATCATGTGGGCCTCGTTTTAGGAAAATATGG 657 Query 961 CTTGAGATGGTCCATCGAACTCTGGAAAGAGCAGGTCCTGCTTTTATCAAATGGGGTCAA 1020 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 658 CTTCAGATGGTCCATCGAACTCTGGAAAGAGCAGGTCCTGCTTTTATCAAATGGGGTCAA 717 Query 1021 TGGGCAGCCACGCGACCTGATCTATTCCCCAAGGATTTGTGTTCACAGCTCTCAAAGCTT 1080 ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct 718 TGGGCAGCCACACGACCAGATCTATTCCCCAAGGATTTGTGTTTACAGCTCTCAAAGCTT 777 Query 1081 CACAGTAATGCTCCTGAGCATAGCTTCGCCTACACTAAGAAAACTATCGAGAAGGCATTT 1140 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| Sbjct 778 CACAGTAATGCTCCTGAGCATAGCTTTGCCTACACTAAGAAAACTATTGAGAAGGCGTTT 837 Query 1141 GGTCGTAAACTTTCTGAGATATTTGAGGAGTTTGATGAGGTGCCAGTGGCATCTGGGAGT 1200 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 838 GGTCGTAAACTTTCTGAGATATTTGAGGAGTTTGAAGAGGTGCCAGTGGCATCTGGGAGT 897 Query 1201 ATTGCCCAAGTACATAGAGCTTCTTTAAGGTTTCAGTATCCAGGACAAAAGTCCAAGTCT 1260 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 898 ATTGCTCAAGTACATAGAGCTTCTTTAAGGTTTCAGTATCCAGGACAAAAGTCCAAGTCT 957 Query 1261 TCGCTGGTTGCGGTTAAAGTTAGACATCCGGGTGTTGGTGAATCGATTAGGAGAGATTTT 1320 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 958 TCGTTGGTTGCTGTTAAAGTTAGACATCCGGGTGTTGGTGAATCGATTAGGAGAGATTTT 1017 Query 1321 GTGATAATTAATTTGGTGGCAAAGATATCGACTTTAATTCCAGCTTTGAAATGGTTGAGA 1380 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1018 GTGATAATTAATTTGGTGGCAAAGATATCTACTTTAATTCCAGCTTTGAAATGGTTGAGA 1077 Query 1381 TTGGACGAGAGTGTGCAACAGTTTGGTGTCTTCATGTTGTCTCAAGTTGATCTCGCGAGG 1440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1078 TTGGACGAGAGTGTGCAACAGTTTGGTGTCTTCATGTTGTCTCAAGTTGATCTCGCGAGG 1137 Query 1441 GAAGCTTCACATTTGAGTCGGTTCATATATAACTTCCGTAGATGGAAGGATGTCTCTTTC 1500 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1138 GAAGCTTCACATTTGAGTCGGTTCATATATAACTTTCGTAGATGGAAGGATGTCTCTTTC 1197 Query 1501 CCTAAACCTGTGTATCCTCTTGTACATCCTGCTGTTTTGGTGGAGACATATGAGCATGGA 1560 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 1198 CCTAAACCTGTGTATCCCCTTGTACATCCTGCTGTTTTGGTGGAGACATATGAGCACGGA 1257 Query 1561 GAAAGTGTGGCACGTTATGTTGATGGAATGGAAGGACATGAATGGATTAAGACTAGATTG 1620 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1258 GAAAGCGTGGCACGTTATGTTGATGGAATGGAAGGACATGAATGGATTAAGACTAGATTG 1317 Query 1621 GCTCACATCGGGACCCATGCCCTCTTGAAGATGCTCTTGGTTGATAACTTTATTCACGCT 1680 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1318 GCTCATATCGGGACCCATGCCCTCTTGAAGATGCTCTTGGTTGATAACTTTATTCACGCT 1377 Query 1681 GACATGCATCCGGGAAATATCCTTGTCCGGAAAAAGGCTTCCCGTGGAGGCCTTTTCAAA 1740 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1378 GACATGCATCCGGGAAATATCCTTGTCCGGAAAAAGGCTTCCGGTGGAGGCCTTTTCAAA 1437 Query 1741 ACGAAGAAGCCTCACATTGTTTTCCTTGATGTGGGAATGACTGCAGAACT-TGCAAAGAA 1799 |||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| Sbjct 1438 ACGAAGAAGCCTCACATTGTTTTCCTTGATGTGGGAATGACTGCGGAACTCT-CAAAGAA 1496 Query 1800 TGACCGAGAGAACTTACTTGACTTTTTCAAGGCGGTTGCGCGTAGAGATGGCCGGACTGC 1859 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1497 CGACCGAGAGAACTTACTTGATTTTTTCAAGGCGGTTGCGCGTAGAGATGGCCGGACTGC 1556 Query 1860 TGCTGAACGAACACTTAAATTATCAAGAAAGCAGAATTGTCCCAATCCAGAGGCTTTTAT 1919 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1557 TGCTGAACGAACACTTAAATTATCAAGAAAGCAGAATTGTCCCAATCCAGAGGCTTTTAT 1616 Query 1920 CGAGGAAGTAGAGGAAGCATTCAAATTCTGGGGAACCCCTGAGGGAGATTTAGTACATCC 1979 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1617 CGAGGAAGTAGAGGAGGCATTCAAATTCTGGGGAACCCCTGAGGGAGATTTAGTACATCC 1676 Query 1980 AGCAGATTGTATGCACGAATTACTTGAGAAAGTAAGACGTCATAGAGTAAATATTGATGG 2039 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1677 AGCAGATTGTATGCACGAATTACTTGAGAAAGTAAGACGTCATAGAGTTAATATTGATGG 1736 Query 2040 GAATGTGTGCACTGTTATGGTGACAACATTAGTTCTCGAGGGTTGGCAACGGAAACTTGA 2099 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1737 GAATGTGTGCACTGTGATGGTGACAACATTAGTTCTCGAGGGTTGGCAACGGAAACTTGA 1796 Query 2100 CCCAGGATATGATGTGATGCACACGTTGCAAACAATGGTGTTGAAAACCGACTGGGCTAA 2159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1797 CCCAGGATATGATGTGATGCACACGTTGCAAACAATGGTGTTGAAAACCGACTGGGCTAA 1856 Query 2160 GTCTCTTTCTTATACGGTGGATGGTCTGATGGCGCCGTAGGCGAAGAAAGGTTC-CATCT 2218 |||||||||||| |||||||||||||||||||||||||||| || |||||| || ||||| Sbjct 1857 GTCTCTTTCTTACACGGTGGATGGTCTGATGGCGCCGTAGGAGATGAAAGG-TCTCATCT 1915 Query 2219 TTTTGAAATTTTGTTTGTTATCATCATAGGAGTCGAAACAATTTACACATCTTAGATGAG 2278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1916 TTTTGAAATTTTGTTTGTTATCATCATAGGAGTCGAAACAATTTACACATCTTAGATGAG 1975 Query 2279 AGAACATAGAAAGAAAGTACATGTTCTTATGTTCcttttgtttttttctttcattctttt 2338 |||||||||||||||||||||||||||| || |||| ||| ||| || |||||||||||| Sbjct 1976 AGAACATAGAAAGAAAGTACATGTTCTTGTGATCCTCTTG-TTTATT-TTTCATTCTTTT 2033 Query 2339 gtcttttgctttttATTGTCATGGATTTTGGTTCATTCTAACTACATAGATTGTATTTAC 2398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2034 GTCTTTTGCTTTTTATTGTCATGGATTTTGGTTCATTCTAACTACATAGATTGTATTTAC 2093 Query 2399 GCGGTTGGTTTCCGTTATAAACCGCCTGTTTATTCTCTGAACCAAAGAACAGTGAACA 2456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2094 GCGGTTGGTTTCCGTTATAAACCGCCTGTTTATTCTCTGAACCAAAGAACAGTGAACA 2151 > Ahg475162 jgi|Araly1|475162|fgenesh2_kg.2__292__AT1G61640.1 Length=2227 Score = 1164 bits (630), Expect = 0.0 Identities = 1293/1606 (81%), Gaps = 73/1606 (5%) Strand=Plus/Plus Query 652 ATTGCTCAGGCGTTTAGCTTGTCTCTTA-CCCGTTCGCACTTGTTAATACCTGGGATCGT 710 |||||||| ||||||||||||||| ||| |||||||||||||||| |||| || || | Sbjct 422 ATTGCTCAAGCGTTTAGCTTGTCT-TTAGCCCGTTCGCACTTGTTGTTACCCGGTTTC-T 479 Query 711 T-GCTGTCACTTGTGGACAAGTAGCATGGGCACAAA--G-AGCTCCTGGTTCGGGGATAA 766 | ||| | |||||| ||||||| |||| || |||| | ||||| | || | | | Sbjct 480 TGGCTCTTACTTGTAGACAAGTGGCATATGCGCAAAGGGTGGCTCCAAG-TC-CTG-TCA 536 Query 767 ATCACTATGCTTCAGATAAATCTCTCTATACAAGG-GCT-AAGAATGGT-CCTATCTTTC 823 | | | | ||||| | ||| ||| || ||| | | | || | |||||| || Sbjct 537 TTTATTCTCCTTCACACGTTTCT-TCT-TA-TAGGCGTTCGATAAACTTCCCTATCATTA 593 Query 824 TGTCTTCGTTATTG-TTT-T-CGGTTATAGAGG-GTTTTATCTTGATTGGGAGGGCTTTT 879 | || || |||||| ||| | |||| | | ||| ||| | || |||||||||| ||| | Sbjct 594 TCTCGTCTTTATTGTTTTCTGCGGTCA-A-AGGTGTTGT-TC-TGATTGGGAGAGCTCTC 649 Query 880 TATATAGC-TTGTTTGTTTACTCCTACTATTCTGATGGGGC-TGGTTGTGGAATCATGT- 936 ||| |||| || ||||||| |||| | | || | || ||| | |||| ||| | ||| Sbjct 650 TATTTAGCATT-TTTGTTTTCTCCAAATGTTATAAT--GGCTTTGTTG-GGATTTGTGTG 705 Query 937 -GGGCCTCGTTTTAGGAAAATATGGC--T-TGAGATGGTCCATCGAACTCTGGAAAGAGC 992 |||||||||| | | ||| | || | |||| | ||||||||||| |||||||||| Sbjct 706 CGGGCCTCGTTACA-G-AAAGCT-GCAGTATGAGGTCCTCCATCGAACTTTGGAAAGAGC 762 Query 993 AGGTCCTGCTTTTATCAAATGGGGTCAATGGGCAGCCACGCGACCTGATCTATTCCCCAA 1052 |||||||||||||||||||| || |||||| ||||| |||||||||| || ||| Sbjct 763 AGGTCCTGCTTTTATCAAATTTGGCCAATGGATTGCCACACGACCTGATCGCTTTAACAA 822 Query 1053 GGATTTGTGTTCACAGCTCTCAAAGCTTCACAGTAATGCTCCTGAGCATAGCTTCGCCTA 1112 ||||||||||| ||||| ||||||||||||||||||||||||||||| || || || | Sbjct 823 GGATTTGTGTTTGCAGCTTTCAAAGCTTCACAGTAATGCTCCTGAGCACAGTTTTGCGTT 882 Query 1113 CACTAAGAAA-A-CTATCGAGAA-GGCATTTGGTCGTAAACTTTCTGAGATATTTGAGGA 1169 ||| || ||| | | ||||| || ||||||||||||||||| ||||| ||||||||||| Sbjct 883 CACCAA-AAAGAGC-ATCGA-AACTGCATTTGGTCGTAAACTCTCTGAAATATTTGAGGA 939 Query 1170 GTTTGATGAGGTGCCAGTGGCATCTGGGAGTATTGCCCAAGTACATAGAGCTT-CTTTAA 1228 |||||||||| ||||||||||||||||||||| || |||||||| |||||| ||| || Sbjct 940 ATTTGATGAGGCGCCAGTGGCATCTGGGAGTATAGCTCAAGTACACCGAGCTTCCTTGAA 999 Query 1229 GGTTTCAGTATCCAGGACAAAA-GTCCAAGTCTTCGCTGGTTGCGGTTAAAGTTAGACAT 1287 ||||||||||||||||||||| || ||||||||| ||||| ||||||||||||||| Sbjct 1000 -GTTTCAGTATCCAGGACAAAAGGT-GAAGTCTTCGGAAGTTGCTGTTAAAGTTAGACAT 1057 Query 1288 CCGGGTGTTG-GTGAATCGATTAGGAGAGATTTTGTGATAATTAATTTGGTGGCAAAGAT 1346 || |||||| | ||| |||| | | |||||||||||||||||||||| ||||||||| | Sbjct 1058 CCTTGTGTTGAG-GAAACGATGAAGCGAGATTTTGTGATAATTAATTTTGTGGCAAAGCT 1116 Query 1347 ATCGACTTTAATTCCAGCTTTGAAATGG-TTGAGATTGGACGAGAGTGTGCAACAGTTTG 1405 | | ||||| ||||| | |||| ||| || |||||||||||| |||||||||||||| Sbjct 1117 AACTACTTTTATTCCGGGGCTGAATTGGCTT-AGATTGGACGAGTGTGTGCAACAGTTTA 1175 Query 1406 GTGTCTTCATGTTGTCTCAAGTTGATCTCGCGAGGGAAGCTTCACATTTGAGTCGGTTCA 1465 |||||| ||||||||| |||||||||||| | ||||||||||| |||||||||||||| | Sbjct 1176 GTGTCTACATGTTGTCCCAAGTTGATCTCTCAAGGGAAGCTTCTCATTTGAGTCGGTTTA 1235 Query 1466 TATATAACTTCCGTAGATGGAAGGATGTCTCTTTCCCTAAACCTGTGTATCCTCTTGTAC 1525 | |||||||||||| ||||||| ||||||||||| ||||| || | ||||| ||| ||| Sbjct 1236 TTTATAACTTCCGTGGATGGAAAGATGTCTCTTTTCCTAAGCCCATCTATCCGCTTATAC 1295 Query 1526 ATCCTGCTGTTTTGGTGGAGACATATGAGCATGGAGAAAGTGTGGCACGTTATGTTGATG 1585 |||| ||||||||||| ||||| |||||||| ||||| || ||||| |||||||| |||| Sbjct 1296 ATCCCGCTGTTTTGGTCGAGACGTATGAGCACGGAGAGAGCGTGGCTCGTTATGTCGATG 1355 Query 1586 GAAT-GGAAGGACATGAATGGATTAAGACTAGATTGGCTCACATCGGGACCCATGCCCTC 1644 | | |||||||||||| || ||||| ||| | | ||||| ||||| || ||||| ||| Sbjct 1356 G-CTCAGAAGGACATGAAAGGCTTAAGGCTAAAGTAGCTCATATCGGAACTCATGCTCTC 1414 Query 1645 TTGAAGATGCTCTTGGTTGATAACTTTATTCACGCTGACATGCATCC-GGGAAATATCCT 1703 ||||| |||||| |||| || ||||| ||||| ||||| |||||||| ||| ||||| || Sbjct 1415 TTGAAAATGCTCCTGGTCGACAACTTCATTCATGCTGATATGCATCCTGGG-AATATTCT 1473 Query 1704 TGTCCGGAAAAAGGCTTCCCGTGGAGGCCTTTTCAAAACGAA-GAAGCCTCACATTGTTT 1762 ||||||| ||| | | || |||| ||||||| | | || |||||| |||||||||| Sbjct 1474 TGTCCGGCCAAACAATACTCGAAGAGGTCTTTTCAGATC-AAGGAAGCCACACATTGTTT 1532 Query 1763 TCCTTGATGTGGGAATGACTGCAGAACT-TGCAAAGAA-TGACCGAGAGAACTTACTTGA 1820 |||| |||||||| |||||||| ||||| | |||| || ||||||||| ||| |||| | Sbjct 1533 TCCTAGATGTGGGCATGACTGCGGAACTCT-CAAA-AATTGACCGAGATAACCTACTCGG 1590 Query 1821 CTTTTTCAAGGCGGTTGCGCGTAGAGATGGCCGGACTGCTGCTGAACGAACACTTAAATT 1880 ||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 1591 GTTTTTCAAGGCAGTTGCACGTAGAGACGGCCGGACTGCTGCTGAACGAACACTTAAATT 1650 Query 1881 ATC-AAGA-AAGCAGAATTGTCCCAATCCAGAGGCTTTTATCGAGGAAGTAGAGGAAGCA 1938 ||| || | || ||||||||||| ||||| |||| |||||| |||||||||| || ||| Sbjct 1651 ATCTAA-ACAA-CAGAATTGTCCTAATCCTCAGGCCTTTATCAAGGAAGTAGAAGATGCA 1708 Query 1939 TTCAAATTCTGGGGAACCCCTGAGGGAGATTTAGTACATCCAGCAGATTGTATGCACGAA 1998 || | |||||||||||| || |||||| |||| |||||||| ||||||||||||||| Sbjct 1709 TTTACATTCTGGGGAACAGAGGAAGGAGATCTAGTCCATCCAGCGGATTGTATGCACGAA 1768 Query 1999 TTACTT-GAGAAAGTAAGACGTCATAGAGTAAATATTGATGGGAATGTGTGCACTGTTAT 2057 || || |||||| | || ||||||||||| ||||| || || ||||| | ||| || || Sbjct 1769 CTA-TTCGAGAAAATGAGGCGTCATAGAGTTAATATCGACGGCAATGTATCCACCGTGAT 1827 Query 2058 GGTGACAACATTAGTTCTCGAGGGTTGGCAACGGAAACTTGACCCAGGATATGATGTGAT 2117 | | |||||||||||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct 1828 GTTTACAACATTAGTTCTCGAGGGTTGGCAACGGAAACTTGATCCGGGATACGATGTGAT 1887 Query 2118 GCACACGTTGCAAACAATGGTGTTGAAAACCGACTGGGCT-AAGTCTCTTTCTTATACGG 2176 || ||| | ||||||||| || ||||||| || ||| | || || |||||||| ||| Sbjct 1888 GCGTACGCTACAAACAATGCTGCTGAAAACGGATTGGA-TGAAATCACTTTCTTACACGA 1946 Query 2177 TGGATGGTCTGATGGCGCCGTAGGC-GAAGAAAGGTTCCATCTTTT 2221 | ||||| |||||||| |||||| ||| || ||||| ||||||| Sbjct 1947 TCGATGGACTGATGGCTCCGTAGATTGAA-AA-GGTTCAATCTTTT 1990 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 94311446620 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5