BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G11910.1 Length=1970 Score E Sequences producing significant alignments: (Bits) Value Ahg471340 jgi|Araly1|471340|fgenesh2_kg.1__1294__AT1G11910.1 2878 0.0 Ahg475117 jgi|Araly1|475117|fgenesh2_kg.2__247__AT1G62290.2 1339 0.0 Ahg490093 jgi|Araly1|490093|fgenesh2_kg.6__3227__AT4G04460.1 379 4e-104 Ahg920141 jgi|Araly1|920141|scaffold_101422.1 159 5e-38 > Ahg471340 jgi|Araly1|471340|fgenesh2_kg.1__1294__AT1G11910.1 Length=1856 Score = 2878 bits (1558), Expect = 0.0 Identities = 1743/1832 (95%), Gaps = 14/1832 (1%) Strand=Plus/Plus Query 1 ATCCCTCCTCACAGTCATCTCTTTCTTCGCAAATAAATGT-AACCATCTCTCTTCTCGTT 59 ||| ||||||||||| |||||||||||| ||||||||||| ||| ||||||| ||||||| Sbjct 1 ATCTCTCCTCACAGTGATCTCTTTCTTCCCAAATAAATGTAAACTATCTCTCGTCTCGTT 60 Query 60 TTCTTCAACAAAAATCCTCATTTCTCTGAGAATCTGGTGCTTTAGCTTTGGTAAAATGAA 119 |||||| | | |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 61 TTCTTC--C-ACAATCCTCATTTCTCTGAGAATCTGGTGC-TTAGCTTTTGTAAAATGAA 116 Query 120 GATATACTCTAGAACGGTTGCTGTTTCACTCATTGTGTCATTCCTCCTGTGTTTCTCTGC 179 ||| ||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct 117 GATTTACTCTACAACGGTTGCTGTTGCACTCATTGTGTCATTCCTACTGTTTTTCTCTGC 176 Query 180 CTTTGCTGAGCGCAATGACGGGACCTTCAGAGTTGGACTGAAAAAACTCAAGTTGGATTC 239 |||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 177 CTTTTCTGAGCGCAATGACGGGACCTTCAGAGTTGGCCTCAAAAAACTCAAGTTGGATTC 236 Query 240 GAAAAATCGGCTTGCAGCACGCGTCGAATCCAAGCAAGAAAAGCCCCTGAGAGCTTACAG 299 ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 237 CAAAAACCGGCTTGCAGCACGCGTCGAATCCAGGCAAGATAAGCCCCTGAGAGCTTACAG 296 Query 300 ACTTGGAGATTCTGGAGATGCTGATGTTGTTGTGCTTAAGAATTATCTAGATGCTCAGTA 359 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 297 CCTTGGAAATTCTGAAGATGCTGATGTTGTCGTGCTTAAGAATTATCTAGATGCTCAGTA 356 Query 360 CTATGGTGAGATCGCCATTGGTACTCCACCTCAGAAGTTCACTGTGGTTTTTGACACTGG 419 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 CTACGGTGAGATCGCTATTGGTACTCCACCTCAGAAGTTCACTGTGGTTTTTGACACTGG 416 Query 420 GAGCTCTAACCTCTGGGTGCCATCATCAAAATGCTATTTCTCACTTGCATGTCTCTTGCA 479 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 417 GAGCTCTAACCTCTGGGTGCCATCATCAAAATGCTATTTCTCGCTTGCATGTCTCTTGCA 476 Query 480 TCCCAAATACAAGTCGTCTCGTTCAAGCACATATGAGAAGAATGGAAAAGCTGCCGCAAT 539 ||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||| Sbjct 477 TCCCAAATACAAGTCTTCGCGTTCAAGCACATATGAGAAGAATGGAAAATCTGCCGCAAT 536 Query 540 TCATTACGGCACTGGAGCAATTGCTGGtttttttAGTAATGATGCTGTCACAGTTGGCGA 599 |||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct 537 TCATTATGGCACTGGTGCAATTGCTGGTTTTTTCAGTAATGATGCCGTCACAGTTGGCGA 596 Query 600 TTTAGTTGTCAAGGATCAGGAGTTTATCGAGGCAACCAAGGAGCCTGGTATAACATTTGT 659 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 597 TTTAGTTGTCAAGGATCAGGAATTTATTGAGGCAACCAAGGAGCCTGGTATAACATTTGT 656 Query 660 TGTAGCTAAATTTGATGGTATCCTTGGTCTTGGATTCCAAGAGATCTCTGTTGGAAAAGC 719 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 657 TGTAGCTAAGTTTGATGGTATCCTTGGTCTTGGATTCCAAGAGATCTCTGTTGGAAATGC 716 Query 720 TGCTCCTGTTTGGTACAACATGCTCAAGCAAGGCCTTATCAAGGAGCCGGTTTTTTCATT 779 |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 717 CGCTCCTCTTTGGTACAACATGCTCAAGCAAGGCCTTATCAAGGAGCCAGTTTTTTCATT 776 Query 780 TTGGCTTAACCGTAATGCAGATGAAGAAGAAGGTGGTGAACTTGTATTTGGAGGTGTTGA 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 777 TTGGCTTAACCGTAATGCAGATGAAGAAGAAGGTGGTGAACTTGTATTTGGAGGTGTTGA 836 Query 840 TCCAAATCATTTCAAGGGCAAACATACATATGTTCCTGTGACACAAAAGGGCTACTGGCA 899 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 837 TCCAAATCATTTCAAGGGCAAACATACATATGTTCCTGTGACACAAAAAGGCTACTGGCA 896 Query 900 GTTTGACATGGGTGATGTTCTTATTGGCGGTGCACCCACTGGGTTCTGTGAAAGTGGCTG 959 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 897 GTTTGACATGGGTGATGTCCTTATTGGCGGTGCACCCACTGGGTTCTGTGAAAGTGGCTG 956 Query 960 TTCTGCGATAGCAGATTCTGGTACATCTTTGCTTGCCGGTCCAACGACTATAATCACCAT 1019 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 957 TTCTGCGATAGCAGATTCTGGTACATCTTTGCTTGCAGGTCCAACGACTATTATCACCAT 1016 Query 1020 GATAAACCATGCTATTGGAGCAGCTGGAGTTGTTAGCCAGCAGTGCAAGACTGTTGTGGA 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1017 GATAAACCATGCTATTGGAGCAGCTGGAGTTGTTAGCCAGCAGTGCAAGACTGTCGTGGA 1076 Query 1080 TCAATACGGGCAGACCATTTTGGATTTACTTTTGTCTGAGACCCAACCGAAGAAAATCTG 1139 ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 1077 TCAATACGGGCAGACTATTTTAGATTTACTTTTGTCTGAGACCCAACCAAAGAAAATCTG 1136 Query 1140 CTCGCAGATTGGTCTGTGTACTTTTGATGGTACCCGTGGTGTCAGTATGGGCATTGAGTC 1199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1137 CTCGCAGATTGGTCTGTGTACTTTTGATGGTACCCGTGGTGTCAGTATGGGCATTCAGTC 1196 Query 1200 GGTGGTGGACAAGGAAAACGCCAAATTGTCTAATGGTGTTGGAGATGCTGCGTGTTCTGC 1259 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1197 GGTGGTGGACAAGGAAAACGCCAAATTGTCTAATGGTGTTGGAGATGCTGCGTGCTCTGC 1256 Query 1260 ATGTGAGATGGCTGTTGTGTGGATCCAGAGCCAGTTGAGGCAAAACATGACTCAAGAGCG 1319 |||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||| || Sbjct 1257 ATGTGAGATGGCAGTTGTGTGGATCCAGAGCCAGTTGAGGCAGAACATGACTGAAGAACG 1316 Query 1320 CATATTGAACTACGTCAACGAGCTATGTGAACGCCTCCCCAGCCCAATGGGAGAGTCTGC 1379 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1317 CATATTGAACTACGTCAACGAGCTATGTGAACGCCTTCCCAGCCCAATGGGAGAGTCTGC 1376 Query 1380 AGTTGACTGTGCACAACTGTCAACAATGCCCACTGTTTCACTT-ACCATTGGAGGCAAAG 1438 |||||||||||| ||||| ||||||||||||||||||||| || |||||||||||||||| Sbjct 1377 AGTTGACTGTGCTCAACTCTCAACAATGCCCACTGTTTCA-TTCACCATTGGAGGCAAAG 1435 Query 1439 TATTTGATCTTGCTCCAGAAGAGTATGTTCTGAAAGTTGGTGAGGGACCTGTGGCACAGT 1498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1436 TATTTGATCTTGCTCCAGAAGAGTATGTTCTGAAAGTTGGTGAGGGACCTGTGGCACAGT 1495 Query 1499 GCATCAGTGGTTTTATTGCTCTTGACGTTGCTCCACCTCGTGGACCTCTCTGGATCTTGG 1558 |||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||| Sbjct 1496 GCATCAGTGGCTTTATTGCTCTCGATGTCGCTCCACCTCGTGGACCTCTCTGGATCTTGG 1555 Query 1559 GAGATGTGTTCATGGGCAAATACCACACCGTATTTGACTTTGGTAACGAACAGGTCGGGT 1618 ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| | Sbjct 1556 GAGATGTGTTCATGGGCAAATACCACACCGTGTTCGACTTCGGTAACGAACAGGTCGGAT 1615 Query 1619 TTGCAGAGGCAGCCTAAACACGATCGGGTTGGTGTCGCGTATGGTTTTAGTATGAACAAT 1678 ||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 1616 TTGCAGAGGCAGCGTAAACACGGTCGGGTTGGTTTCGCGTATGGTTTTAGTATGAACAAT 1675 Query 1679 CTGCGTCTCAAGTGTTGTTTGTATGTTTTCTGGAGTTGAGGACTTTGAGTCGTAGTAGAA 1738 ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1676 CTGTGTCTCAAGTGTTGTTTGTATGTTTTCTGGAGTTGAAGACTTTGAGTCGTAGTAGAA 1735 Query 1739 ATGGTGGCGCAGTTCCTTTTAAG-TT----G-TTTCCTAACGAAAAAA-GGCCTTTGTAG 1791 |||||||| ||| | |||||| || | |||||||||||||||| ||||||||||| Sbjct 1736 ATGGTGGCACAGCTACTTTTATCCTTTTATGGTTTCCTAACGAAAAAATGGCCTTTGTAG 1795 Query 1792 TTTTGAAGGCATTGGCTTTGTAAATACCTTCT 1823 |||||||||||||||||||||||||||||||| Sbjct 1796 TTTTGAAGGCATTGGCTTTGTAAATACCTTCT 1827 > Ahg475117 jgi|Araly1|475117|fgenesh2_kg.2__247__AT1G62290.2 Length=1726 Score = 1339 bits (725), Expect = 0.0 Identities = 1280/1543 (83%), Gaps = 57/1543 (4%) Strand=Plus/Plus Query 122 TATACTCTAGAACGGTTGCTGTTTCACTCATTGTGTCATTCCTCCTGTGTTTCTCTGCCT 181 ||||| | ||||| ||||| ||||| ||| |||||| ||||| |||| |||| ||| || Sbjct 33 TATACACAAGAACAGTTGCGGTTTCGCTCTTTGTGTGGTTCCTACTGTTTTTCACTGTCT 92 Query 182 -TTGCTGAGCGCAATGACGGGACCTTCAGAGTTGGAC-TGAAAAAACTCAAGTTGGATTC 239 || || || | ||||| || || ||||||||||| | |||||||||| ||||||||| | Sbjct 93 CTT-CTCAGAGAAATGATGGAACATTCAGAGTTGG-CTTGAAAAAACTAAAGTTGGATCC 150 Query 240 GAAAAATCGGCTTGCAGCACGCGTCGAATCCAAGCAAGAAAAGCCCCTGA-G-------- 290 || || || |||||| ||||| | | |||||||||||| || || ||| | Sbjct 151 CAACAACCGACTTGCAACACGCTTTGGTTCCAAGCAAGAAGAGGCCTTGAGGTCCTCTTT 210 Query 291 AGC-T--T---AC-A-GA-CTTGG-A--GATTCTGGAGATGCTGATGTTGTTGTGCTTAA 338 | | | | || | | ||||| | ||||||||||||||||| |||| ||| || Sbjct 211 ACCTTCGTACAACAACAATCTTGGTAGTGATTCTGGAGATGCTGACATTGTCCCGCTCAA 270 Query 339 GAATTATC-TAGATGCTCAGTACTATGGTGAGATCGCCATTGGTACTCCACCTCAGAAGT 397 |||||| | | ||||||||||| ||||||||||| || || ||||||||||| ||||||| Sbjct 271 GAATTA-CTTGGATGCTCAGTATTATGGTGAGATTGCTATCGGTACTCCACCGCAGAAGT 329 Query 398 TCACTGTGGTTTTTGACACTGGGAGCTCTAACCTCTGGGTGCCATCATCAAAATGCTATT 457 ||||||| ||||||| || || ||||||||||| |||||||||||| |||||| | || Sbjct 330 TCACTGTCATTTTTGATACCGGAAGCTCTAACCTTTGGGTGCCATCAGGAAAATGTTTTT 389 Query 458 TCTCACTTG-CATGTCTCTTGCATCCCAAATACAAGTCGTCTCGTTCAAGCACATATGAG 516 |||| | || | ||| |||| ||| |||| | |||||| || || |||||||||||| || Sbjct 390 TCTCGC-TGTCTTGTTTCTTTCATGCCAAGTTCAAGTCCTCACGCTCAAGCACATATAAG 448 Query 517 AAGAATGGAAAAGC-TGCCGCAATTCATTACGGCACTGGAGCAAT-TGCTGGtttttttA 574 |||| ||||||| | ||||||||| ||||||||| | ||| | || | ||||||| |||| Sbjct 449 AAGAGTGGAAAA-CGTGCCGCAATCCATTACGGCTCAGGATCGATCT-CTGGTTTCTTTA 506 Query 575 GTAATGATGCTGTCACAGTTGGCGATTTAGTTGTCAAGGATCAGGAGTTTATCGAGGCAA 634 || |||||||||| || ||||| ||||| |||||||| |||||||||||||| ||||||| Sbjct 507 GTTATGATGCTGTTACGGTTGGTGATTTGGTTGTCAAAGATCAGGAGTTTATTGAGGCAA 566 Query 635 CCAAG-GAGCCTGGTATAACATTTGTTGTAGCTAAATTTGATGGTATCCTTGGTCTTGGA 693 || || ||||||||| ||||||| | || ||||| ||||||||| | |||||||||||| Sbjct 567 CC-AGTGAGCCTGGTTTAACATTCCTGGTGGCTAAGTTTGATGGTCTTCTTGGTCTTGGA 625 Query 694 TTCCAAGAGATCTCTGTTGGAAAAGCTGCTCCTGTTTGGTACAACATGCTCAAGCAAGGC 753 |||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct 626 TTCCAAGAGATCGCTGTTGGAAACGCTACTCCTGTTTGGTACAATATGCTCAAGCAAGGC 685 Query 754 CTTATCAAGGAG-CCGGTTTTTTCATTTTGGCTTAACCGTAATGCAGATGA-AGAAGAAG 811 |||||| | ||| ||||| ||||||||||||||||||||| | || | || ||||||| Sbjct 686 CTTATCGA-GAGACCGGTGTTTTCATTTTGGCTTAACCGTGACCCA-AAGAGTGAAGAAG 743 Query 812 GTGGTGAACTTGTATTTGGAGGTGTTGATCCAAATCATTTCAAGGGCA-AACATACATAT 870 | |||||| | |||||||||||||||||||| || |||||||| || | ||||||||| | Sbjct 744 GCGGTGAAATCGTATTTGGAGGTGTTGATCCTAAGCATTTCAAAGG-AGAACATACATTT 802 Query 871 GTTCCTGTGACACAAAAGGGCTACTGGCAGTTTGACATGGGTGATGTTCTTATTGGCGGT 930 |||||||||||||||| ||| ||||||||||| ||||||||||| ||||| |||| |||| Sbjct 803 GTTCCTGTGACACAAAGGGGTTACTGGCAGTTCGACATGGGTGAGGTTCTCATTGCCGGT 862 Query 931 GCA-CCCACTGGGT-TCTGTGAAAGTGGCTGTTCTGCGATAGCAGATTCTGGTACATCTT 988 | | | ||||| | | |||| |||||| ||||| ||||||||||||||||| || |||| Sbjct 863 G-ATTCTACTGGATAT-TGTGGAAGTGGTTGTTCGGCGATAGCAGATTCTGGAACGTCTT 920 Query 989 TGCTTGCCGGTCCAACGACTATAATCACCATGATAAACCATGCTATTGGAGCAGCTGGAG 1048 | ||||| || || ||| || | || ||||||||||| | ||||||||||| |||||| Sbjct 921 TACTTGCAGGGCCGACGGCTGTGATTGCCATGATAAACAAAGCTATTGGAGCCTCTGGAG 980 Query 1049 TTGTTAGCCAGCAGTGCAAGACTGTTGTGGATCAATACGGGCAGACCATTTTGGATTTAC 1108 |||||||||||||||||||||||||||| ||||| || || || |||||||||||||||| Sbjct 981 TTGTTAGCCAGCAGTGCAAGACTGTTGTTGATCAGTATGGACAAACCATTTTGGATTTAC 1040 Query 1109 TTTTGTCTGAGACCCAACCGAAGAAAATCTGCTCGCAGATTGGTCTGTGTACTTTTGATG 1168 ||||| ||||||| ||||| ||||| |||||||| || |||||||| || |||| |||| Sbjct 1041 TTTTGGCTGAGACTCAACCAAAGAAGATCTGCTCACAAATTGGTCTTTGCGCTTTCGATG 1100 Query 1169 GTACCCGTGGTGTCAGTATGGGCATTGAGTCGGTGGTGGACAAGGAAAACGCCAAATTGT 1228 | |||| || ||||||||||| ||||||||||||||||||||||||||| | | || | Sbjct 1101 GCACCCACGGGGTCAGTATGGGGATTGAGTCGGTGGTGGACAAGGAAAACACGAGATCAT 1160 Query 1229 CTAATGGTGTTGGAGATGCTGCG-TGTTCTGCATGTGAGATGGCTGTTGTGTGGATCCAG 1287 ||| |||| || ||||||| | | ||| |||||||||| ||||| ||||||||||| ||| Sbjct 1161 CTAGTGGTCTTCGAGATGCCG-GTTGTCCTGCATGTGAAATGGCGGTTGTGTGGATACAG 1219 Query 1288 AGCCAGTTGAGGCAAAACATGACTCAAGAGCGCATATTGAACTACGTCAACGAGCTATGT 1347 ||||| |||||||| ||||||||||||||||| ||| |||||||| | || ||| |||| Sbjct 1220 AGCCAATTGAGGCAGAACATGACTCAAGAGCGGATAGTGAACTACATTAATGAGATATGC 1279 Query 1348 GAACGCCTCCCCAG-CCCAATGGGAGAGTCTGCAGTTGACTG-TGCACAACTGTCAACAA 1405 || ||| | || || || ||| ||||||||||||||||| || | ||||||| ||||||| Sbjct 1280 GAGCGCATGCCTAGTCCAAAT-GGAGAGTCTGCAGTTGATTGCT-CACAACTCTCAACAA 1337 Query 1406 TGCCCACTGTTTCACTT-ACCATTGGAGGCAAAGTATTTGATCTTGCTCCAGAAGAGTAT 1464 |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1338 TGCCCACTGTTTCA-TTCACCATTGGAGGCAAAGTATTTGATCTTGCTCCAGAAGAGTAC 1396 Query 1465 GTTCTGAA-AGTTGGTGAGGGACCTGTGGCACAGTGCATCAGTGGTTTTATTGCTCTTGA 1523 || ||||| | |||| || ||||| |||||||| ||||| || || |||| || ||||| Sbjct 1397 GTACTGAAGA-TTGGGGAAGGACCAGTGGCACAATGCATTAGCGGCTTTACCGCACTTGA 1455 Query 1524 CGTTGCTCCACCTCGTGGACCTCTCTGGAT-CTTGGGAGATGTGTTCATGGGCAAATACC 1582 | | ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||| Sbjct 1456 CATCCCTCCACCTCGTGGACCTCTCTGGATACTTGG-AGATGTGTTTATGGGCAAATACC 1514 Query 1583 ACACCGTATTTGACTTTGGTAACGAACAGGTCGGGTTTGCAGA 1625 |||| || |||||||| || ||||| ||||| ||||| ||||| Sbjct 1515 ACACTGTCTTTGACTTCGGAAACGAGCAGGTTGGGTTCGCAGA 1557 > Ahg490093 jgi|Araly1|490093|fgenesh2_kg.6__3227__AT4G04460.1 Length=1705 Score = 379 bits (205), Expect = 4e-104 Identities = 683/907 (75%), Gaps = 60/907 (7%) Strand=Plus/Plus Query 317 ATGCTGATGTTGTTGTGCTTAAGAATTATCTAGATGCTCAGTACTATGGTGAGATCGCCA 376 |||| ||| | ||| ||| || |||||| | |||||||| ||||||||||| || ||| Sbjct 272 ATGCGGATATGGTTCCGCTGAAAAATTATTTGGATGCTCAATACTATGGTGACATTACCA 331 Query 377 TTGGTACTCCACCTCAGAAGTTCACTGTGGTTTTTGACACTGGGAGCTCTAACCTCTGGG 436 ||||||||||||||||||||||||||||| | ||||| ||||| ||||| || |||||| Sbjct 332 TTGGTACTCCACCTCAGAAGTTCACTGTGATCTTTGATACTGGTAGCTCCAATCTCTGGA 391 Query 437 TGCCATC-ATCAAAATGCTATTTCTCACTTGCATGTCTCTTGC-A-TCCCAAATACAAGT 493 | ||||| | | ||||| || || || |||| ||| | || | | ||| || |||||| Sbjct 392 TACCATCTA-CTAAATGTTACTTATCGGTTGCTTGT-TATTTCCACTCC-AAGTACAAGG 448 Query 494 C--GTCTCGTTCAA-GCACATATGAGAA-GAATGGAAAAGCTGCCG-CAATTCATTACGG 548 | | | || || | |||| |||| ||| || ||| | || | |||| | || || Sbjct 449 CTAGCCA-GT-CATCGT-CATAC-AGAAAGAACGGGAAACCCGC-GTCAATCCGCTATGG 503 Query 549 CACTGGAGCAATTGCTGGtttttttAGTAATGATGCTGTCACAGTTGGCGATTTAGTTGT 608 || || || ||| |||||| ||||| ||||||| ||| | |||||| ||| | ||||| Sbjct 504 GACAGGTGCTATTTCTGGTTACTTTAGCAATGATGATGTTAAAGTTGGTGATATCGTTGT 563 Query 609 CAAGGATCAGGAGTTTATCGAGGCAACCAAGGAGCCTGGTATAACATTTGTTG-TAGCTA 667 |||||| ||||| || || ||||| || | |||||||||||||| || ||| | || | Sbjct 564 CAAGGAGCAGGAATTCATAGAGGCTACTACTGAGCCTGGTATAACCTTC-TTGCTGGC-A 621 Query 668 AA-TTTGATGGTATCCTTGGTCTTGGATTCCAA-GAGATCTCTGTTGGAAAAGCTGCTCC 725 || |||||||||||||| ||| |||| || ||| ||||| ||||| ||||| | |||| Sbjct 622 AAGTTTGATGGTATCCTCGGT-TTGGGTTTCAAAGAGATTTCTGTCGGAAATTCAACTCC 680 Query 726 TGTTTGGTACAACATGCTC-AAGCAAGGCCTTA-TCAAGGAGCCGGTTTTTTCATTTTGG 783 |||||||| |||||| | || |||| || | ||||| || || ||||| || ||| Sbjct 681 GGTTTGGTATAACATGGTAGAAA-AAGGT-TTGGTTAAGGACCCAGTCTTTTCGTTCTGG 738 Query 784 CTTAACCGTAAT--GCAGATGAAGAAGAAGGTGGTGA-ACTTGTATTTGGAGGTGTTGAT 840 ||||||||||| ||| | || ||||||||||||| | |||| ||||| || || || Sbjct 739 CTTAACCGTAACCCGCA-A-GATCAAGAAGGTGGTGAGA-TTGTTTTTGGCGGAGTCGAC 795 Query 841 CCAAATCATTTCAAGGGCAAA-CATACATATGTTCCTGTGACACA-AAAGGGCTACTGGC 898 ||||| || ||||| || | | ||||| ||||||||||||||||| ||||| ||||||| Sbjct 796 CCAAAACACTTCAAAGG-AGAGCATACTTATGTTCCTGTGACACATAAAGGT-TACTGGC 853 Query 899 AGTTTGACATGGGTGATGTTCTTATTGGCGGTGCAC-CC-ACTGGGT-TCTGTG--AAAG 953 ||||||||||||||||||| | |||| | | ||| || || || | | |||| |||| Sbjct 854 AGTTTGACATGGGTGATGTCCAAATTG-CTG-GCAAACCTACAGGATAT-TGTGCTAAAG 910 Query 954 TGGCTGTTCTGCGATAGCAGATTCTGGTACATCTTTGCTTGCCGGTCCAACGACTATAAT 1013 | |||||||| || || ||||| || || ||| |||| |||||||| ||||| | || Sbjct 911 -GT-TGTTCTGCTATTGCTGATTCCGGAACTTCTCTGCTCACCGGTCCATCGACTGTCAT 968 Query 1014 CACCATGATAAACCATGCTATTGGAGCAGCT-GGAGTTGTTAGCCA-GCAGTGCAAGACT 1071 ||| ||||| || ||||| || |||||| | ||| | || |||| | | |||||| || Sbjct 969 CACGATGATCAATCATGCGATAGGAGCA-CAAGGAATCGTAAGCCGTGAA-TGCAAGGCT 1026 Query 1072 GTTGTGGATCAATACGGGCAGACCATTTTGGATT-TACTTTT-GTCTGAG-ACCCAACCG 1128 || |||||||| ||||| | || || ||| ||| | ||| | | || || | | ||| Sbjct 1027 GTGGTGGATCAGTACGGAAAAACAATGTTGAATTCT-CTTCTAG-CTCAGGAGG-ATCCG 1083 Query 1129 AAGAAAATCTGCTCGCAGATTGG--TCTGTGTACTTTTGATGGTACCCGTGGTGTCAGTA 1186 ||||| | ||||| || ||||| |||| | ||| ||||||||| | |||| |||| Sbjct 1084 AAGAAGGTATGCTCACAAATTGGAGTCTGCG--CTTATGATGGTACACACAGTGTGAGTA 1141 Query 1187 TGGGCAT 1193 ||| ||| Sbjct 1142 TGGACAT 1148 > Ahg920141 jgi|Araly1|920141|scaffold_101422.1 Length=1012 Score = 159 bits (86), Expect = 5e-38 Identities = 105/114 (92%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 618 GGAGTTTATCGAGGCAACCAAGGAGCCTGGTATAACATTTGTTGTAGCTAAATTTGATGG 677 ||| ||||||||||||||||||||| |||||||||| ||| |||||||||| |||||| | Sbjct 579 GGA-TTTATCGAGGCAACCAAGGAGTCTGGTATAACTTTTTTTGTAGCTAACTTTGAT-G 636 Query 678 TATCCTTGGTCTTGGATTCCAAGAGATCTCTGTTGGAAAAGCTGCTCCTGTTTG 731 |||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 637 TATCTTTGGTCTTGGATTCCAAGAGATCTCTGTTGGAAAGGCCGCTCCTGTTTG 690 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74047436280 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5