BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G12640.1 Length=1795 Score E Sequences producing significant alignments: (Bits) Value Ahg920110 jgi|Araly1|920110|scaffold_101391.1 2357 0.0 Ahg911026 jgi|Araly1|911026|Al_scaffold_0001_1280 1535 0.0 Ahg924677 jgi|Araly1|924677|scaffold_200238.1 1328 0.0 > Ahg920110 jgi|Araly1|920110|scaffold_101391.1 Length=1432 Score = 2357 bits (1276), Expect = 0.0 Identities = 1380/1432 (96%), Gaps = 0/1432 (0%) Strand=Plus/Plus Query 110 aaaaaaaaCGGGTTTTCGACACCATGGATATGAGTTCAATGGCTGGTTCAATCGGAGTTT 169 |||||||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||| Sbjct 1 AAAAAAAACGGGTTTTTGACACCATGGATATGAGTTCCATGGCTGCTTCGATCGGAGTTT 60 Query 170 CGGTAGCCGTACTCCGATTCCTCCTCTGTTTCGTTGCCACGATCCCTGTTTCATTCGCTT 229 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 61 CGGTCGCCGTTCTCCGATTCCTCCTCTGTTTCGTTGCCACGATCCCTGTTTCATCCGCTT 120 Query 230 GTCGAATCGTCCCGAGTAGACTCGGTAAACACTTGTATGCCGCTGCTTCAGGTGCTTTCC 289 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTCGAATCGTCCCGAGTCGACTCGGTAAACACTTGTATGCCGCTGCTTCAGGTGCTTTCC 180 Query 290 TCTCTTACCTCTCCTTTGGCTTCTCCTCCAACCTTCACTTCCTTGTTCCGATGACGATCG 349 ||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 181 TCTCTTATCTGTCCTTTGGATTCTCCTCCAACCTTCACTTCCTTGTTCCGATGACGATCG 240 Query 350 GATATGCTTCAATGGCGATTTATAGACCCAAGTGTGGAATCATCACTTTCTTCCTCGGTT 409 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GCTATGCTTCAATGGCGATTTATAGACCCAAGTGTGGAATCATCACTTTCTTCCTCGGTT 300 Query 410 TCGCTTATCTTATTGGCTGTCATGTGTTTTATATGAGTGGTGATGCGTGGAAAGAAGGAG 469 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 301 TCGGTTATCTTATTGGCTGTCATATGTTTTATATGAGTGGTGATGCGTGGAAAGAAGGAG 360 Query 470 GAATCGATTCTACTGGAGCGTTAATGGTGTTGACGCTGAAAGTCATCTCATGTTCAATGA 529 ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| | |||| Sbjct 361 GAATCGACTCTACTGGAGCGTTAATGGTGTTAACGCTGAAAGTTATCTCATGTGCGATGA 420 Query 530 ATTACAATGATGGGATGTTGAAGGAGGAAGGTCTACGTGAAGCTCAGAAGAAAAACAGAT 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 421 ATTACAATGATGGGATGTTGAAGGAGGAAGGTCTACGTGAAGCTCAGAAGAAAAACCGAT 480 Query 590 TGATTCAGATGCCGTCTTTGATTGAGTACTTTGGTTACTGCCTTTGTTGTGGTAGCCATT 649 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 481 TGATTCAGATGCCATCTTTGATTGAGTACTTTGGTTACTGCCTCTGTTGTGGTAGCCATT 540 Query 650 TTGCTGGTCCTGTTTATGAAATGAAAGATTATCTTGAATGGACCGAAGGGAAAGGGATTT 709 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TTGCTGGTCCTGTTTATGAAATGAAAGATTATCTTGAATGGACCGAAGGGAAAGGGATTT 600 Query 710 GGGATACTACTGAGAAAAGAAAGAAGCCATCGCCTTATGGAGCTACAATCCGAGCTATTT 769 |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 601 GGGATACTTCTGAAAAAAGAAAGCGGCCATCGCCTTATGGAGCTACAATCCGAGCTATTT 660 Query 770 TGCAAGCTGCGATTTGCATGGCTCTGTATCTCTATTTAGTGCCTCAATATCCGTTAACTC 829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TGCAAGCTGCGATTTGCATGGCTCTGTATCTCTATTTAGTGCCTCAATATCCGTTAACTC 720 Query 830 GGTTCACAGAACCAGTGTATCAAGAATGGGGATTCTTGAGAAAATTTAGTTACCAATACA 889 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 721 GGTTCACAGAACCCGTGTATCAAGAATGGGGTTTCTTGAGAAAATTTAGTTACCAATACA 780 Query 890 TGGCTGGATTCACGGCTCGTTGGAAGTATTACTTCATCTGGTCAATTTCAGAGGCTTCTA 949 |||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 781 TGGCGGGATTCACGGCCCGTTGGAAATATTACTTCATCTGGTCAATTTCAGAGGCTTCTA 840 Query 950 TTATCATCTCTGGTTTGGGTTTCAGTGGTTGGACTGATGATGCTTCACCAAAGCCCAAAT 1009 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 TTATCATCTCTGGTTTGGGTTTCAGTGGTTGGACTGATGATGCTTCACCAAAGCCCAAAT 900 Query 1010 GGGACCGTGCCAAGAACGTAGATATTCTCGGTGTTGAACTAGCTAAGAGCGCGGTTCAGA 1069 |||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct 901 GGGACCGTGCCAAGAACGTAGACATTCTCGGTGTCGAACTAGCTAAGAGCGCTGTTCAGA 960 Query 1070 TTCCACTTGTGTGGAACATACAAGTCAGCACGTGGCTCCGTCACTATGTGTATGAGAGAC 1129 |||| ||||| |||||||||||||||||||||||| | |||||||| ||||| || |||| Sbjct 961 TTCCGCTTGTATGGAACATACAAGTCAGCACGTGGTTGCGTCACTACGTGTACGAAAGAC 1020 Query 1130 TTGTGCAGAACGGAAAGAAAGCGGGTTTCTTCCAGTTACTAGCTACACAAACCGTCAGCG 1189 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct 1021 TTGTGCAGAACGGAAAGAAAGCGGGTTTCTTCCAGTTATTAGCTACACAAACCGTCAGTG 1080 Query 1190 CGGTTTGGCATGGACTGTATCCTGGATATATGATGTTCTTTGTTCAGTCAGCTTTGATGA 1249 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 CGGTTTGGCATGGACTATATCCTGGATATATGATGTTCTTTGTTCAGTCAGCTTTGATGA 1140 Query 1250 TCGCAGGCTCACGGGTTATTTACCGGTGGCAACAAGCGATCAGTCCGAAAATGGCAATGC 1309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 TCGCAGGCTCACGGGTTATTTACCGGTGGCAACAAGCGATCAGTCCGAAAATGGCAATGC 1200 Query 1310 TGAGAAATATAATGGTCTTCATCAACTTCCTTTACACTGTTTTGGTTCTCAACTACTCAG 1369 ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1201 TGAGAAATATACTGGTCTTCATCAACTTCCTTTACACCGTTTTGGTTCTCAACTACTCAG 1260 Query 1370 CCGTCGGTTTCATGGTGTTAAGCTTGCACGAAACACTTACCGCCTACGGAAGCGTATATT 1429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1261 CCGTCGGTTTCATGGTGTTAAGCTTGCACGAAACACTTACCGCCTACGGAAGCGTATATT 1320 Query 1430 ACATTGGAACAATCATACCTGTTGGATTGATTCTCCTCAGTTACGTTGTGCCTGCAAAAC 1489 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1321 ACATTGGAACAATCATACCTGTTGTATTGATTCTCCTCAGTTACGTTGTGCCTGCAAAAC 1380 Query 1490 CTTCAAGACCAAAACCGCGTAAAGAAGAATAAGCAGTTATCTTCTTCTCTTA 1541 |||||||||||||||| || ||||| |||||| ||||| ||||||||||||| Sbjct 1381 CTTCAAGACCAAAACCACGGAAAGAGGAATAAACAGTTCTCTTCTTCTCTTA 1432 > Ahg911026 jgi|Araly1|911026|Al_scaffold_0001_1280 Length=1344 Score = 1535 bits (831), Expect = 0.0 Identities = 908/946 (96%), Gaps = 1/946 (0%) Strand=Plus/Plus Query 577 AAG-AAAAACAGATTGATTCAGATGCCGTCTTTGATTGAGTACTTTGGTTACTGCCTTTG 635 ||| |||||| ||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 399 AAGAAAAAACCGATTGGTTCAGATGCCATCTTTGATTGAGTACTTTGGTTACTGCCTTTG 458 Query 636 TTGTGGTAGCCATTTTGCTGGTCCTGTTTATGAAATGAAAGATTATCTTGAATGGACCGA 695 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 459 TTGCGGTAGCCATTTTGCTGGTCCTGTTTATGAAATGAAAGATTATCTCCAATGGACCGA 518 Query 696 AGGGAAAGGGATTTGGGATACTACTGAGAAAAGAAAGAAGCCATCGCCTTATGGAGCTAC 755 ||| |||||||||||||||||| | || ||||||||| |||||||||||| ||||||||| Sbjct 519 AGGAAAAGGGATTTGGGATACTTCAGAAAAAAGAAAGCAGCCATCGCCTTTTGGAGCTAC 578 Query 756 AATCCGAGCTATTTTGCAAGCTGCGATTTGCATGGCTCTGTATCTCTATTTAGTGCCTCA 815 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 579 AATCCGAGCTATTTTGCAAGCTGCGATCTGCATGGCTCTGTATCTCTATTTAGTGCCTCA 638 Query 816 ATATCCGTTAACTCGGTTCACAGAACCAGTGTATCAAGAATGGGGATTCTTGAGAAAATT 875 ||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 639 GTATCCGTTAACCCGGTTCACTGAACCCGTGTACCAAGAATGGGGATTCTTGAGAAAATT 698 Query 876 TAGTTACCAATACATGGCTGGATTCACGGCTCGTTGGAAGTATTACTTCATCTGGTCAAT 935 |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 699 TAGTTATCAATACATGGCCGGATTCACGGCCCGTTGGAAGTATTACTTCATCTGGTCAAT 758 Query 936 TTCAGAGGCTTCTATTATCATCTCTGGTTTGGGTTTCAGTGGTTGGACTGATGATGCTTC 995 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 759 TTCAGAGGCTTCTATTATCATCTCTGGTTTGGGTTTCAGTGGTTGGACTGATGATGCTTC 818 Query 996 ACCAAAGCCCAAATGGGACCGTGCCAAGAACGTAGATATTCTCGGTGTTGAACTAGCTAA 1055 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 819 ACCAAAGCCTAAATGGGACCGTGCCAAGAACGTAGACATTCTCGGTGTTGAACTAGCTAA 878 Query 1056 GAGCGCGGTTCAGATTCCACTTGTGTGGAACATACAAGTCAGCACGTGGCTCCGTCACTA 1115 ||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||| Sbjct 879 GAGCGCGGTTCAGATTCCACTAGTATGGAACATACAAGTCAGCACATGGCTCCGTCACTA 938 Query 1116 TGTGTATGAGAGACTTGTGCAGAACGGAAAGAAAGCGGGTTTCTTCCAGTTACTAGCTAC 1175 |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 939 CGTGTATGAAAGACTTGTGCAGAACGGAAAGAAAGCGGGTTTCTTCCAGTTATTAGCTAC 998 Query 1176 ACAAACCGTCAGCGCGGTTTGGCATGGACTGTATCCTGGATATATGATGTTCTTTGTTCA 1235 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 999 ACAAACCGTCAGTGCGGTTTGGCATGGACTATATCCTGGATATATGATGTTCTTTGTTCA 1058 Query 1236 GTCAGCTTTGATGATCGCAGGCTCACGGGTTATTTACCGGTGGCAACAAGCGATCAGTCC 1295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1059 GTCAGCTTTGATGATCGCAGGCTCACGGGTTATTTACCGGTGGCAACAAGCGATCAGTCC 1118 Query 1296 GAAAATGGCAATGCTGAGAAATATAATGGTCTTCATCAACTTCCTTTACACTGTTTTGGT 1355 ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 1119 GAAAATGGCAATGCTGAGAAATATACTGGTCTTCATCAACTTCCTTTACACCGTTTTGGT 1178 Query 1356 TCTCAACTACTCAGCCGTCGGTTTCATGGTGTTAAGCTTGCACGAAACACTTACCGCCTA 1415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1179 TCTCAACTACTCAGCCGTCGGTTTCATGGTGTTAAGCTTGCACGAAACACTTACCGCCTA 1238 Query 1416 CGGAAGCGTATATTACATTGGAACAATCATACCTGTTGGATTGATTCTCCTCAGTTACGT 1475 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1239 CGGAAGCGTATATTACATTGGAACAATCATACCTGTTGTATTGATTCTCCTCAGTTACGT 1298 Query 1476 TGTGCCTGCAAAACCTTCAAGACCAAAACCGCGTAAAGAAGAATAA 1521 ||| ||||||||||| |||||||||||||||||||| ||||||||| Sbjct 1299 TGTTCCTGCAAAACCCTCAAGACCAAAACCGCGTAAGGAAGAATAA 1344 Score = 569 bits (308), Expect = 2e-161 Identities = 369/399 (92%), Gaps = 2/399 (1%) Strand=Plus/Plus Query 148 ATGGCTGGTTCAATCGGAGTTTCGGTAGCCGTACTCCGATTCCTCCTCTGTTTCGTTGCC 207 ||||||| ||| |||||||||||||| ||||| ||||| ||||||||||||||||| ||| Sbjct 1 ATGGCTGCTTCGATCGGAGTTTCGGTCGCCGTTCTCCGTTTCCTCCTCTGTTTCGTCGCC 60 Query 208 ACGATCCCTGTTTCATTCGCTTGTCGAATCGTCCCGAGTAGACTCGGTAAACACTTGTAT 267 ||||| |||||||| ||||| || |||||||||||||| |||||||||||||||||||| Sbjct 61 ACGATTCCTGTTTCTTTCGCCTGGAGAATCGTCCCGAGTCGACTCGGTAAACACTTGTAT 120 Query 268 GCCGCTGCTTCAGGTGCTT-TCCTCTCTTACCTCTCCTTTGGCTTCTCCTCCAACCTTCA 326 |||||||||||||||| || | ||||||||||| |||||||| |||||||||||||| || Sbjct 121 GCCGCTGCTTCAGGTG-TTCTACTCTCTTACCTTTCCTTTGGATTCTCCTCCAACCTCCA 179 Query 327 CTTCCTTGTTCCGATGACGATCGGATATGCTTCAATGGCGATTTATAGACCCAAGTGTGG 386 |||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 180 CTTCCTCGTTCCGATGACGATCGGTTATGCTTCAATGGCGATTTATCGACCCAAGTGTGG 239 Query 387 AATCATCACTTTCTTCCTCGGTTTCGCTTATCTTATTGGCTGTCATGTGTTTTATATGAG 446 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 240 AATCATCACTTTCTTCCTCGGTTTCGCTTATCTCATTGGCTGTCATGTGTTTTATATGAG 299 Query 447 TGGTGATGCGTGGAAAGAAGGAGGAATCGATTCTACTGGAGCGTTAATGGTGTTGACGCT 506 ||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| Sbjct 300 TGGAGATGCGTGGAAAGAAGGAGGAATTGATGCTACTGGAGCGTTAATGGTGTTAACGCT 359 Query 507 GAAAGTCATCTCATGTTCAATGAATTACAATGATGGGAT 545 |||||| ||||| ||| | |||||||||||||||||||| Sbjct 360 GAAAGTTATCTCGTGTGCCATGAATTACAATGATGGGAT 398 > Ahg924677 jgi|Araly1|924677|scaffold_200238.1 Length=1438 Score = 1328 bits (719), Expect = 0.0 Identities = 1173/1391 (84%), Gaps = 36/1391 (3%) Strand=Plus/Plus Query 149 TGGCTGGTTCAATCGGAGTTTCGGTAGCCGTACTCCGATTCCTCCTCTGTTTCGTTGCCA 208 ||||| ||||||| | || || || ||||| ||||| ||||||||||||||||| || | Sbjct 46 TGGCTTCTTCAATCTGCGTCTCCGTCGCCGTTCTCCGTTTCCTCCTCTGTTTCGTCGCAA 105 Query 209 CGATCCCTGTTTCATTCGCT-TGTCGAATCGTCCCGAGTAGACTCGGTAAACACTTGTA- 266 |||| || | || ||| | || ||| ||||||||||| |||||||||||||| || Sbjct 106 CGATACCAATCTCGTTC-TTATGGCGATTCGTCCCGAGTCGACTCGGTAAACACACCTAC 164 Query 267 TGCCGCTGCTTCAGGTGCTTTCCTCTCTTACCTCTCCTTTGGCTTCTCCTCCAACCTTCA 326 | | |||||||| || |||||||||||||| |||||||||||||||||||| || ||||| Sbjct 165 T-CAGCTGCTTCTGGAGCTTTCCTCTCTTATCTCTCCTTTGGCTTCTCCTCAAATCTTCA 223 Query 327 CTTCCTTGTTCCGATGACGATCGGATATGCTTCAATGGCGATTTATAGACCCAAGTGTGG 386 ||||||||| || |||||||| || || |||||||||||||||||| ||||| || ||| Sbjct 224 CTTCCTTGTCCCAATGACGATTGGTTACGCTTCAATGGCGATTTATCGACCCTTGTCTGG 283 Query 387 AATCATCACTTTCTTCCTCGGTTTCGCTTATCTTATTGGCTGTCATGTGTTTTATATGAG 446 | | || ||||||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct 284 ATTGATTACTTTCTTCCTGGGCTTCGCTTATCTCATTGGCTGTCATGTGTTTTATATGAG 343 Query 447 TGGTGATGCGTGGAAAGAAGGAGGAATCGATTCTACTGGAGCGTTAATGGTGTTGACGCT 506 ||| ||||| ||||||||||||||||| || ||||||||||| || |||||||| || || Sbjct 344 TGGAGATGCTTGGAAAGAAGGAGGAATTGACTCTACTGGAGCTTTGATGGTGTTAACACT 403 Query 507 GAAAGTCATCTCATGTTCAATGAATTACAATGATGGGATGTTGAAGGAGGAAGGTCTACG 566 |||||| || || ||||| || |||||||| ||||| |||||||| || |||||||| || Sbjct 404 GAAAGTGATTTCGTGTTCGATAAATTACAACGATGGAATGTTGAAAGAAGAAGGTCTCCG 463 Query 567 TGAAGCTCAGAAGAAAAACAGATTGATTCAGATGCCGTCTTTGATTGAGTACTTTGGTTA 626 ||| ||||||||||| ||| | |||||||||| ||| ||| | ||||||||||||||||| Sbjct 464 TGAGGCTCAGAAGAAGAACCGTTTGATTCAGAGGCCTTCTCTAATTGAGTACTTTGGTTA 523 Query 627 CTGCCTTTGTTGTGGTAGCCATTTTGCTGGTCCTGTTTAT-GAAATGAAAGATTATCTTG 685 |||||||||||||| |||||||| ||||| || |||| | ||||||||||||||||||| Sbjct 524 TTGCCTTTGTTGTGGAAGCCATTTCGCTGGCCCGGTTT-TCGAAATGAAAGATTATCTTG 582 Query 686 AATGGACCGAAGGGAAAGGGATTTGGGATACTACTGAGAAAA-GAAAGAAG-CCATCGCC 743 ||||||| |||| |||||| ||||||||| | ||| |||| ||||| | |||||||| Sbjct 583 AATGGACTGAAGAGAAAGGAATTTGGGATGTTTCTG-TAAAAGGAAAG-CGACCATCGCC 640 Query 744 TTATGGAGCTACAATCCGAGCTAT-TTTGCAAGCTGCGATTTGCATGGCTCTGTATCTCT 802 ||||||||| || || |||||||| ||| |||||||||||||| |||||||||||||||| Sbjct 641 TTATGGAGCAACGATTCGAGCTATATTT-CAAGCTGCGATTTGTATGGCTCTGTATCTCT 699 Query 803 ATTTAGTGCCTCAATATCCGTTAACTCGGTTCACAGAACCAGTGTATCAAGAATGGGGAT 862 ||||||| ||||| | ||||||||| |||||||| |||||||| || ||||||||||||| Sbjct 700 ATTTAGTACCTCAGTTTCCGTTAACCCGGTTCACTGAACCAGTCTACCAAGAATGGGGAT 759 Query 863 TCTTGAGAA-A-ATTTAGTTACCAATACATGGCTGGATTCACGGCTCGTTGGAAGTATTA 920 || || ||| | |||| |||||||||||||||| || ||||||||||||||||||||||| Sbjct 760 TC-TG-GAAGAGATTTGGTTACCAATACATGGCGGGTTTCACGGCTCGTTGGAAGTATTA 817 Query 921 CTTCATCTGGTCAATTTCAGAGGCTTCTATTATCATCTCTGGTTTGGGTTTCAGTGGTTG 980 |||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 818 CTTCATATGGTCTATTTCAGAGGCTTCTATTATTATCTCTGGTTTGGGTTTCAGTGGTTG 877 Query 981 GACTGATGATGCTTCAC-CAAAGCCCAAATGGGACCGTGCCAAGAACGTAGATATTCTCG 1039 ||||||||| || || ||||| | |||||||||||||| || || || |||||| | | Sbjct 878 GACTGATGAAACT-CAAACAAAGGCGAAATGGGACCGTGCGAAAAATGTCGATATTTTGG 936 Query 1040 GTGTTGAACTAGCTAAGAGCGCGGTTCAGATTCCACTTGTGTGGAACATACAAGTCAGCA 1099 | ||||| || || ||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct 937 GGGTTGAGCTTGCCAAGAGTGCGGTTCAGATTCCGCTTTTCTGGAACATACAAGTCAGCA 996 Query 1100 CGTGGCTCCGTCACTATGTGTATGAGAGACTTGTGCAGAACGGAAAGAAAGCGGGTTTCT 1159 | |||||||||||||| || ||||||||| ||||| || ||| |||||||| ||||||| Sbjct 997 CATGGCTCCGTCACTACGTATATGAGAGAATTGTGAAGCCCGGGAAGAAAGCAGGTTTCT 1056 Query 1160 TCCAGTTACTAGCTACACAAACCGTCAGCGCGGTTTGGCATGGACTGTATCCTGGATATA 1219 |||| || |||||||| ||||||||||| || || ||||||||||||||||||||||| | Sbjct 1057 TCCAATTGCTAGCTACGCAAACCGTCAGTGCTGTCTGGCATGGACTGTATCCTGGATACA 1116 Query 1220 TGATGTTCTTTGTTCAGTCAGCTTTGATGATCGCA-GGCTC-ACGGGTTATTTACCGGTG 1277 | || |||||||| || ||||| |||||||||| | || || | | | |||||||| || Sbjct 1117 TTATATTCTTTGTGCAATCAGCATTGATGATCG-ATGGTTCGAAAGCT-ATTTACCGATG 1174 Query 1278 GCAACAAGCGATCAGTCCGAAAATGGCAATGCTGAGAAATATAATGGT-CTTCATCAACT 1336 ||||||||| ||| ||||||||||||||||||||||||| | |||| || |||||| | Sbjct 1175 GCAACAAGCAATCCCTCCGAAAATGGCAATGCTGAGAAATGTTTTGGTTCT-CATCAATT 1233 Query 1337 TCCTTTACACTGTTTTGGTTCTCAACTACTCAGCCGTCGGTTTCATGGTGTTAAGCTTGC 1396 |||| ||||| || ||||||||||| |||||| |||| ||||||||||| |||||||||| Sbjct 1234 TCCTCTACACAGTATTGGTTCTCAATTACTCATCCGTTGGTTTCATGGTTTTAAGCTTGC 1293 Query 1397 ACGAAACACTTACCGCCTACG-GAAGCGTATATTACATTGGAACAATCATACCTGTTGGA 1455 | |||||| | ||||| | || | |||||||||||||||||| | |||||| | | Sbjct 1294 ATGAAACAATCGTCGCCTTCAAGA-GTGTATATTACATTGGAACAGTTATACCTATCGC- 1351 Query 1456 T-TGATTCTCCTCAGTTACGTT-GTGCCTGCAAAACCT-TCAAGACCAAA-ACCGCGTAA 1511 | || |||| ||||| ||| || || |||| || ||| | | ||||||| || | | || Sbjct 1352 TGTGCTTCTTCTCAGCTAC-TTAGTTCCTGTGAAGCCTGTTA-GACCAAAGAC-GAG-AA 1407 Query 1512 AGAA-GAATAA 1521 || | |||||| Sbjct 1408 AGGACGAATAA 1418 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67381643405 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5