BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G12800.1 Length=2673 Score E Sequences producing significant alignments: (Bits) Value Ahg920143 jgi|Araly1|920143|scaffold_101424.1 3542 0.0 Ahg911052 jgi|Araly1|911052|Al_scaffold_0001_1306 1312 0.0 Ahg911029 jgi|Araly1|911029|Al_scaffold_0001_1283 867 0.0 Ahg920172 jgi|Araly1|920172|scaffold_101453.1 135 1e-30 > Ahg920143 jgi|Araly1|920143|scaffold_101424.1 Length=2347 Score = 3542 bits (1918), Expect = 0.0 Identities = 2215/2353 (94%), Gaps = 41/2353 (2%) Strand=Plus/Plus Query 123 TCTTTCGGCTTAATCGGAAAATGGACGTTCTCGCCTTATCCTCTTCCGCTTCCGCCGCCG 182 ||||| |||||||||||||||||||||| || ||||||||||||||||||| ||| Sbjct 1 TCTTTGGGCTTAATCGGAAAATGGACGTGCTTGCCTTATCCTCTTCCGCTT------CCG 54 Query 183 CACCCTCCGCTTCTCTCGCCGGAAAATTCCTGTCGTTTCCTTCTAGGGTTAGAGTGAGAA 242 |||||||||| |||||||| |||| || |||| |||||||||||| |||||||| Sbjct 55 ------CCGCTTCTCTAGCCGGAAACTTCCCGTTGTTTTCTTCTAGGGTTAAAGTGAGAA 108 Query 243 GAAACCGAGAGAATTTGTTAGCTAAACAGAAGAAGTTTTTAGTTTCTGCTTCGAAAAGAG 302 ||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 109 GAAACCGGGAGAATTTATTAGCTAAACAGAAGAAGTTTTTAGTTTCAGCTTCGAAAAGAG 168 Query 303 AAGAGCCTAAGCTCAACGAATGGGATCAAATGGAGCTCAACTTTGGCCGTTTACTCGGCG 362 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 169 AAGAGCCTAAGCTCAATGAATGGGATCAAATGGAGCTCAACTTTGGCCGTTTACTAGGCG 228 Query 363 AAGACCCGAAATTGACTTTGGCTAAGATAGTAGCTAGAAAAGTGGATCCAGAAGCTTCTT 422 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct 229 AAGACCCGAAATTGACTTTGGCTAAGATAGTGGCTAGAAAAGTGAATCCAGAAGCTTCTT 288 Query 423 TTATTGACATTGAGAAATCTTTCTACAAGAACAAAGGTAAAATTCCTGAAGTTGAAGAGA 482 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 289 TTATTGAAATTGAGAAATCTTTCTACAAGAACAAAGGTAAAATTCCTGAAGTTGAAGAGA 348 Query 483 TTCCATTGGATTGGTCAAAGGATAACAAGAAGAAATCTACTAGTTCACTGGATGGATTGA 542 ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct 349 TTCCATTGGATTGGTCAAACGATAAGAAGAAGAAATCTACTAGTTCACTGGATGGGTTGA 408 Query 543 AATTGGTAAAGCCTGTTCTGAAAGATGGAGTCAAGTTCGAAAGGCCAGTGATGAAGAAGC 602 |||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||| Sbjct 409 AATTGGTAAAGCCTGTTCCGAAAGACGGAGTCAAGTTCGAAAAGCCAGTGATGAAGAAGC 468 Query 603 CAAGCCCTGTTTTGAAGAAGCCATTGGTGGAGGCTGTTGCTGCTCCAAAGGTGCAGAGAT 662 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 469 CAAGCCCTGTTTTGAAGAAGCCATTGGTGGAGGC---TGCTGCTCCAAAGGTGCAGAGAT 525 Query 663 TGCCTAATGTTATATTGAGAAAGCCGAGTTCGTTTTATACTAGTAATGGTGATGATGAGG 722 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 526 TGCCTAATGTTATATTGAGAAAGCCGAGTTCGTTTTATACTAGTAATAATGATGATGAGG 585 Query 723 AGTCTAAGTTGCGGTTGAAACCGAATCTGACATTGAAAATGAGAAATGAGAGGGAAAATG 782 |||||||||||||||||||||||||| ||||| |||||||||| |||||||| ||||||| Sbjct 586 AGTCTAAGTTGCGGTTGAAACCGAATTTGACACTGAAAATGAGGAATGAGAGAGAAAATG 645 Query 783 AGAGGTTTAGTGATATGACATTGTTGAGAAAACCGGAACCAGTGAGCGTAGTTGCAGAAG 842 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 646 AGAGGTTTAGTGATATGACATTGTTGAGAAAACCGGAACCAGTGAGCGTAGATGCAAAAG 705 Query 843 AGG-AAG-AC--AAGCCT---CTT-T--CTGATGATTTAACTATGGAGGAAGGAGAACAG 892 ||| ||| | ||| | || | |||||| ||||||||||||||||||| ||| Sbjct 706 AGGAAAGTTCTGAAG-ATAAGGTTATCCCTGATGGGTTAACTATGGAGGAAGGAGGACAA 764 Query 893 GAAGGTGGAACATATTCACAGTATACTCTTTTGGAGAAGCCAGAAGCGAGGCTC-CAGCC 951 |||| || |||||||||| |||||||||||||||||||||||||||| ||| || |||| Sbjct 765 GAAGATGTAACATATTCAGAGTATACTCTTTTGGAGAAGCCAGAAGCAAGG-TCTAAGCC 823 Query 952 TGTCAATGTAGAAGAGGAAGTTGGAGATAGCGGAGGAGTGGAATCATCTGAGATAGTAAA 1011 || || || |||||||||||||||||||||||| |||||||||||| ||||||| ||| Sbjct 824 TGAGAACATAAAAGAGGAAGTTGGAGATAGCGGAGCAGTGGAATCATCAGAGATAGAAAA 883 Query 1012 CAACTCAATTCAGAAGCCAGAAGCAAGGCCAGAGCTTGAGAACATAGAAAAGGAA-GTTG 1070 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||| Sbjct 884 CAACTCAATTCAGAAGCCAGAAGCAAGGCCAGAGCCTGAGAACGTAGAAAA-GAATGTTG 942 Query 1071 CAGATAGCGGAGTTTTGGAATCATCGGAGATAGAAAATAATTCAATTCCAACTGAAATGC 1130 ||||||||||| | |||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 943 GAGATAGCGGAGCTATGGAATCATCTGAGATAGAAAATAACTCAATTCCAACTGAAATGC 1002 Query 1131 AGCTCAA-TAGCGAGATGT-C-C----T-CT--GAGGAGAAAACTATTAACAGTGATCCA 1180 |||| || | || |||||| | | | || ||||||| ||| ||||||||||||||| Sbjct 1003 AGCTTAACT-GCAAGATGTCCTCGGGATCCTCCGAGGAGAGAACCATTAACAGTGATCCA 1061 Query 1181 CTCGAGAGAATTCCTTCGAAACCAATTTCTCAAACCATCGTCGAAGCTTCTTTACAAGGG 1240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1062 CTCGAGAGAATTCCTTCGAAACCAATTTCTCAAACCATCGTAGAAGCTTCTTTACAAGGG 1121 Query 1241 AAACCACAAAGATTAGACCCGTCTTCCGCTGAGCCATCAGTTCCGAACATAGGAAAACCG 1300 ||||||||||||||||||||||||||||| |||||||||||| | |||| |||| ||||| Sbjct 1122 AAACCACAAAGATTAGACCCGTCTTCCGCGGAGCCATCAGTTTCAAACAGAGGACAACCG 1181 Query 1301 TCAGTCGTGAACCATGAAGGCCGTCAGGTCTCTGTTGAGCTCAAGGGCCCTCCTACCAGA 1360 | | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1182 TTAATCGTGAACCATGAAGGTCGTCAGGTCTCTGTTGAGCTCAAGGGCCCTCCTACCAGA 1241 Query 1361 TCGTCCTTGGAGGAAAATGATTGGAATAAGGCAGAGTCTCTAGTTAAAACAGAATTACGA 1420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1242 TCGTCCTTGGAGGAAAATGATTGGAATGAGGCAGAGTCTCTAGTTAAAACAGAATTACGA 1301 Query 1421 GCAGATGTTGAGCTAATAAGTTCAAGCACTAGAGGATTTGCTGTTTCCTATGGATCTTTG 1480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1302 GCAGATGTTGAGCTAATAAGTTCAAGCACTAGAGGATTTGCTGTTTCCTATGGATCTTTG 1361 Query 1481 ATTGGATTTTTACCCTACCGGAACCTTGCAGCAAAATGGAAGTTTCTCGCATTTGAATCA 1540 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 1362 ATCGGATTTTTACCCTACCGGAACCTAGCAGCAAAATGGAAATTTCTCGCATTTGAATCA 1421 Query 1541 TGGTTAAGAAGAAAAGGTGTAGATCCATCACCGTATCGACAAAACCTTGGGGTAATTGGA 1600 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 1422 TGGTTAAGAAGAAAAGGTGTAGATCCATCACTGTATCGACAAAACCTTGGGGTAATCGGA 1481 Query 1601 GGTCAAGATGTCACGAGTAAATCTCCATCTCCAGATTCAAGCTTAGATTCTGAAGTCGCT 1660 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1482 GGTCAAGATGTCACAAGTAAAGCTCCATCTCCAGATTCAAGCTTAGATTCTGAAGTCGCT 1541 Query 1661 ACAACGATCAACGGAGAAGTTTCTTCTGATATGAAGCTGGAAGATCTTCTTATGGTATAT 1720 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1542 ACATCGATCAACGGAGAAGTTTCTTCTGATATGAAGCTGGAAGATCTTCTTATGGTATAT 1601 Query 1721 GACAGAGAGAAGCAGAAGTTCCTGTCATCTTTTGTTGGTCAGAAAATCAAAGTGAATGTT 1780 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1602 GACAGAGAAAAGCAGAAGTTCCTGTCATCTTTTGTTGGCCAGAAAATCAAAGTGAATGTT 1661 Query 1781 GTTATGGCAAATCGAAATTCAAGGAAGCTTATATTTTCAATGAGGCCGAGAGAAAATGAA 1840 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 1662 GTTATGGCTAATCGAAACTCAAGGAAGCTTATATTTTCGATGAGGCCGAGAGAAAATGAA 1721 Query 1841 GAGGAAGTTGAGAAAAAACGAACTCTTATGGCTAAGCTTCGTGTTGGGGATGTTGTGAAA 1900 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1722 GAGGAAGTTGAGAAAAAACGAAATCTTATGGCTAAGCTTCGTGTTGGGGATGTTGTGAAA 1781 Query 1901 TGCTGCATCAAGAAAATTACCTATTTTGGTATTTTCTGTGAGCTAGAAGGTGTCCCTGCA 1960 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1782 TGCTGCATCAAGAAAATTACCTATTTTGGTATTTTTTGTGAGCTAGAAGGTGTCCCTGCA 1841 Query 1961 TTGGTTCACCAGTCAGAAGTTTCATGGGATGCAACTTTAGACCCTGCTTCATATTTCAAG 2020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1842 TTGGTTCACCAGTCAGAAGTTTCATGGGATGCAACTTTAGACCCTGCTTCATATTTCAAG 1901 Query 2021 ATTGGTCAGATTGTGGAAGCGAAAGTGCACCAGCTAGATTTTGCTCTTGAACGTATCTTC 2080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1902 ATTGGTCAGATTGTGGAAGCGAAAGTGCACCAGCTAGATTTTGCTCTTGAACGTATCTTC 1961 Query 2081 TTGTCATTAAAAGAAATTACGCCTGATCCTCTTACTGAAGCTTTAGAATCTGTAGTTGGT 2140 ||||| |||||||||| |||||||||||||| || ||||| |||||||||||||||||| Sbjct 1962 TTGTCGCTAAAAGAAATCACGCCTGATCCTCTAACCGAAGCCTTAGAATCTGTAGTTGGT 2021 Query 2141 GGTGATAATGATCAGTTGGGGGGACGATTACAAGCAGCAGAGCTCGACGCTGAGTGGCCT 2200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2022 GGTGATAATGATCAGTTGGGGGGACGATTACAAGCAGCAGAGCTCGACGCTGAGTGGCCT 2081 Query 2201 GACGTGGAATCTCTGATCAAAGAGCTGGAAATGGTTGAAGGAATCCAATCAGTCTCAAAA 2260 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 2082 GACGTGGAATCTCTGATCAAAGAGCTGGAAATGGTTGAAGGAATTCAATCAGTTTCAAAA 2141 Query 2261 AGTCGTTTCTTCTTGAGTCCGGGTCTTGCTCCAACGTTTCAGGTTTACATGGCTCCAATG 2320 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 2142 AGTCGTTTCTTCTTGAGCCCGGGTCTTGCTCCAACGTTTCAGGTTTACATGGCTCCAATG 2201 Query 2321 TTTGAGAACCAATACAAACTGCTTGCTCGAGCTGGAAACAGAGTACAAGAGCTTATTGTT 2380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2202 TTTGAGAACCAATACAAACTGCTTGCTCGAGCTGGAAACAGAGTACAAGAGCTTATTGTT 2261 Query 2381 GAAGCATCCTTGAGCAAAGAAGAGATGAAATCTACAATCATGTCTTGCACCAACAGAGTA 2440 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2262 GAAGCATCGTTGAGCAAAGAAGAGATGAAATCTACAATCATGTCTTGCACCAACAGAGTA 2321 Query 2441 GAATGAGAATATT 2453 ||||||||||||| Sbjct 2322 GAATGAGAATATT 2334 > Ahg911052 jgi|Araly1|911052|Al_scaffold_0001_1306 Length=846 Score = 1312 bits (710), Expect = 0.0 Identities = 813/860 (95%), Gaps = 18/860 (2%) Strand=Plus/Plus Query 1086 TGGAATCATCGGAGATAGAAAATAATTCAATTCCAACTGAAATGCAGCTCAATAGCGAGA 1145 |||||||||| |||||||||||||| ||||||||||| || || | || | || || Sbjct 2 TGGAATCATCTGAGATAGAAAATAACTCAATTCCAAC-GAGAT---G-TC-CT--CGGGA 53 Query 1146 TGTCCTCTGAGGAGAAAACTATTAACAGTGATCCACTCGAGAGAATTCCTTCGAAACCAA 1205 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 54 --TCCTCTGAGGAGAAAACCGTTAACAGTGATCCACTCGAGAGAATTCCTTCGAAACCAA 111 Query 1206 -TTTCTCAAACCATCGTCGAAGCTTCTTTACAAGGGAAACCACAAAGATTAGACCCGTCT 1264 |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||| Sbjct 112 TTTTCTCAAACCATCGTAGAAGCTTCTTTACAAGGGAAACCAC--A-ATTAGACCCGTCT 168 Query 1265 TCCGCT-GAGCCATCAGTTCCGAA-CATAGGAAAACCGTCAGTCGTGAACCATGAAGGCC 1322 |||| | |||||||||||| | || || |||| |||||| | |||||||| ||||||||| Sbjct 169 TCCG-TGGAGCCATCAGTTTC-AACCAAAGGACAACCGTTAATCGTGAACTATGAAGGCC 226 Query 1323 GTCAGGTCTCTGTTGAGCTCAAGGGCCCTCCTACCAGATCGTCCTTGGAGGAAAATGATT 1382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 227 GTCAGGTCTCTGTTGAGCTCAAGGGCCCTCCTACCAGATCGTCCTTGGAGGAAAATGATT 286 Query 1383 GGAATAAGGCAGAGTCTCTAGTTAAAACAGAATTACGAGCAGATGTTGAGCTAATAAGTT 1442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 287 GGAATAAGGCAGAGTCTCTAGTTAAAACAGAATTACGAGCAGATGTTGAGCTAATAAGTT 346 Query 1443 CAAGCACTAGAGGATTTGCTGTTTCCTATGGATCTTTGATTGGATTTTTACCCTACCGGA 1502 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 347 CAAGCACTAGAGGATTTGCTGTTTCCTATGGATCTTTGATCGGATTTTTACCCTACCGGA 406 Query 1503 ACCTTGCAGCAAAATGGAAGTTTCTCGCATTTGAATCATGGTTAAGAAGAAAAGGTGTAG 1562 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 407 ACCTAGCAGCAAAATGGAAATTTCTCGCATTTGAATCATGGTTAAGAAGAAAAGGTGTAG 466 Query 1563 ATCCATCACCGTATCGACAAAACCTTGGGGTAATTGGAGGTCAAGATGTCACGAGTAAAT 1622 ||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 467 ATCCATCACTGTATCGACAAAACCTTGGGGTAATCGGAGGTCAAGATGTCACAAGTAAAG 526 Query 1623 CTCCATCTCCAGATTCAAGCTTAGATTCTGAAGTCGCTACAACGATCAACGGAGAAGTTT 1682 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 527 CTCCATCTCCAGATTCAAGCTTAGATTCTGAAGTCGCTACATCGATCAACGGAGAAGTTT 586 Query 1683 CTTCTGATATGAAGCTGGAAGATCTTCTTATGGTATATGACAGAGAGAAGCAGAAGTTCC 1742 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 587 CTTCTGATATGAAGCTGGAAGATCTTCTTATGGTATATGACAGAGAAAAGCAGAAGTTCC 646 Query 1743 TGTCATCTTTTGTTGGTCAGAAAATCAAAGTGAATGTTGTTATGGCAAATCGAAATTCAA 1802 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| Sbjct 647 TGTCATCTTTTGTTGGCCAGAAAATCAAAGTGAATGTTGTTATGGCTAATCGAAACTCAA 706 Query 1803 GGAAGCTTATATTTTCAATGAGGCCGAGAGAAAATGAAGAGGAAGTTGAGAAAAAACGAA 1862 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 707 GGAAGCTTATATTTTCGATGAGGCCGAGAGAAAATGAAGAGGAAGTTGAGAAAAAACGAA 766 Query 1863 CTCTTATGGCTAAGCTTCGTGTTGGGGATGTTGTGAAATGCTGCATCAAGAAAATTACCT 1922 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 767 ATCTTATGGCTAAGCTTCGTGTTGGGGATGTTGTGAAATGCTGCATCAAGAAAATTACCT 826 Query 1923 ATTTTGGTATTTTCTGTGAG 1942 ||||||||||||| |||||| Sbjct 827 ATTTTGGTATTTTTTGTGAG 846 > Ahg911029 jgi|Araly1|911029|Al_scaffold_0001_1283 Length=1983 Score = 867 bits (469), Expect = 0.0 Identities = 665/755 (88%), Gaps = 31/755 (4%) Strand=Plus/Plus Query 554 CCTGTT-CTGAAAGATGGAGTCAA-GTTCGAAAGGCCAGTGATGAAGAAGCCAAGCCCTG 611 |||||| || ||||| ||||| || || |||| |||||||||||| ||||||| ||||| Sbjct 328 CCTGTTCCT-AAAGACGGAGTTAACCTT-GAAAAGCCAGTGATGAAAAAGCCAAACCCTG 385 Query 612 TTTTGAAGAAGCCATTGGTGG-AG--GC---T---GTTGCTGCTCCAAAGGTGCAGAGAT 662 |||||||||||||||||| || | || | ||||||||||||||||||||||||| Sbjct 386 TTTTGAAGAAGCCATTGGAGGCTGCTGCTGTTCCAGTTGCTGCTCCAAAGGTGCAGAGAT 445 Query 663 TGCCTAATGTTATATTGAGAAAGCCGAGTTCGTTTTATACTAGTAATGGTGATGATGAGG 722 ||||||||||||||||||||||||||||||||||||| | ||||||| | || |||| Sbjct 446 TGCCTAATGTTATATTGAGAAAGCCGAGTTCGTTTTACGCGAGTAATGACAACGACGAGG 505 Query 723 AGTCTAAGTTGCGGTTGAAACCGAATCTGACATTGAAAATGAGAAATGAGAGGGAAAATG 782 |||||| ||||||||||||||||||| ||||| |||||||||| |||||||||||||||| Sbjct 506 AGTCTATGTTGCGGTTGAAACCGAATTTGACACTGAAAATGAGGAATGAGAGGGAAAATG 565 Query 783 AGAGGTTTAGTGATATGACATTGTTGAGAAAACCGGAACCAGTGAGCGTAGTTG-CAGAA 841 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| | | ||| Sbjct 566 AGAGGTTTAGTGATATGACATTGTTGAGAAAACGGGAGCCAGTGAGCGTAGAAGAC-GAA 624 Query 842 GA-G--GAAGACAAGCCTCTTTCTGATGATTTAACTATGGAGGAAGGAGAACAGGAAGGT 898 | | ||||| ||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 625 AATGCTGAAGATAAGCCTCTTTCTGATGATTTAACTATGGAGGAAGGAGAACAAGAAGAT 684 Query 899 GGAACATATTCACAGTATACTCTTTTGGAGAAGCCAGAAGCGAGGCTCCAGCCTGTCAAT 958 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 685 GGAACATATTCACAGTATACTCTTTTGGAGAAGCCAGAAGCGAGGCTCGAGCCTATCAAT 744 Query 959 GTAGAAGAGGAAGTTGGAGATAGCGGAGGAGTGGAATCATCTGAGATAGTAAACAACTCA 1018 |||||||||| ||||||||||||||||| |||||||||||| ||||||| |||||||||| Sbjct 745 GTAGAAGAGGTAGTTGGAGATAGCGGAGCAGTGGAATCATCAGAGATAGAAAACAACTCA 804 Query 1019 ATTCAGAAGCCAGAAGCAAGGC-CAGAGCTTGAGAACATAGAAAAGGAAGTTGCAGATAG 1077 |||||||||||||||||||||| | |||| || ||| ||||| ||||||||| |||||| Sbjct 805 ATTCAGAAGCCAGAAGCAAGGCTC-GAGCCTGTGAATGTAGAAGAGGAAGTTGGAGATAG 863 Query 1078 CGGAGTTTTGGAATCATCGGAGATAGAAAATAATTCAATTCCAACTGAAATGCAGCTCAA 1137 ||||| | |||||||| |||||||||||||| || |||||||||||||||||||| || Sbjct 864 CGGAGCTGCAGAATCATCAGAGATAGAAAATAACTCTATTCCAACTGAAATGCAGCTTAA 923 Query 1138 TAGCGAGA--T----G---TCCTCTGAGGAGAAAACTATTAACAGTGA-TCCACTCGAGA 1187 | | ||| | | ||||||||||||||||| ||||||||||| || ||| |||| Sbjct 924 AATCCAGAGGTCCTCGGGCTCCTCTGAGGAGAAAACCATTAACAGTGACTC-ACTTGAGA 982 Query 1188 GAATTCCTTCGAAACCAATTTCTCAAACCATCGTCGAAGCTTCTTTACAAGGGAAACCAC 1247 | ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 983 GGATTCCTTCGAAACCAGTTTCTCAAACCATCGTAGAAGCTTCTTTACAAGGGAAACCAC 1042 Query 1248 AAAGATTAGACCCGTCTTCCGCTGAGCCATCAGTT 1282 |||| |||||||||||||| || |||||||||||| Sbjct 1043 AAAGGTTAGACCCGTCTTCTGCCGAGCCATCAGTT 1077 Score = 632 bits (342), Expect = 4e-180 Identities = 374/390 (96%), Gaps = 0/390 (0%) Strand=Plus/Plus Query 1373 GAAAATGATTGGAATAAGGCAGAGTCTCTAGTTAAAACAGAATTACGAGCAGATGTTGAG 1432 ||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||| Sbjct 1084 GAAAATGATTGGAATAAGGCAGAGTCTCTAGTTAAGACGGAATTACGGGCAGATGTTGAG 1143 Query 1433 CTAATAAGTTCAAGCACTAGAGGATTTGCTGTTTCCTATGGATCTTTGATTGGATTTTTA 1492 |||||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 1144 CTAATAAGCTCGAGCACTAGAGGCTTTGCTGTTTCCTATGGATCTTTGATCGGATTTTTA 1203 Query 1493 CCCTACCGGAACCTTGCAGCAAAATGGAAGTTTCTCGCATTTGAATCATGGTTAAGAAGA 1552 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 1204 CCCTACCGGAACCTTGCAGCAAAATGGAAATTTCTCGCATTTGAATCATGGTTACGAAGA 1263 Query 1553 AAAGGTGTAGATCCATCACCGTATCGACAAAACCTTGGGGTAATTGGAGGTCAAGATGTC 1612 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1264 AAAGGTGTAGATCCATCATTGTATCGACAAAACCTTGGGGTAATTGGAGGTCAAGATGTC 1323 Query 1613 ACGAGTAAATCTCCATCTCCAGATTCAAGCTTAGATTCTGAAGTCGCTACAACGATCAAC 1672 ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1324 ACGAGTAAAGCTCCATCTCCAGATTCAAGCTTAGATTCTGAAGACGCTACAACGATCAAC 1383 Query 1673 GGAGAAGTTTCTTCTGATATGAAGCTGGAAGATCTTCTTATGGTATATGACAGAGAGAAG 1732 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1384 GGAGAAGTTTCTTCTGATATGAAGCTGGAAGATCTTCTTATGGTATATGACAGAGAAAAG 1443 Query 1733 CAGAAGTTCCTGTCATCTTTTGTTGGTCAG 1762 ||||||||||||||||||| |||||| ||| Sbjct 1444 CAGAAGTTCCTGTCATCTTATGTTGGCCAG 1473 Score = 562 bits (304), Expect = 5e-159 Identities = 340/358 (95%), Gaps = 0/358 (0%) Strand=Plus/Plus Query 2028 AGATTGTGGAAGCGAAAGTGCACCAGCTAGATTTTGCTCTTGAACGTATCTTCTTGTCAT 2087 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1610 AGATTGTGGAAGCGAAAGTGCACCAGCTGGATTTTGCTCTTGAACGTATCTTCTTGTCGC 1669 Query 2088 TAAAAGAAATTACGCCTGATCCTCTTACTGAAGCTTTAGAATCTGTAGTTGGTGGTGATA 2147 |||||||||| ||||||||||| || || ||||| ||||||||||||||||||||||||| Sbjct 1670 TAAAAGAAATCACGCCTGATCCACTAACCGAAGCCTTAGAATCTGTAGTTGGTGGTGATA 1729 Query 2148 ATGATCAGTTGGGGGGACGATTACAAGCAGCAGAGCTCGACGCTGAGTGGCCTGACGTGG 2207 |||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 1730 ATGATCAGTTCGGGGCACGGTTACAAGCAGCAGAGCTCGACGCTGAGTGGCCTGATGTGG 1789 Query 2208 AATCTCTGATCAAAGAGCTGGAAATGGTTGAAGGAATCCAATCAGTCTCAAAAAGTCGTT 2267 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 1790 AATCTCTGATCAAAGAGCTGGAAATGGTTGAAGGAATTCAATCAGTTTCAAAAAGTCGTT 1849 Query 2268 TCTTCTTGAGTCCGGGTCTTGCTCCAACGTTTCAGGTTTACATGGCTCCAATGTTTGAGA 2327 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1850 TCTTCTTGAGCCCGGGTCTTGCTCCAACGTTTCAGGTTTACATGGCTCCAATGTTTGAGA 1909 Query 2328 ACCAATACAAACTGCTTGCTCGAGCTGGAAACAGAGTACAAGAGCTTATTGTTGAAGC 2385 ||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| Sbjct 1910 ACCAATACAAACTGCTTGCTCGAGCTGGACATAGAGTACAAGAGCTTATTGTTCAAGC 1967 Score = 392 bits (212), Expect = 7e-108 Identities = 290/326 (89%), Gaps = 11/326 (3%) Strand=Plus/Plus Query 143 ATGGACGTTCTCGCCTTATCCTCTTCCGCTTCCGCCGCCGC-A------C-CCTCCG-CT 193 |||||||||| |||||||||||||||||||||||||||||| | | ||| || || Sbjct 1 ATGGACGTTCACGCCTTATCCTCTTCCGCTTCCGCCGCCGCAACCGCCGCACCTGCGTCT 60 Query 194 TCTCTCGCCGGAAAATTCCTGTCGTTTCCTTCTAGGGTTAGAGTGAGAAGAAACCGA-GA 252 | | |||||||||| |||| || |||||||||||| |||||| |||||||||| | | || Sbjct 61 TATATCGCCGGAAACTTCCCGTTGTTTCCTTCTAGTGTTAGATTGAGAAGAAA-CAAGGA 119 Query 253 GAATTTGTTAGCTAAACAGAAGAAGTTTTTAGTTTCTGCTTCGAAAAGAGAAGAGCCTAA 312 ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 120 TAATTTATTAGCTAAACAGAAGAAATTTGTAGTTTCTGCTTCGAAAAGAGAAGAGCCTAA 179 Query 313 GCTCAACGAATGGGATCAAATGGAGCTCAACTTTGGCCGTTTACTCGGCGAAGACCCGAA 372 |||||||||||||||||||||||||||||| || || ||||||||||| || |||||||| Sbjct 180 GCTCAACGAATGGGATCAAATGGAGCTCAAGTTCGGACGTTTACTCGGAGAGGACCCGAA 239 Query 373 ATTGACTTTGGCTAAGATAGTAGCTAGAAAAGTGGATCCAGAAGCTTCTTTTATTGACAT 432 ||||||||||||||||||||| | |||||||||| |||||||||||||||| |||| || Sbjct 240 ATTGACTTTGGCTAAGATAGTGGGTAGAAAAGTGAATCCAGAAGCTTCTTTCGTTGAAAT 299 Query 433 TGAGAAATCTTTCTACAAGAACAAAG 458 |||||||||||||||||||||||||| Sbjct 300 TGAGAAATCTTTCTACAAGAACAAAG 325 Score = 226 bits (122), Expect = 7e-58 Identities = 135/141 (96%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 1802 AGGAAGCTTATATTTTCAATGAGGCCGAGAGAAAATGAAGAGGAAGTTGAGAAAAAACGA 1861 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1472 AGGAAGCTTATA-TTTCGATGAGGCCGAGAGAAAATGAAGAGGAAGTTGAGAAAAAACGA 1530 Query 1862 ACTCTTATGGCTAAGCTTCGTGTTGGGGATGTTGTGAAATGCTGCATCAAGAAAATTACC 1921 | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1531 AATCTTATGGCTAAGCTTCGTGTTGGGGATGTTGTGAAATGCTGCATCAAGAAGATTACC 1590 Query 1922 TATTTTGGTATTTTCTGTGAG 1942 ||||| ||||| ||||||||| Sbjct 1591 TATTTCGGTATATTCTGTGAG 1611 Score = 117 bits (63), Expect = 4e-25 Identities = 85/96 (89%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 927 AGAAGCCAGAAGCGAGGCTCCAGCCTGTCAATGTAGAAGAGGAAGTTGGAGATAGCGGAG 986 ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 809 AGAAGCCAGAAGCAAGGCTCGAGCCTGTGAATGTAGAAGAGGAAGTTGGAGATAGCGGAG 868 Query 987 GAGTGGAATCATCTGAGATAGTAAACAACTCAATTC 1022 | |||||||| ||||||| ||| ||||| |||| Sbjct 869 CTGCAGAATCATCAGAGATAGAAAATAACTCTATTC 904 > Ahg920172 jgi|Araly1|920172|scaffold_101453.1 Length=254 Score = 135 bits (73), Expect = 1e-30 Identities = 87/94 (93%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 2101 GCCTGATCCTCTTACTGAAGCTTTAGAATCTGTAGTTGGTGGTGATAATGATCAGTTGGG 2160 ||||||||| || || ||||| ||||||||||||||||||||||||||||||||||| || Sbjct 27 GCCTGATCCACTAACCGAAGCCTTAGAATCTGTAGTTGGTGGTGATAATGATCAGTTCGG 86 Query 2161 GGGACGATTACAAGCAGCAGAGCTCGACGCTGAG 2194 |||||| ||||||| ||||||||||||||||||| Sbjct 87 GGGACGGTTACAAGTAGCAGAGCTCGACGCTGAG 120 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 100824878515 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5