BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G18460.1 Length=2460 Score E Sequences producing significant alignments: (Bits) Value Ahg472064 jgi|Araly1|472064|fgenesh2_kg.1__2018__AT1G18460.1 3727 0.0 Ahg476529 jgi|Araly1|476529|fgenesh2_kg.2__1659__AT1G73920.1 1565 0.0 > Ahg472064 jgi|Araly1|472064|fgenesh2_kg.1__2018__AT1G18460.1 Length=2377 Score = 3727 bits (2018), Expect = 0.0 Identities = 2237/2342 (96%), Gaps = 17/2342 (1%) Strand=Plus/Plus Query 52 aaaaaaaaaCGTTTCTTTTCTCTTCGATTCCCGATTACGGCttttgattttgtgggactc 111 ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||| Sbjct 1 AAAAAAAAACGTTTCTTTTTTCTTCGATTCGCGATTACGTCTTTTGATTTTGTGGGACTC 60 Query 112 ttctcagtttttctggg-cttttggtttttggattctatcttcttt-catttttcag-at 168 |||| ||||||||||| | ||| | |||||||||||||||| ||| |||||||||| || Sbjct 61 ATCTCGGTTTTTCTGGGAC-TTT-GATTTTGGATTCTATCTT-TTTACATTTTTCAGAAT 117 Query 169 tttttattttattttgttgtatttctatatt-GGGAAACAAAATCATGCAGAGGATCGTC 227 ||||| |||| |||| || | ||| |||||| |||||||||||||||||||||||||||| Sbjct 118 TTTTT-TTTT-TTTTTTTTTTTTTTTATATTGGGGAAACAAAATCATGCAGAGGATCGTC 175 Query 228 GATAATGCTCTTGCTATCACAAAAGAGTCAGTGAAAACTCTGACTTATGAGTCTTTGAAC 287 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 176 GATAATGCTCTTGCTGTCACAAAAGAGTCAGTGAAAACTTTGACTTATGAGTCTTTGAAC 235 Query 288 AACATTGCAAGATGCATTAATGGATTTTCTGCGCTTCTCTTGACACTTTTGCCCGGAAAG 347 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 236 AACTTTGCAAGATGCATTAATGGATTTTCTGCGCTTCTCTTGACACTTTTGCCCGGAAAG 295 Query 348 TCCAATGTTCTTGAAGGTCTTCATGGATGGGAGCTTAGGCCTACATTGCGTGGACCTCGT 407 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct 296 TCCAATGTTCTTGAAGGTCTTCATGGATGGGAGCTCAGGCCGACATTGCGTGGACCTCGT 355 Query 408 TTACCACGCTGGATGCATAATGGAGTCTCTTCTTTCAACCACTTCATTCACGAACTCTCT 467 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 356 TTACCACGGTGGATGCATAATGGAGTCTCTTCTTTCAACCACTTCATTCACGAGCTCTCT 415 Query 468 GTGGATTCTGATACTTCTAGCTTGGACTATTCCTCTGGTGATGATGATAGTGATGGCATG 527 ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| Sbjct 416 GTGGATTCTGATACTTCAAGCTTGGACTATTCCTCTGGAGAAGATGATAGTGATGGCATC 475 Query 528 TCCACGCCTCCATCACCCTTGTCTCAAAGCTCACTCCGCTCTTGGGCTAGTCTTCCTGCC 587 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 476 TCCACGCCTCCATCACCCTTGTCTCAAAGCTCACTCCGCTCTTGGGCTAGTCTTCCTGCA 535 Query 588 AATTACGAAAGCCATTGGACAGACTGGATAACCTTCATTGTCTGGTGGGCTTTACTACCT 647 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 536 AATTACGAAAGCCATTGGACAGAGTGGATAACCTTCATTGTCTGGTGGGTTTTACTACCT 595 Query 648 GCCCGGATCCTTCTATGGGTACCATTATATCTTTTACGTCTTTTAGCTAGAAGAAATTCA 707 |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||| Sbjct 596 GCCCGGATCCTTCTATGGTTACCATTATATCTTTTACGTCTTTTAGGTAGACGAAATTCA 655 Query 708 AGAATG-CAGCCTCTGAGCCCAGGAAGGTACCAACATTCGTCTAGACCTTGTTTTAGCAA 766 |||||| || ||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 656 AGAATGTCA-CCTATGAGCCCAGGAAGGTACCAACATTCGTCTAGACCTTATTTTAGCAA 714 Query 767 AGCTATCTCAGGGAAAGAGCATGACGTGCCC-AACCGAACTACTGATAAAAGACGCGGAG 825 ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 715 AGCTATCCCAGGGAAAGAGCATGACGT-CCCTAACCGAACTACTGATAAAAGACGCGGAG 773 Query 826 TCATTGAGGATCTTCAGCTTGGTATCGAGATCTTTATAGAAACAATATTTGATTTCTTTC 885 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 774 TCATTGAGGATCTTCAGCTTGGTATCGAGATCTTTATAGAAACAATATTTGATTTTTTTC 833 Query 886 ACAAGGCGGCACATCTTCTTCTTTCTCCATCAGAAACTTTTGGAATAGTTTTATCATGGT 945 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 834 ACAAGGCGGCACATCTTCTTCTTTCTCCATCAGAAACTTTTGGAATAGTTTTATCATGGT 893 Query 946 TCTCTTCCTCCAGTCACAGCTCTAAAGGAAACTATGGTGACGTTTCGGATGATGAGATCA 1005 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 894 TCTCTTCCTCCAGTCACAGCTCTAAAGGAAACTATGGCGACGCTTCGGATGATGAGATCG 953 Query 1006 TTCAGACTGCCATTCTAGGAGATAACGATTCATCTCTTACAGAAAGAAGAACCACAACGA 1065 | |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | Sbjct 954 TGCAGACTGCCATTCTAGGAGATAGTGATTCATCTCCTACAGAAAGAAGAACCACAACAA 1013 Query 1066 GCTTATACAATACAGATACCCGGACCTGTCAAGATGTTATAACAGAGCTTGGGTATCCAT 1125 ||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| | Sbjct 1014 GCTTATACAATACAGATACTCGGACTTGTCAAGATGTTATAACAGAGTTTGGGTATCCGT 1073 Query 1126 ATGAAGCTATTCGTGTTGTTACATCTGATGGATATGGTCTTCTCTTGGAAAGGATACCAA 1185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1074 ATGAAGCTATTCGTGTTGTTACATCTGATGGATATGGTCTTCTCTTGGAAAGGATACCAA 1133 Query 1186 GACGAGATGCGAGGAAAGCTGTTTATTTGCAGCATGGTGTAATGGATTCTTCAATGGGAT 1245 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1134 GACGAGATGCCAGGAAAGCTGTTTATTTGCAGCATGGTGTAATGGATTCTTCAATGGGAT 1193 Query 1246 GGGTATCAAATGGTGTTGTTGGATCACCAGCTTTTGCAGCTTATGATCAAGGCTACGATG 1305 ||||||||||||||||||||||||| || |||||||| ||||||||||||||||| |||| Sbjct 1194 GGGTATCAAATGGTGTTGTTGGATCTCCGGCTTTTGCTGCTTATGATCAAGGCTATGATG 1253 Query 1306 TTTTCCTAGGGAACTTTCGTGGTTTAGTTTCAAGAGATCATGTGaaaaaaaaCATATCCT 1365 ||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| Sbjct 1254 TTTTCCTAGGGAACTTTCGCGGTTTAGTTTCAAGAGATCATGTGAACAAAAACTTATCCT 1313 Query 1366 CAAAAGATTTCTGGCGTTACTCCATCAATGAACATGCAACGGAAGATATCCCAGCAATGA 1425 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 1314 CAAAAGATTTCTGGCGTTACTCCATCAATGAGCATGCAACAGAAGATATCCCAGCAATGA 1373 Query 1426 TAGAGAAGATTCACGAAATCAAAACTTCAGAACTGAAACTTTATCAGCCTACTATGGAAG 1485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1374 TAGAGAAGATTCACGAAATCAAAACTTCAGAACTGAAACTTTATCAGCCTACTATGGAAG 1433 Query 1486 AGGTAGTAAACGAGGATCAACCGTATAAGCTTTGTGTTGTATCTCACAGTTTAGGCGGTG 1545 |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| | Sbjct 1434 AGGTAGTAAACGAGGAGCAACCATATAAGCTCTGTGTTGTATCTCACAGTTTAGGCGGCG 1493 Query 1546 CCGCGGTTCTGATGTATGTAATCACCCGTAAAATCGAAGAGAAACCGCACAGACTCTCGA 1605 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1494 CCGCAGTTCTGATGTATGTAATCACCCGTAAAATCGAAGAGAAACCGCACAGACTCTCGA 1553 Query 1606 GACTGATCCTT-CTTTCGCCTGCTGGGTTTCACTATGACTCCAACATGTGTTTCACGTTG 1664 ||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 1554 GACTGGT-CTTGCTTTCGCCTGCTGGGTTTCACGATGACTCCAACATGTGTTTCACATTG 1612 Query 1665 ATGGAGTACACGTTCCTTTTCTTGGGTCCTGTACTATCTCGGATTGTTCCTGCTTTCTAC 1724 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1613 ATGGAGTACACATTCCTTCTCTTGGGTCCTGTACTATCTCGGATTGTTCCTGCTTTCTAC 1672 Query 1725 ATCCCCACTAAATTCTTCCGGATGCTTCTCAACAAGTTAGCTCGAGATTTCCATAACTAT 1784 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1673 ATCCCCACTAAATTCTTCAGGATGCTTCTCAACAAGTTAGCTCGAGATTTCCATAACTAT 1732 Query 1785 CCTGCTGTTGGTGGATTAGTCCAAACATTGATGAGTTATGTAGTTGGCGGAGATAGCTCA 1844 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1733 CCTGCTGTTGGTGGATTAGTCCAGACATTGATGAGTTATGTAGTTGGCGGAGATAGCTCA 1792 Query 1845 AACTGGGTTGGAGTCATGGGATTGCCTCACTATAACATGAACGATATGCCAGGTATATCC 1904 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1793 AACTGGGTTGGAGTCATGGGATTGCCTCACTATAACATGAACGATATGCCAGGTATATCC 1852 Query 1905 TTCCGTGTGGCTCAGCATCTTGCACAGATTAAACATAGCGGTAAGTTCAAGATGTTTGAT 1964 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1853 TTCCGTGTGGCTCAGCATCTTGCGCAGATTAAACATAGCGGTAAGTTCAAGATGTTTGAT 1912 Query 1965 TACGGTAGCAGTTCAGCTAATATGGATGTTTACGGGTCCCCTGAGCCGCTCGATCTTGGG 2024 |||||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||| Sbjct 1913 TACGGTAGCAGTTCAGCTAATATGGAGGTTTACGGGTCTCCTGAGCCACTCGACCTTGGG 1972 Query 2025 GAGTTTTATGGGTTGATCGATGTGCCTGTGGATTTAGTAGCTGGAAAGAAAGACAAAGTG 2084 |||||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 1973 GAGTTTTACGGGTTAATCGATGTGCCTGTGGATTTAGTAGCCGGAAAGAAAGATAAAGTG 2032 Query 2085 ATTAGACCTTCAATGGTTAGGAAACATTACAGGGTGATGAGAGATTCAGGAGTAGATGTT 2144 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2033 ATTAGACCTTCAATGGTTAGGAAACATTACAGGGTGATGAGAGATTCAGGAGTTGATGTT 2092 Query 2145 TCTTACAATGAGTTTGAGTATGCTCATTTGGATTTTACCTTCTCTCACCGTGAAGAGCTT 2204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2093 TCTTACAATGAGTTTGAGTATGCTCATTTGGATTTTACCTTCTCTCACCGTGAAGAGCTT 2152 Query 2205 TTGGCGTATGTGATGTCGCGGTTACTTCTCGTGGAGCCAACGCAGACTCAGACGGTTCAT 2264 |||||||||||||||||||||||||| |||||||||||||||| |||||||| |||| Sbjct 2153 TTGGCGTATGTGATGTCGCGGTTACTGCTCGTGGAGCCAACGCCCACTCAGACAAATCAT 2212 Query 2265 AAGAAGGGGATGAAGCTGAAGAAGAAAATGGAAACAGGCAAACCTCATCTGTGAACTACT 2324 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| Sbjct 2213 AAGAAGGGGATGAAGCTGAAGAAGAAGATGGAAACAGGCAAACCTCATCTATGAATTAC- 2271 Query 2325 AGAAG-AGGCTTTTATAGAGTTTATGTTTGTCGTCTTTGTAATGTTTTTTGTTCACGAAA 2383 |||| ||||||||| |||||||||||||||| | ||||||||||||||||||||||||| Sbjct 2272 AGAATTAGGCTTTTACAGAGTTTATGTTTGTCTTATTTGTAATGTTTTTTGTTCACGAAA 2331 Query 2384 GT 2385 || Sbjct 2332 GT 2333 > Ahg476529 jgi|Araly1|476529|fgenesh2_kg.2__1659__AT1G73920.1 Length=2471 Score = 1565 bits (847), Expect = 0.0 Identities = 1683/2075 (81%), Gaps = 103/2075 (5%) Strand=Plus/Plus Query 207 AAAATCATGCAGA-GGATCGTCGATAATGCTCTTGCTATCACAAAAGAGTCAGTGAAAAC 265 ||| ||||||| | ||||||| || || ||||| ||| | || ||||| ||||||||||| Sbjct 167 AAAGTCATGCA-ACGGATCGTAGACAACGCTCTCGCTGTAACCAAAGAATCAGTGAAAAC 225 Query 266 TCTGACTTATGAGTCTTTGAACAACATTGCAAGATGCATTAATGGATTTTCTGCGCTTCT 325 | | || |||||||||||||||||||||||||||||||| |||||| | || || ||||| Sbjct 226 TGTTACATATGAGTCTTTGAACAACATTGCAAGATGCATAAATGGAGTATCAGCTCTTCT 285 Query 326 CTTGACACTTTTGCCCGG-AAAGTCCAATGTTCTTGAAGGTCTTCATGGATGGGAGCTTA 384 ||||| ||| | || || |||| | ||| ||||||||||||| ||||| ||||| || | Sbjct 286 GTTGACTCTTCTACCGGGGAAAG-CTAATATTCTTGAAGGTCTCCATGGCTGGGAACTCA 344 Query 385 GGCCTACATTGCGTGGACCTCGTTTACCACGCTGGATGCATAATGGAGTCTCTTCTTTCA 444 |||| || || |||||||| ||||||||||| |||||||||||||| ||||||||||||| Sbjct 345 GGCCCACGTTTCGTGGACCACGTTTACCACGGTGGATGCATAATGGGGTCTCTTCTTTCA 404 Query 445 ACCACTTCATTCACGAACTCTCTGTGGATTCTGATACTTCTAGCTTGGACTATTCCTCTG 504 || | |||||||| || || |||||||||||||||||||| |||||||| ||||| |||| Sbjct 405 ACGAGTTCATTCATGAGCTTTCTGTGGATTCTGATACTTCAAGCTTGGAGTATTCTTCTG 464 Query 505 GTGATGATGATAGTGATGGCATGTCC-ACGCCTCCATCACCCTTGTCTCAAAGCTCACTC 563 | || | ||||||||||| | || | |||||||||||| | ||||||||||||| | Sbjct 465 GAGA--A-GATAGTGATGG--T--CCGATGCCTCCATCACCATCATCTCAAAGCTCACGC 517 Query 564 CGCTCTTGGGCTAGT-CTTCCTGCCAA-TTAC-GAAAGCCATTGGACAGACTGGATAACC 620 | |||||||||||| |||| ||| || || | |||| ||| |||||||| ||||| || Sbjct 518 CTCTCTTGGGCTAGCACTTC-TGC-AAGTT-CTGAAAACCACTGGACAGAGTGGATTACG 574 Query 621 TTCATTGTCTGGTGGGCTT--TACTACCTGCC-CGGATCCTT-CTATGGGTACCATTATA 676 |||||| | |||||| || || | ||| | |||||| || |||||| |||| ||| Sbjct 575 TTCATTCTTTGGTGG--TTAATATTTCCT-CTACGGATC-TTGCTATGGATACCGCAATA 630 Query 677 TCTTTT-ACGTCTT-TTAGCT-AGAA-GAAATTCAAGAATGCAGCCT-CTGAGCCC-AGG 730 | || | | || || || || | || ||| |||| || | ||| | |||||| || Sbjct 631 TATTATGA-GT-TTATTC-CTTA-AACGAAGTTCACCAA--CT-CCTGC-GAGCCCGAG- 681 Query 731 AAGGTACCAACATTCGTCTAGACCTTGTTTTAGCAA-AGCTATCTCAGGGAAAGAGCATG 789 |||| |||||||||| ||||||| | || |||| || | | || ||| | ||||| |||| Sbjct 682 AAGGCACCAACATTCATCTAGACATCGTATTAGTAAGACCAAT-TCAAGCAAAGACCATG 740 Query 790 ACGTGCCCAACCGAACTACTGATAAAAGACGCGGAGTCATTGAGGATCTTCAGCTTGGTA 849 | || ||||||||||||||||||| |||||||||||| |||||||||||||| |||| || Sbjct 741 ATGTTCCCAACCGAACTACTGATAGAAGACGCGGAGTGATTGAGGATCTTCATCTTGCTA 800 Query 850 TCGAGATCTTTATAGAAACAATATTTGATTTCTTTCACAAGGCGGCACATCTTCTTCTTT 909 |||||||| |||||| ||||||||||||| ||||||||| | ||||||||||||||| Sbjct 801 TCGAGATCGCCATAGAAGCAATATTTGATTTTTTTCACAAGACTACACATCTTCTTCTTT 860 Query 910 CTCCATCAGAAACTTTTGGAATAGTTTTATCATGGTTCTCTTCCTCCAGTCACAGCTCTA 969 ||||||||||| |||||| |||| | |||||||||||||| || |||||||||||| ||| Sbjct 861 CTCCATCAGAAGCTTTTGCAATACTGTTATCATGGTTCTCATCTTCCAGTCACAGCCCTA 920 Query 970 AAGGAAACTATGGTGACGTTTCGGATGATGAGATCAT-T-CAGACTGCCA-TTCTAGGAG 1026 ||| |||| ||||||||||| | ||||||| || | | | || ||||| | || |||||| Sbjct 921 AAGAAAACCATGGTGACGTTACAGATGATG-GAAC-TGTGCAAACTGCTACTT-TAGGAG 977 Query 1027 ATAAC-GATTCATCTCTTACAGAAAG----A-AGAA---CC-ACAACGAGCTTATACAA- 1075 ||| | ||| |||| | || ||||| | |||| || ||| || ||||||||| Sbjct 978 ATA-CTGATCCATCCCCCACGGAAAGGCCCATAGAAAGGCCCACA-CG--CTTATACAAC 1033 Query 1076 T--A----CA--GATACCCGGACCTGTCAAGATGTTATAACAGAGCTTGGGTATCCATAT 1127 | | || ||||| || || ||||||||||| ||||||||||| |||||||| || Sbjct 1034 TCTATGAACACAGATACTCGAACGTGTCAAGATGTCATAACAGAGCTGGGGTATCCTTAC 1093 Query 1128 GAAGCTATTCGTGTTGTTACATCTGATGGATATGGTCTTCTCTTGGAAAGGATACCAAGA 1187 |||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| Sbjct 1094 GAAGCTATTCGTGTTGTTACATCTGACGGATATGTTCTTGTCTTGGAAAGGATACCAAGA 1153 Query 1188 CGAGATGCGAGGAAAGCTGTTTATTTGCAGCATGGTGTAATGGATTCTTCAATGGGATGG 1247 || ||||| ||||||||||||| |||||||||||| || ||||||| || ||||||||| Sbjct 1154 CGTGATGCTAGGAAAGCTGTTTTTTTGCAGCATGGGGTTTTGGATTCATCTATGGGATGG 1213 Query 1248 GTATCAAATGGTGTTGTTGGATCACCAGCTTTTGCAGCTTATGATCAAGGCTACGATGTT 1307 || || ||||| ||||||||||| || |||||||| || ||||| ||||||||||||||| Sbjct 1214 GTCTCTAATGGGGTTGTTGGATCTCCGGCTTTTGCTGCGTATGACCAAGGCTACGATGTT 1273 Query 1308 TTCCTAGGG-AACTTTCGTGGTTTAGTTTCAAGAGATCATGTGaaaaaaaaCATATCCTC 1366 || || ||| |||||||| |||||||||||||||||||||||||| || ||||||||||| Sbjct 1274 TTTCT-GGGTAACTTTCGGGGTTTAGTTTCAAGAGATCATGTGAACAAGAACATATCCTC 1332 Query 1367 AAAAGATTTCTGGCGTTACTCCATCAATGAACATGCAACGGAAGATATCCCAGCAATGAT 1426 |||||| |||||||| |||||||| || || || | || |||||||||||||| ||||| Sbjct 1333 AAAAGAGTTCTGGCGATACTCCATTAACGAGCACGGTACTGAAGATATCCCAGCGATGAT 1392 Query 1427 AGAGAAGATTCACGAAATCAAAACTTCAGAACTGAAACTTTATCAGCCTACTATGGAAGA 1486 ||| || ||||| ||||| |||||| ||||||| || || || ||||| | ||| || || Sbjct 1393 AGAAAAAATTCATGAAATAAAAACTACAGAACTCAAGCTCTACCAGCCCAATATCGATGA 1452 Query 1487 GGTAGTAA--A-CGAGGATCAACCGTATAAGCTTTGTGTTGTATCTCACAGTTTAGGCGG 1543 | || || | | |||| | || |||||||| |||| | | ||| ||| ||||||| Sbjct 1453 TGAAGAAAGCAACCAGGAGGAGCCTTATAAGCTCTGTGCCATCTGTCATAGTCTAGGCGG 1512 Query 1544 TGCCGCGGTTCTGATGTATGTAATCACCCGTAAAATCGAAG-AGAAACCGCACAGACTCT 1602 ||| || ||||||||||||| || || || |||||| ||| |||| || |||||||||| Sbjct 1513 TGCTGCAATTCTGATGTATGTTATTACTCGAAAAATC-AAGGAGAAGCCACACAGACTCT 1571 Query 1603 CGA-GACTGATCCTTCTTTCGCCTGCTGGGTTTCACT-ATGACTCCAACAT-GTGTTTCA 1659 | | |||| ||||| ||||| |||||||||||||| | | ||||| ||| | | |||||| Sbjct 1572 C-ACGACTAATCCTACTTTCACCTGCTGGGTTTCA-TGAGGACTCGAACTTAG-GTTTCA 1628 Query 1660 CGTT-GATGGAGTACACGTTCCTTTTC-TTGGGTCCTGTACTATCTCGGATTGTTCCTGC 1717 | | | || |||||| ||||||||| || | ||| || | |||| || || ||||| Sbjct 1629 CAATAGTTG-AGTACATATTCCTTTTCATTAG-TCCAGTTTTGGCTCGCATCGTGCCTGC 1686 Query 1718 TTTCTACATCCCCACTAA-ATTCTTCCGGATGCTTCTCAACAAGTTAGCTCGAGA-TTTC 1775 |||||||| || || || ||||||| |||||||||| |||||||||||||| || |||| Sbjct 1687 CTTCTACATACCGAC-AAGATTCTTCAGGATGCTTCTGAACAAGTTAGCTCGTGACTTTC 1745 Query 1776 CATAACTATCCTGCTGTTGGTGGATTAGTCCAAACAT-TGATGAGTTATGTAGTTGGCGG 1834 | |||||||||||| |||||||||| |||||||| | | ||||||||||||||||| || Sbjct 1746 -ACAACTATCCTGCTCTTGGTGGATTGGTCCAAAC-TCTAATGAGTTATGTAGTTGGTGG 1803 Query 1835 AGATAGCTCAAACTGGGTTGGAGTCATGGGATTGCCTCACTATAACATGAACGATATGCC 1894 ||| ||||| || ||||| |||||| | ||||| |||||||| ||||||||||| ||||| Sbjct 1804 AGACAGCTCGAATTGGGTCGGAGTCCTAGGATTACCTCACTACAACATGAACGACATGCC 1863 Query 1895 AGGTATATCCTTCCGTGTGGCTCAGCATCTTGCACAGATTAAACATAGCGGTAAGTTCAA 1954 || | | ||||| |||||||| || |||||||| ||||| ||||| |||||||| |||| Sbjct 1864 AGCTGTCTCCTTTCGTGTGGCGCAACATCTTGCTCAGATCAAACACAGCGGTAAATTCAG 1923 Query 1955 GATGTTTGATTACGGTAGCAGTTCAGCTAATATGGATGTTTACGGGTCCCCTGAGCCGCT 2014 ||||| |||||| || ||||| ||| |||| ||||| ||||| || || ||||| || || Sbjct 1924 GATGTATGATTATGGAAGCAGATCATCTAACATGGAGGTTTATGGCTCTCCTGAACCCCT 1983 Query 2015 CGATCTTGGGGAGTTTTATGGGTTGATCGATGTGCCTGTGGATTTAGTAGCTGGAAAGAA 2074 ||||| ||||||| || ||| |||||||||||||||||||||||||| |||| ||| Sbjct 1984 TGATCTAGGGGAGTCCTACAAGTTCATCGATGTGCCTGTGGATTTAGTAGCGGGAAGGAA 2043 Query 2075 AGACAAAGTGATTAGACCTTCAATGGTTAGGAAACATTACAGGGTGATGAGAGATTCAGG 2134 ||||| |||||| | |||| ||||| | |||||| |||| |||||||||||| | | Sbjct 2044 TGACAAGGTGATTCGGTCTTCCATGGTGAAGAAACACTACAATGTGATGAGAGATGCCG- 2102 Query 2135 AG-TAGATGTTTC-TTACAATGAGTTTGAGTATGCTCAT-TTGGATTTTACCTTCTCTCA 2191 || | ||||| || || |||||||||||||||||||| ||| |||| || ||||| || Sbjct 2103 AGGTCGATGTATCGTTT-AATGAGTTTGAGTATGCTCACCTTG-ATTTCACATTCTCCCA 2160 Query 2192 CCGTGAAGAGCTTTTG-GCGTATGTGATGTCGCGG 2225 ||| |||||||||||| | ||||| ||||||||| Sbjct 2161 CCGCGAAGAGCTTTTGAGA-TATGTAATGTCGCGG 2194 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 92711656330 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5