BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G18910.1
Length=4064
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472116 jgi|Araly1|472116|fgenesh2_kg.1__2070__AT1G18910.1 3267 0.0
> Ahg472116 jgi|Araly1|472116|fgenesh2_kg.1__2070__AT1G18910.1
Length=3998
Score = 3267 bits (1769), Expect = 0.0
Identities = 2084/2233 (93%), Gaps = 34/2233 (2%)
Strand=Plus/Plus
Query 1830 ATGGATCCACCTGC-TGGTTACATGAATGAGACACCTTACTCAAGTGCGATGAATCAGCA 1888
|||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1795 ATGGATCCACCT-CTTGGTTACATGAATGAAACACCTTACTCGAGTGCGATGAATCAGCA 1853
Query 1889 AATACTTATCCCAGGAAAGCTCAGGCCACTTCTGCATCTTCCTGATCTTTTTGGTGACAA 1948
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 1854 AATACTTATCCCAGGAAAGCTCAGGCCACTTCAACATCTTCCTGATATTTTTGGTGACAA 1913
Query 1949 GACTATTGGTGAACACTTAACTATGGACTTGAAACCAATCGATCTGATTTTCTACTTCCA 2008
|| |||||| || ||||||| |||||| ||||||||||||||||||||||||| ||||||
Sbjct 1914 GAATATTGGAGAGCACTTAAATATGGATTTGAAACCAATCGATCTGATTTTCTTCTTCCA 1973
Query 2009 CAAGGCAATGAAGAAAGATCTAGACTACCTTGTACGTGGTTCAGCTCGGCTCGCAACAGA 2068
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1974 CAAGGCAATGAAGAAAGATCTAGACTACCTTGTATGTGGTTCAGCTCGGCTCGCAACAGA 2033
Query 2069 TTATAGCTTCCTTGGAGAATTTCAACAGCGGTTTCATCTTATAAAGTTCTTGTATCAGAT 2128
|| ||||||||| || || ||||| |||||||||||||||||||||||||||||||| ||
Sbjct 2034 TTGTAGCTTCCTCGGGGAGTTTCATCAGCGGTTTCATCTTATAAAGTTCTTGTATCAAAT 2093
Query 2129 ACATTCAGATGCAGAAGATGAGATTGCATTTCCAGCTTTGGAGGCAAAGGGTAAACTACA 2188
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2094 TCACTCAGATGCAGAAGATGAGATTGCATTTCCAGCCTTGGAGGCAAAGGGTAAACTACA 2153
Query 2189 AAACATTAGTCAGTCATACAGTATCGATCACGAACTCGAAGTTGAGCACCTCAATAAAGT 2248
|||||||||||||||||||||||| ||||||||||| ||||| || |||||| | |||||
Sbjct 2154 AAACATTAGTCAGTCATACAGTATTGATCACGAACTGGAAGTCGAACACCTCGACAAAGT 2213
Query 2249 ATCATTCCTTTTGAATGAGTTGGCAGAATTGAACATGCTGGTACTAGACCACAAGAATGT 2308
||||||||||||||||||| |||| |||||||| ||| ||||||| ||| ||||||||||
Sbjct 2214 ATCATTCCTTTTGAATGAGATGGCTGAATTGAAGATGTTGGTACTGGACAACAAGAATGT 2273
Query 2309 GAAGTATGAGAAGTTGTGTATGAGCCTCCAGGATATATGCAAATCCATTCACAAGCTATT 2368
||||||||||||||||||||||||||| || |||||||||||||||||||| |||||| |
Sbjct 2274 GAAGTATGAGAAGTTGTGTATGAGCCTTCAAGATATATGCAAATCCATTCATAAGCTACT 2333
Query 2369 GTCTGAGCATCTCCACCGAGAAGAAACTGAGCTTTGGTGTTTATTCAGAGACTGCTTCAC 2428
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2334 GTCTGAGCATCTCCACCGAGAAGAAACTGAGCTCTGGTGTTTATTCAGAGACTGCTTCAC 2393
Query 2429 TATTGAAGAACAAGAAAAGATCATAGCATGCATGCTTGGAAGAATAAGTGGAGAAATATT 2488
||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 2394 TATTGCAGAACAAGAAAAAATCATAGCATCCATGCTTGGAAGAATAAGTGGAGAAATATT 2453
Query 2489 GCAAGATATGATTCCATGGCTAATGGAATCTTTGATCCCTGATGAACAACATGCTGTGAT 2548
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2454 GCAAGATATGATTCCATGGTTAATGGAATCTTTGATCCCTGATGAACAACATGCTGTGAT 2513
Query 2549 GTCCTTGTGGAGACAAGCAACAAGGAAAACTATGTTTGGTGAATGGCTAACAGAATGGTA 2608
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2514 GTCCCTGTGGCGACAAGCAACAAGGAAAACTATGTTTGGTGAATGGCTAACAGAATGGTA 2573
Query 2609 CAATTCTCATGCTGTCGAGGAGGAAACAGAGGAAGCAAATAAGGATCCATCTGAGAATTC 2668
||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 2574 CAATTCTCATGTTGTAGAAGAGGAAACAGAGGAAGCAAATAAGGATCCATCTGAGAATTC 2633
Query 2669 AGATCCATTAGACGTTGTCTGGAGTTATCTCTTTGAAGGAGCTGCTGATGAGTACAAAGG 2728
|||||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||
Sbjct 2634 AGATCCATTAGATATTGTTTGGAGTTATCTCGTTGAAGGAGCTGCTGATGAGGACAAAGT 2693
Query 2729 GAGCATTTGCAGCAAACCTCTGGAAGAGACAGAGTTAAAAGGTATCATGAATAAGCCTCT 2788
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||
Sbjct 2694 GAGCATTTGCAGCAAACCTCTAGAAGAGACAGAGTTAAAAGGTCTCATGAATAAGCCACT 2753
Query 2789 TGGAAAGGCTGCTCCTAATAACAAGGTAGAATTTGGAAACAAAGAGGAGAATCATCTTGA 2848
|||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 2754 TGGAAATGCTTCTCCTAATAACAAGGGAGAATTTGGAAACAAAGAGGAGAATCATCGGGA 2813
Query 2849 GATCTCAGGAAGTAAAAAGGTGTGTACAGGAGCTGATGAAACGAAGTACAAAGAACAAAC 2908
|| |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 2814 AATTTCAGAAAGTAAAAAGGTATGTACAGGAGCTGATGAAAGGAAGTACAAAGAACAAAC 2873
Query 2909 TGACAGCAACGCGCAAGCTTTTCAGATGTCGCATAATACTAGCCAATCTGGCCAAGACAG 2968
||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||
Sbjct 2874 TGACAGCAACGCGCAAGCTTTTCAGATGTTGCAGAATACTAGCCAATCTGGCCATGACAG 2933
Query 2969 TAGATATGAGTGTC-TGTTATCAATGAGTCAAGAGGATGTGGAAGCTACAATTCGAAGAA 3027
|||||||||||| | ||||||||||||||||||| |||||||| || |||||| ||||||
Sbjct 2934 TAGATATGAGTG-CTTGTTATCAATGAGTCAAGAAGATGTGGAGGCCACAATTAGAAGAA 2992
Query 3028 TATCTCGAGATTCTTCCCTGGATCCTCAGAAGAAATCGTATATCATTCAAAACTTGTTAA 3087
||||||| || ||| ||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct 2993 TATCTCGCGACTCTGCCCTGGATCCTCAAAAGAAATCATATATCATCCAAAACTTGTTAA 3052
Query 3088 TGAGCCGTTGGATTGCTACACAACGGATATATAATCTTGAACCATCCATTCTCTCAAGCA 3147
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3053 TGAGCCGTTGGATTGCTACACAACGGATATACAATCTTGAACCATCCATTCTCTCAAGCA 3112
Query 3148 ATAGGGAAGCAGTTCCGGGGCAGAATCCATCTTATCGAGATCCTCACAAACTGATCTTTG 3207
|||||||||||||||| || |||||||||||||||||||||||||||||| |||| ||||
Sbjct 3113 ATAGGGAAGCAGTTCCTGGTCAGAATCCATCTTATCGAGATCCTCACAAATTGATATTTG 3172
Query 3208 GTTGCAAACACTACAAGAGAAGTTGCAAACTTCTTGCTCCTTGTTGCAACAAGCTCTACA 3267
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 3173 GTTGCAAACACTACAAGAGAAGTTGCAAGCTTCTTGCTCCGTGTTGCAACAAGCTCTACA 3232
Query 3268 CATGTATACGATGCCATGATGAAGAGGTTGATCACTTATTGGATAGAAAACAGATCACAA 3327
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3233 CGTGTATACGATGCCATGATGAAGAGGTTGATCACTTATTGGATAGAAAACAGATCACAA 3292
Query 3328 AGATGATGTGCATGAAATGCATGATAATTCAGCCAGTAGGTGCTAGTTGCTCAAATATTT 3387
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3293 AGATGATGTGCATGAAGTGCATGATAATTCAGCCAGTAGGTGCTAGTTGCTCAAATACTT 3352
Query 3388 CATGTAGTTCATCAATGGGAAAATATTACTGTAAAATATGCAAGTTGTTTGACGATGATA 3447
|||| | |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 3353 CATGCAATTCATCGATGGGAAAATACTACTGCAAAATATGCAAGTTGTTTGACGATGATA 3412
Query 3448 GGGAAATCTATCATTGTCCATACTGCAATCTCTGCCGGCTAGGAAAAGGACTGAGCATAG 3507
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3413 GGGAAATCTATCATTGTCCATACTGCAATCTCTGCCGGCTAGGAAAAGGACTGAGCATTG 3472
Query 3508 ACTACTTTCATTGCATGAAATGTAATGCTTGTATGTCGCGA-CTCATAGTAGAACATGTA 3566
|||||||||||||||||||||| || ||||||||||||||| | | ||||||||||||||
Sbjct 3473 ACTACTTTCATTGCATGAAATGCAACGCTTGTATGTCGCGAAC-CTTAGTAGAACATGTA 3531
Query 3567 TGCAGAGAAAAGTGCTTAGAAGATAATTGTCCGATTTGTCATGAATACATATTTACCTCA 3626
||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 3532 TGCAGAGAAAAGTGCTTAGAAGATAATTGCCCCATTTGTCATGAATACATATTTACCTCG 3591
Query 3627 AATTCTCCGGTGAAGGCTCTTCCATGCGGTCACGTGATGCATTCAACATGCTTTCAGGAG 3686
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3592 AATTCTCCGGTGAAAGCTCTTCCATGCGGTCACGTGATGCATTCGACATGCTTTCAGGAG 3651
Query 3687 TACACATGTTCGCATTACACATGCCCTATTTGCAGCAAGTCGCTCGGGGATATGCAGGTT 3746
||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct 3652 TACACATGTTCGCATTACACATGCCCTATTTGCAGCAAGTCACTTGGAGATATGCAGGTT 3711
Query 3747 TACTTTAGAATGTTAGACGCACTGCTTGCAGAACAAAAGATGCCAGATGAATACTTAAAC 3806
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 3712 TACTTTAGAATGTTAGACGCACTGCTCGCAGAACTAAAGATGCCAGATGAATACTTAAAC 3771
Query 3807 CAAACTCAGGTAATACTGTGTAATGACTGTG-GAAGAAAGGGGAATGCTCCTTACCATTG 3865
||||||||||||||||| |||||||| |||| || ||||||| |||||||||||||||||
Sbjct 3772 CAAACTCAGGTAATACTATGTAATGATTGTGAGA-GAAAGGGAAATGCTCCTTACCATTG 3830
Query 3866 GCTCTATCACAAGTGTTCTTCTTGTGCCTCCTACAACACCAGACTTTTCTAGTTCC-TTC 3924
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3831 GCTCTATCACAAGTGCTCTTCTTGTGCCTCCTACAACACCAGACTTTTCTAGTTCCATTC 3890
Query 3925 TCCAAttttccttctttgttttcttctttgtacatctgcaaatcttttaacaagtttttc 3984
||||||||||||||||||| ||| | | | | || | |||| | |
Sbjct 3891 TCCAATTTTCCTTCTTTGT---CTT-T----A-A-C---AA-T-TTTT------T----C 3925
Query 3985 ttttctttttGGAAGCATTTGATTTTGTATGaaaaaaaaTACTCTACATATTATTAAATC 4044
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 3926 TTTTCTTTTTGGAAGCATTTGATTTTGTATGAAAGAAAATATTCTACATATTATTAAATC 3985
Query 4045 TAGATAATTGTTT 4057
||||| |||||||
Sbjct 3986 TAGATGATTGTTT 3998
Score = 2438 bits (1320), Expect = 0.0
Identities = 1580/1704 (93%), Gaps = 23/1704 (1%)
Strand=Plus/Plus
Query 128 CCACCTCCTCTCCTGTTCATGGTGGATGGGAGTCGGAGATCCTCTTCCACTTCCGCCGGA 187
||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 75 CCACCTCCTCTCCTGTTTATGGTGGATGGGAGTTGGATATCCTCTTCCACTTCCGCCGGA 134
Query 188 AAAGAACCGTCGGGAGGTTAATAAACCGCCGGATATTGCGTCGACTTCCTCCTCCTCCGC 247
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 135 CAAGAACCGTCGGGAGGTTAATAAACCGCCGGATATTGCGTCGACTTCTTCCTCCTCCGC 194
Query 248 TTCGGCGGTGAATAATGCTCGGTTGTCCGATGCTCCGATTCTTTTGTTTGTTTATTTCCA 307
|||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 195 TTCGGCGGTG---AATGCTCGGTTGTCCGATGCTCCCATTCTTTTGTTTGTTTACTTCCA 251
Query 308 TAAGGCTTTCCGTGCGCAGCTAGCGGAGCTCCAGTTTCTGGCCGGTGATACAGTCCGGTC 367
|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 252 CAAGGCTTTCCGTGCGCAGCTAGCGGAGCTCCACTTTCTGGCCGGTGATACCGTCCGGTC 311
Query 368 CGGTTCTGATCTGGCCGTGGAGCTCCGCTCTAAGTTTGAGTTTCTTAAGCTTGTATATAA 427
|||||| ||||| || ||||||||||| ||||||||||| |||||| |||||||||||||
Sbjct 312 CGGTTCCGATCTAGCGGTGGAGCTCCGGTCTAAGTTTGATTTTCTTCAGCTTGTATATAA 371
Query 428 GTATCATTCCGCAGCTGAAGATGAGGTTATATTTTCAGCGTTGGACACTCGTGTGAAGAA 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 372 GTATCATTCCGCAGCTGAAGATGAGGTTATATTTTCAGCGTTGGACACTCGTGTGAAGAA 431
Query 488 CATTGTTTTTAATTACTCGCTTGAACATGATGCCACAGATGATCTTTTCACTTCAGTTTT 547
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 432 CATTGTTTTCAATTACTCGCTTGAACATGATGCCACAGATGATCTTTTCACTTCTGTTTT 491
Query 548 TCATTGGCTGAATGTTCTTGAAGAGGAACAAGGGAACAGAGCCGATGTACTTCGTGAAGT 607
||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 492 TCATTGGCTAAATGTTCTTGAAGAGGAAAAAGGGAACAGAGCCCATGTACTTCGTGAAGT 551
Query 608 TGTTTTATGCATTGGAACCATTCAGTCATCCATATGTCAACATATGCTTAAAGAAGAACG 667
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 552 TGTTTTATGCATTGGCACCATTCAGTCATCCATATGTCAACATATGCTTAAAGAAGAGCG 611
Query 668 ACAGGTGTTTCCTTTGATGATTGAGAACTTCTCCTTTGAAGAACAGGCATCGTTAGTGTG 727
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 612 GCAGGTGTTTCCTTTGATGATTGAGAACTTCTCCTTTGAAGAACAGGCATCGTTAGTGTG 671
Query 728 GCAATTCATTTGTAGTGTTCCAGTGATGGTGCTGGAAGAGATTTTCCCATGGATGACGTC 787
||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||
Sbjct 672 GCAGTTCATTTGTAGTGTTCCAGTGATGGTGTTGGAAGAAATTTTCCCATGGCTGACGTC 731
Query 788 TTTACTCTCTCCCAAGGAGAAATCTGAAGTTGAGACTTGCT-TCAAAGAAGTTGTCCCAA 846
||||||||||||||||||||||||||||||||||| ||| | | ||||||||||||||||
Sbjct 732 TTTACTCTCTCCCAAGGAGAAATCTGAAGTTGAGAATTG-TGTGAAAGAAGTTGTCCCAA 790
Query 847 ATGAACTCTCTTTGCAACTGGTCATAAACTCTTGGCT-GATTGATGACAGTCAATCTTCT 905
| ||| || | ||||||||||| |||||||||||||| | ||||||| | || |||||||
Sbjct 791 AAGAAGTCACCTTGCAACTGGTTATAAACTCTTGGCTAG-TTGATGATATTCCATCTTCT 849
Query 906 TTGACGGCTCTTACAAAGATTATGAAAGGAGTTCAGTCTGTAGAAGTGTCTGAAAATATG 965
|||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||
Sbjct 850 TTGACGGCTCTTACAAAGATCATGAAAGGAGTCCAGTATGTAGAAGTGTCTGAAAATATG 909
Query 966 ACCAACTCTCAGACAAATTCATCATCAAGTGGTG-TGTTTCAACGTTTTTGGCAGTGGAG 1024
| ||||||| | ||||||| ||||| | |||||||||||||||||||||||||
Sbjct 910 AACAACTCT--------T-CATCATCGAGTGG-GATGTTTCAACGTTTTTGGCAGTGGAG 959
Query 1025 TaaaaaaaTGTCTTTTTCTAGTCCAAATACAGGACACATTTTGGTTCATGGTATCCATCT 1084
||||| |||| ||||||||||||||||||||||| | |||||||||||||||||| ||
Sbjct 960 TAAAA---TGTCATTTTCTAGTCCAAATACAGGACATACTTTGGTTCATGGTATCCAGCT 1016
Query 1085 TTGGCATAATGCAATTAGAAAAGATTTGGTAGACATTCAAAAAGGACTATGCCAATTGAC 1144
||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||
Sbjct 1017 TTGGCATAATGCAATAAAAAAAGATTTGGTAGACATTCAAAAAGGATTATGCCAATTGAC 1076
Query 1145 ATTTCCAAGCCTTTCATTGGACCTCAATGTTCTGGTGGTTCGGCTAAACTTCCTTGCTGA 1204
||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1077 ATTTCCAAGCCTTTCGTTGGACCTCAATGTGCTCGTGGTTCGGCTAAACTTCCTTGCTGA 1136
Query 1205 TGTCCTTATCTTTTATAGCAATGCATTTAAGACGTTCTTTTACCCAGTGTTTGAAGATAT 1264
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||
Sbjct 1137 TGTCCTTATCTTTTATAGCAATGCATCAAAGAAGTTCTTTTACCCAGTGTTTGAAGAAAT 1196
Query 1265 GGTGGATCAACAACACTCTTCCTCTTCCAAACAATTCACCATAGATGGAC-ATGTGGAAA 1323
||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct 1197 GGTGGATCAACAACACTCTTCCTTTTCCAAACAATCCACCATAGATG-ACCATGTGGAAA 1255
Query 1324 ACTTCAAGAAGTCACTAGACCTTGAAACTAGAGCAGGGAGTGACAATTTTGTCATAACCC 1383
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 1256 ACTTCAAGAAGTCACTAGACCTTGAAACTAGAACAGGGAGTGACAATTTTGTCATAACGC 1315
Query 1384 TTCAGGAGAAACTGGAGTCTCTTATATTGACAGTAGCTAAGCAGTTCTCTATAGAGGAAA 1443
||||||||||||||||||| || |||||||||||| | |||||||| |||||||||||||
Sbjct 1316 TTCAGGAGAAACTGGAGTCCCTAATATTGACAGTAACCAAGCAGTTTTCTATAGAGGAAA 1375
Query 1444 CAGAGGTATTCCCGATCATCAGCAAGAACTGCAACATTGAAATGCAGAGGCAACTACTAT 1503
||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 1376 CAGAGGTATTCCCAATCATCAGCAAGAACTGCAACATTGAAATGCACAGGCAACTCCTAT 1435
Query 1504 ATAGAAGCATCCATTTCCTGCCTCTTGGATTGCTTAAGTGTGTCATAATGTGGTTCTCTG 1563
| |||||| | ||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1436 ACAGAAGCCTTCATGTCCTGCCTCTTGGATTACTTAAGTGTGTCATAATGTGGTTCTCTG 1495
Query 1564 CTCAGTTACCAGAAGATGAATGTCAATCAATTATTCACTACTTAAGCTCTGAAGATTCCT 1623
||||||| ||||||||||||||||| ||||||||||||| |||||| || |||||||| |
Sbjct 1496 CTCAGTTGCCAGAAGATGAATGTCACTCAATTATTCACTTCTTAAGTTCGGAAGATTCTT 1555
Query 1624 TTCCCAACAAACCTTTTGCGCACCTCTTGTTGCAGTGGTTTCGCTTCGGTTATTCAGGCA 1683
||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1556 TTCTGAATAAACCTTTTGCACACCTCTTGTTGCAGTGGTTTCGCTTCGGTTATTCTGGCA 1615
Query 1684 AAACACCAGTTGAAAGTTTCTGGAATGAGCTGTCCTTTATGTTCAAACCAAGATGTTCTT 1743
|||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1616 AAACGCCAGTTGAAAGTTTCTGGAATGAGCTTTCCTTTATGTTCAAACCGAGATGTTCCG 1675
Query 1744 TTGAAGAGGAACTCACTGAAGAAGCTTCTGGATCTTTCTTTCAACAATCACCGCAGAAAC 1803
|||||||||||| ||||||||||||||||||||||||| | || ||||||| || | |||
Sbjct 1676 TTGAAGAGGAACACACTGAAGAAGCTTCTGGATCTTTCGTCCATCAATCACAGCCGCAAC 1735
Query 1804 TATTCAAAGTATCCGATCCCTATT 1827
||| ||||| ||| ||||| ||||
Sbjct 1736 TATGCAAAGGATCTGATCCTTATT 1759
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 153638422201
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5