BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G23190.1
Length=2112
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472576 jgi|Araly1|472576|fgenesh2_kg.1__2530__AT1G23190.1 3190 0.0
Ahg926404 jgi|Araly1|926404|scaffold_201965.1 2001 0.0
> Ahg472576 jgi|Araly1|472576|fgenesh2_kg.1__2530__AT1G23190.1
Length=2087
Score = 3190 bits (1727), Expect = 0.0
Identities = 1959/2068 (95%), Gaps = 27/2068 (1%)
Strand=Plus/Plus
Query 47 AATTTTGATCTTTGTTCTTC-TCAAAG-CGAATATGGTTTTCAAGGTTTCTACCGTATCC 104
||||||||||||||||| || || ||| |||||||||||||||||||||||||||| ||
Sbjct 3 AATTTTGATCTTTGTTC-TCTTC-AAGACGAATATGGTTTTCAAGGTTTCTACCGTTTCA 60
Query 105 ACATCTCCTATTGATGGCCAGAAACCAGGAACTTCTGGTCTTCGTAAGAAGGTGAAAGTG 164
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 61 ACATCTCCTATTGATGGCCAGAAACCAGGAACTTCTGGTCTCCGTAAGAAGGTGAAAGTG 120
Query 165 TTCAAGCAACCCAATTATCTAGAGAATTTTGTCCAAGCAACATTCAATGCTCTTACGGCG 224
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 121 TTCAAGCAACCCAATTATCTAGAGAATTTTGTGCAAGCAACATTCAATGCTCTTACGGCG 180
Query 225 GAGAAAGTTAAAGGTGCCACACTTGTGGTCTCTGGTGATGGTCGTTATTACTCAAAGGAT 284
|||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct 181 CAGAAGGTTAAAGGTGCCACTCTTGTGGTCTCCGGTGATGGTCGTTATTATTCAAAGGAT 240
Query 285 GCTGTTCAGATCATAATTAAGATGGCAGCAGCTAATGGTGTAC-GACGTGTGTGGGTTGG 343
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 241 GCTGTTCAGATCATAATTAAGATGGCAGCAGCTAATGGTGTACGGA-GTGTGTGGGTTGG 299
Query 344 TAAAAACACTCTGTTATCAACTCCTGCTGTATCAGCTGTGATTCGTGAAAGATCAGGGGC 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 TAAAAACACTCTGTTATCAACTCCTGCTGTATCAGCTGTGATTCGTGAAAGATCAGGGGC 359
Query 404 TGATGGATCGAAAGCAACTGGAGCATTTATCTTAACAGCAAGCCACAATCCTGGTGGCCC 463
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 360 TGATGGATCGAAAGCAACTGGAGCCTTTATCTTAACAGCAAGTCACAATCCTGGTGGCCC 419
Query 464 TACTGAGGATTTTGGAATCAAATACAATATGGAAAATGGAGGACCTGCTCCTGAATCAAT 523
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 420 TACTGAGGATTTTGGAATCAAATACAATATGGAAAACGGAGGACCTGCTCCTGAATCAAT 479
Query 524 CACTGATAAAATTTACGAGAACACTAAGACAATCAAGGAGTACCCAATAGCACAAGATCT 583
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 480 CACTGATAAAATTTACGAGAACACTAAGACAATCAAGGAGTACCCAATAGCAGACGATCT 539
Query 584 ACCCAATGTTGATATTTCTGCTGTTGGTGTAACCAGTTTTGAAGGACCTGAAGGAAAATT 643
||||||||||||||||||| | | |||||||| || |||||||||||||| || |||||
Sbjct 540 ACCCAATGTTGATATTTCTACCATCGGTGTAACTAGCTTTGAAGGACCTGATGGCAAATT 599
Query 644 TGATGTTGAAGTTTTTGATC-CCGCAGATGACTACGTTAAATTAATGAAGTCAATCTTCG 702
||||||||||||||| || | | |||||||||||||||||||| ||||||||||||||||
Sbjct 600 TGATGTTGAAGTTTTCGA-CTCTGCAGATGACTACGTTAAATTGATGAAGTCAATCTTCG 658
Query 703 ATTTTGAAGCCATCCGGAAATTGCTATCATCTCCAAAGTTTACATTCTGCTATGATGCAT 762
|||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 659 ATTTTGAATCAATCCGGAAATTGCTTTCATCTCCAAAGTTTACATTCTGCTATGATGCAT 718
Query 763 TGCATGGAGTTGCTGGAGCCTATGCACATCGCATCTTTGTCGAAGAACTCGGTGCGCAAG 822
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 719 TGCATGGAGTTGCTGGAGCCTATGCACATCGCATTTTTGTCGAAGAACTCGGTGCGCAAG 778
Query 823 AAAGCGCATTATTGAACTGCACTCCCAAGGAGGACTTTGGAGGAGGGCATCCGGATCCCA 882
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 779 AAAGCGCATTATTGAACTGCACACCCAAGGAGGACTTTGGAGGAGGGCATCCGGATCCCA 838
Query 883 ATTTGACCTATGCTAAGGAGCTTGTGGCACGAATGGGATTAGGTAAATCCGACACTGGAG 942
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 839 ATTTGACCTATGCTAAGGAGCTTGTGGCACGAATGGGACTAAGTAAATCCGACACTGGAG 898
Query 943 GTGAACCTCCAGAGTTTGGCGCCGCTGCTGATGGTGATGCAGACCGTAACATGATCCTTG 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GTGAACCTCCAGAGTTTGGCGCCGCTGCTGATGGTGATGCAGACCGTAACATGATCCTTG 958
Query 1003 GTAAAAGGTTCTTTGTAACTCCTTCGGATTCAGTTGCCATAATTGCTGCAAATGCTATTG 1062
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 959 GTAAAAGGTTTTTTGTAACTCCTTCAGATTCAGTTGCCATAATTGCTGCAAATGCTATTG 1018
Query 1063 GTGCCATCCCGTACTTCAGCTCTGGTTTGAAAGGTGTTGCAAGGAGCATGCCAACCTCAG 1122
| ||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 1019 GGGCCATTCCGTACTTCAGCTCTGGTTTGAAAGGTGTTGCTAGGAGTATGCCCACCTCAG 1078
Query 1123 CTGCTCTTGATGTCGTTGCAAAAAGCTTGAATTTGAAGTTCTTTGAGGTTCCAACAGGCT 1182
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 CTGCTCTCGATGTCGTTGCAAAAAGCTTGAATTTGAAGTTCTTTGAGGTTCCAACAGGCT 1138
Query 1183 GGAAGTTTTTTGGTAATCTGATGGATGCTGGGATGTGTTCTGTTTGTGGAGAAGAAAGTT 1242
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1139 GGAAGTTTTTTGGTAATCTGATGGATGCTGGGATGTGTTCTGTTTGTGGGGAAGAAAGTT 1198
Query 1243 TTGGAACTGGCTCGGATCATATCCGTGAGAAAGACGGAATATGGGCAGTTCTTGCATGGA 1302
||||||| ||||||||||||||||| ||||||||||| || |||||||||||||| ||||
Sbjct 1199 TTGGAACCGGCTCGGATCATATCCGCGAGAAAGACGGGATTTGGGCAGTTCTTGCGTGGA 1258
Query 1303 TGTCTATACTTGCTCACAAGAACAAGGGAAATATTGACGGTAACGCTAAACTGGTGTCAG 1362
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1259 TGTCCATACTTGCTCACAAGAACAAGGGAAATATTGACGGTAATGCTAAACTGGTGTCGG 1318
Query 1363 TTGAAGACATTGTCCGCCAGCATTGGGCTACCTACGGTCGTCACTATTACACTCGTTACG 1422
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1319 TTGAAGACATTGTCCGCCAGCATTGGGCTACCTACGGCCGTCACTATTACACTCGTTACG 1378
Query 1423 ACTATGAGAATGTAGACGCAGGTAAAGCTAAGGAACTGATGGAGCATTTGGTCAAATTGC 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 ACTATGAGAATGTAGACGCAGGTAAAGCTAAGGAACTGATGGAGCATTTGGTCAAATTGC 1438
Query 1483 AATCTTCAATTCCTGAAGTTAACAAGATTGTGAAAGGAATTCGTTCGGACGTGGC-AAGC 1541
|||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |
Sbjct 1439 AATCTTCAATTCCTGAAGTTAACAAGATTGTGAAAGGAATTCGTTCCGATGTGGCGAA-C 1497
Query 1542 GTCGCCAGTGCTGATGAATTCGAGTACAAAGATCCAGTTGATGGATCCATTTCGAAGCAC 1601
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498 GTCGCCGGTGCCGATGAATTCGAGTACAAAGATCCAGTTGATGGATCCATTTCGAAGCAC 1557
Query 1602 CAGGGAATCCGTTACTTGTTTGAAGACGGATCACGACTTGTTTTCCGTCTCTCTGGAACT 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 CAGGGAATCCGTTACTTGTTTGAAGACGGATCACGACTTGTTTTCCGTCTCTCTGGAACT 1617
Query 1662 GGCTCAGAAGGAGCAACCATCCGGCTTTACATCGAACAGTACGAAAAGGATGCTTCAAAA 1721
||||||||||||||||||||| |||| ||||| ||||||||||| |||||||||||||||
Sbjct 1618 GGCTCAGAAGGAGCAACCATCAGGCTCTACATTGAACAGTACGAGAAGGATGCTTCAAAA 1677
Query 1722 ACCGGCCGAGAATCCCAGGAAGCTTTGTCTCCTCTGGTTGACTTAGCTCTAAAGCTGTCG 1781
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1678 ACCGGCCGAGAATCCCAGGAAGCTTTGTCTCCTCTGGTTGACTTAGCTCTAAAGCTGTCT 1737
Query 1782 AAGATGGAAGAGTTCACAGGCCGATCAGCCCCCACCGTCATAACATAAGAAGGGTCAAGC 1841
|||||||| |||||||| |||||||||||||| ||||||||||||| |||| ||||||||
Sbjct 1738 AAGATGGAGGAGTTCACCGGCCGATCAGCCCCAACCGTCATAACATGAGAATGGTCAAGC 1797
Query 1842 TCAACGACTCAAACCATTCACCTTTT---C--G--TCTATATGATGTTTTCTTCTTATAC 1894
|||||||||| || ||| ||| |||| | | ||||||||||| |||||||||||||
Sbjct 1798 TCAACGACTCGAATCATACACTTTTTTTTCCTGCATCTATATGATGCTTTCTTCTTATAC 1857
Query 1895 TATCCAAGTTACATTATAAGAATAATTAGTCTCAGGGAGAATTTGTATTTCTCATCAGAA 1954
|||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||| |||
Sbjct 1858 TATCCAAGTTCCATTGTAAGAATAATTAGTCTCAGGGAGAATTTGTATCTCTTATCGGAA 1917
Query 1955 TTCTGAACAACCAAGA-CTGATTTCTTGAGTTGTTGTGAGGCTTATAC-T--T-GTACGG 2009
|||||||||||||||| | ||||||||||||||| ||||||||||||| | | ||||||
Sbjct 1918 TTCTGAACAACCAAGAAC-GATTTCTTGAGTTGTCGTGAGGCTTATACATACTTGTACGG 1976
Query 2010 ATTTGGCTTTCTCAGTTTTGTTCTCTCTTGTTTCCGTATTTTGGCGAGT---ATACTCTC 2066
||||||||||||| |||||||| |||||||||||| | |||||||| || ||| ||||
Sbjct 1977 ATTTGGCTTTCTCGGTTTTGTTTTCTCTTGTTTCCATCTTTTGGCG-GTTTTATATTCTC 2035
Query 2067 TTAACATCTAAGTTCATTGATACCTCAA 2094
||||||||||| |||||||||||||||
Sbjct 2036 TTAACATCTAACCTCATTGATACCTCAA 2063
> Ahg926404 jgi|Araly1|926404|scaffold_201965.1
Length=1798
Score = 2001 bits (1083), Expect = 0.0
Identities = 1541/1763 (87%), Gaps = 27/1763 (2%)
Strand=Plus/Plus
Query 84 TTCAAGGTTTCTACCGTATCCACATCTCCTATTGATGGCCAGAAACCAGGAACTTCTGGT 143
|||||||| ||| || || || || |||||||||||||||||||| |||||||||||
Sbjct 30 TTCAAGGTCTCTGTAGTCTCTACTTCACCTATTGATGGCCAGAAACCTGGAACTTCTGGA 89
Query 144 CTTCGTAAGAAGGTGAAAGTGTTCAAGCAACCCAATTATCTAGAGAATTTTGTCCAAGCA 203
|| ||||||||||||| |||||| |||||||| ||||| || || |||||||| || |||
Sbjct 90 CTCCGTAAGAAGGTGAGAGTGTTTAAGCAACCAAATTACCTTGAAAATTTTGTTCAGGCA 149
Query 204 ACATTCAATGCTCTTACGGCGGAGAAAGTTAAAGGTGCCACACTTGTGGTCTCTGGTGAT 263
|| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct 150 ACGTTCAATGCTCTTACTCCTGAGAAAGTTAAAGGTGCGACACTTGTGGTCTCTGGTGAT 209
Query 264 GGTCGTTATTACTCAAAGGATGCTGTTCAGATCATAATTAAGATGGCAGCAGCTAATGGT 323
||||||||||| ||| || | ||| ||||||| ||| ||||||||||||| |||||||||
Sbjct 210 GGTCGTTATTATTCAGAGCAAGCTATTCAGATTATAGTTAAGATGGCAGCGGCTAATGGT 269
Query 324 G-TACGACGTGTGTGGGTTGGTAAAAACACTCTGTTATCAACTCCTGCTGTATCAGCTGT 382
| || |||| |||||||||||| |||||| |||| ||||||||||||||||||||||| |
Sbjct 270 GTTA-GACGCGTGTGGGTTGGTCAAAACAGTCTGCTATCAACTCCTGCTGTATCAGCTAT 328
Query 383 GATTCGTGAAAGA-TCAGGGGCTGATGGATCGAAAGCAACTGGAGCATTTATCTTAACAG 441
|| ||||||||| | ||||||||||||||| ||||| || ||||||||||| |||||||
Sbjct 329 TATCCGTGAAAGAGT-AGGGGCTGATGGATCTAAAGCCACCGGAGCATTTATATTAACAG 387
Query 442 CAAGCCACAATCCTGGTGGCCCTACTGAGGATTTTGGAATCAAATACAATATGGAAAATG 501
|||| || |||||||||||||| ||||||||||| ||||| || ||||||||||||||||
Sbjct 388 CAAGTCATAATCCTGGTGGCCCAACTGAGGATTTCGGAATTAAGTACAATATGGAAAATG 447
Query 502 GAGGACCTGCTCCTGAATCAATCACTGATAAAATTTACGAGAACACTAAGACAATCAAGG 561
| ||||| |||||||||||||| || ||||| |||||||||||||| |||||||||||||
Sbjct 448 GTGGACCAGCTCCTGAATCAATTACAGATAAGATTTACGAGAACACAAAGACAATCAAGG 507
Query 562 AGTACCCAATAGCACAAGATCTACCCAATGTTGATATTTCTGCTGTTGGTGTAACCAGTT 621
||||||||||||| |||||||||||| |||||||||||| | | ||| ||||||| |
Sbjct 508 AGTACCCAATAGCGGAAGATCTACCCAGGGTTGATATTTCTACCATAGGTATAACCAGCT 567
Query 622 TTGAAGGACCTGAAGGAAAATTTGATGTTGAAGTTTTTGATCCCGCAGATGACTACGTTA 681
|||| |||||||||||||| ||||| || |||||||||||| ||||||||||||| ||||
Sbjct 568 TTGAGGGACCTGAAGGAAAGTTTGACGTCGAAGTTTTTGATTCCGCAGATGACTATGTTA 627
Query 682 AATTAATGAAGTCAATCTTCGATTTTGAAGCCATCCGGAAATTGCTATCATCTCCAAAGT 741
|| ||||||||||||||||||| |||||| ||||| |||||||||||| |||||||| |
Sbjct 628 AACTAATGAAGTCAATCTTCGACTTTGAATCCATCAAGAAATTGCTATCGTCTCCAAAAT 687
Query 742 TTACATTCTGCTATGATGCATTGCATGGAGTTGCTGGAGCCTATGCACATCGCATCTTTG 801
|||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 688 TTACGTTCTGCTATGATGCATTGCATGGAGTGGCTGGAGCCTATGCACACCGCATCTTTG 747
Query 802 TCGAAGAACTCGGTGCGCAAGAAAGCGCATTATTGAACTGCACT-CCCAAGGAGGACTTT 860
|||||||||| ||||| |||||||| | || ||||||||| | |||||||||||||||
Sbjct 748 TCGAAGAACTAGGTGCACAAGAAAGTTCGTTGTTGAACTGC-GTACCCAAGGAGGACTTT 806
Query 861 GGAGGAGGGCATCCGGATCCCAAT-TTGACCTATGCTAAGGAGCTTGTGGCACGAATGGG 919
|||||||| ||||||||||||||| || |||||||||||||||||||||||||| |||||
Sbjct 807 GGAGGAGGCCATCCGGATCCCAATCTT-ACCTATGCTAAGGAGCTTGTGGCACGCATGGG 865
Query 920 ATTAG-GTAAATCCGAC-A--CTGGAGGTGAACCTCCAGAGTTTGGCGCCGCTGCTGATG 975
||| | ||||| | ||| | | ||||| || ||||||||||||||||||||||||||||
Sbjct 866 ATT-GAGTAAAACTGACGATGCCGGAGGCGAGCCTCCAGAGTTTGGCGCCGCTGCTGATG 924
Query 976 GTGATGCAGACCGTAACATGATCCTTGGTAAAAGGTTCTTT-GTAACTCCTTCGGATTCA 1034
||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 925 GTGATGCAGACCGAAACATGATCCTTGGTAAAAGGTT-TTTCGTAACTCCTTCGGATTCA 983
Query 1035 GTTGCCATAATTGCTGCAAATGCTATTGGTGCCATCCCGTACTTCAGCTCTGGTTTGAAA 1094
|||||||||||||||||||||||| |||| ||||| || |||||||||||||||||||||
Sbjct 984 GTTGCCATAATTGCTGCAAATGCTGTTGGGGCCATACCATACTTCAGCTCTGGTTTGAAA 1043
Query 1095 GGTGTTGCAAGGAGCATGCCAACCTCAGCTGCTCTTGATGTCGTTGCAAAAAGCTTGAAT 1154
|||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||| |
Sbjct 1044 GGTGTTGCAAGGAGCATGCCCACCTCAGCTGCCCTTGATGTCGTTGCAAAAAACTTGGGT 1103
Query 1155 TTGAAGTTCTTTGAGGTTCCAACAGGCTGGAAGTTTTTTGGTAATCTGATGGATGCTGGG 1214
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||||||
Sbjct 1104 TTGAAGTTCTTTGAGGTTCCAACAGGCTGGAAATTTTTCGGCAATCTAATGGATGCTGGG 1163
Query 1215 ATGTGTTCTGTTTGTGGAGAAGAAAGTTTTGGAACTGGCTCGGATCATATCCGTGAGAAA 1274
||||| ||||| || ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 1164 ATGTGCTCTGTATGCGGAGAAGAAAGCTTTGGAACTGGTTCGGATCATATCCGTGAGAAA 1223
Query 1275 GACGGAATATGGGCAGTTCTTGCATGGATGTCTATACTTGCTCACAAGAACAAGGGAAAT 1334
|| || || |||||||||||||| ||| | || ||||| |||||||||||||||| |||
Sbjct 1224 GATGGGATCTGGGCAGTTCTTGCTTGGCTATCAATACTGGCTCACAAGAACAAGG-AAAC 1282
Query 1335 A-TTGACGGTAACGCTAAACTGGTGTCAGTTGAAGACATTGTCCGCCAGCATTGGGCTAC 1393
|||| || || || ||||||||| | ||||||||||| ||||||||||| ||||||||
Sbjct 1283 CCTTGATGGGAATGCAAAACTGGTGACGGTTGAAGACATCGTCCGCCAGCACTGGGCTAC 1342
Query 1394 CTACGGTCGTCACTATTACACTCGTTACGACTATGAGAATGTAGACGCAGGTAAAGCTAA 1453
|| || ||||||||||||||||| |||||||||||||| ||||| ||| |||||||||
Sbjct 1343 ATATGGCCGTCACTATTACACTCGATACGACTATGAGAACGTAGATGCAACTAAAGCTAA 1402
Query 1454 GGAACTGATGGAGCAT-TTGGTCAAATTGCAATCTTCAATTCCTGAAGTTAACAAGATTG 1512
||||| |||| || | ||||| || |||||||||||| |||||||||| |||||||||
Sbjct 1403 AGAACTCATGGGGC-TCTTGGTTAAGTTGCAATCTTCACTTCCTGAAGTCAACAAGATTA 1461
Query 1513 TGAAAGG-AATTCGTTCGGACGTGGCAAGCGTCGCCAGTGCTGATGAATTCGAGTACAAA 1571
| ||||| ||||| | |||| || |||| || || || || ||||||||||||||||||
Sbjct 1462 T-AAAGGGAATTCATCCGGAGGTTGCAAATGTTGCAAGCGCAGATGAATTCGAGTACAAA 1520
Query 1572 GATCCAGTTGATGGATCCATTTCGAAGCACCA-GGGAATCCGTTACTTGTTTGAAGACGG 1630
|||||||| ||||| || |||| |||||||| |||| |||| ||||| || ||||| ||
Sbjct 1521 GATCCAGTAGATGGCTCTGTTTCAAAGCACCAAGGGA-TCCGATACTTATTCGAAGATGG 1579
Query 1631 ATCACGACTTGTTTTCCGTCTCTCTGGAACTGGCTCAGAAGGAGCAACCATCCGGCTTTA 1690
|||||||||||| ||||||||||| ||||||||||||||||||||||| || |||| ||
Sbjct 1580 ATCACGACTTGTGTTCCGTCTCTCGGGAACTGGCTCAGAAGGAGCAACAATAAGGCTCTA 1639
Query 1691 CATCGAACAGTACGAAAAGGATGCTTCAAAAACCGGCCGAGAATCCCAGGAAGCT-TTGT 1749
||| |||||||| |||||||| || ||||| | |||||||| || ||||| ||| |||
Sbjct 1640 CATTGAACAGTATGAAAAGGACGCCTCAAAGATTGGCCGAGATTCTCAGGATGCTCTTG- 1698
Query 1750 CTCCTCTGGTTGAC-TTAGCTCTAAAGCTGTCGAAGATGGAAGAGTTCACAGGCCGATCA 1808
||||| ||||||| || ||| ||||||||||||| ||| |||||||||| |||||||||
Sbjct 1699 CTCCTTTGGTTGATGTT-GCTTTAAAGCTGTCGAAAATGCAAGAGTTCACCGGCCGATCA 1757
Query 1809 GCCCCCACCGTCATAACATAAGA 1831
| || || || || ||||||||
Sbjct 1758 TCACCAACTGTTATTACATAAGA 1780
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79456251070
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5