BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G24070.1 Length=1858 Score E Sequences producing significant alignments: (Bits) Value Ahg313253 jgi|Araly1|313253|fgenesh1_pm.C_scaffold_1002033 2643 0.0 Ahg905719 jgi|Araly1|905719|Al_scaffold_0003_2847 1218 0.0 Ahg488470 jgi|Araly1|488470|fgenesh2_kg.6__1604__AT5G16190.1 1199 0.0 Ahg946577 jgi|Araly1|946577|scaffold_702806.1 898 0.0 Ahg915048 jgi|Araly1|915048|Al_scaffold_0009_17 795 0.0 > Ahg313253 jgi|Araly1|313253|fgenesh1_pm.C_scaffold_1002033 Length=1659 Score = 2643 bits (1431), Expect = 0.0 Identities = 1584/1660 (95%), Gaps = 2/1660 (0%) Strand=Plus/Plus Query 1 ATGACTACGTTTCTGAAGTCACTCATCTTCTTACAAGATTCATGTCTTGCCTTCCTCTCT 60 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct 1 ATGACTACGTTTCTGAAGTCACTCATCTCCTTACAAGATTCATGTCTTGCCTTCTTCTCT 60 Query 61 CTAATGTTCCATCGAGGGAGTTCTGAGGATGCAGCTGAAGCTCTCAAGAAGCTTGAAACA 120 ||| |||||||| ||||||||||||| |||||||||||||||| ||||||||||||| || Sbjct 61 CTACTGTTCCATGGAGGGAGTTCTGAAGATGCAGCTGAAGCTCCCAAGAAGCTTGAAGCA 120 Query 121 TCCATAAATGGTGCGAGGATAAGCTTCGACACGACATGGACACGAGAATTTAGGAGCTTA 180 ||||||||||||| |||||||||| ||||||||||||||||| ||||||| || ||||| Sbjct 121 TCCATAAATGGTGTGAGGATAAGCATCGACACGACATGGACAGGAGAATTGAGAAGCTTC 180 Query 181 TTTATAGTTCCCTTATTCAAGTGTTTGGTGGCTTTTTGTTTGATAATCTCCCTCTTAGTT 240 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 181 CTTATAGTTCCCTTATTCAAGTGTTTGGTGGCTCTTTGTTTGATGATCTCCCTCTTAGTT 240 Query 241 TTCATAGAGGGTATATACATGAACCTTGTAGTACTCTACGTCAAGGTGTTTGAGCGAAAA 300 |||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||| Sbjct 241 TTCATAGAGGGTATATACATGAACCTTGTAGTACTCTATGTCAAGTTGTTTAACCGAAAA 300 Query 301 CCCGAAAAAGTTTATAGATGGGAGGCGATGCAAGAGGACATTGAGCTTGGACATGAAACC 360 || |||||| | || | ||||||| |||||| |||||||||||||| |||||||||||| Sbjct 301 CCGGAAAAAATCTACAAATGGGAGCCGATGCCGGAGGACATTGAGCTCGGACATGAAACC 360 Query 361 TACCCCATGGTCCTTGTCCAAATTCCAATGTACAACGAAAAAGAGGTCCTTCAATTATCT 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TACCCCATGGTCCTTGTTCAAATTCCAATGTACAACGAAAAAGAGGTCCTTCAATTATCT 420 Query 421 ATAGGTGCTGCATGTAGACTAATATGGCCATTGGACCGCCTAATTGTTCAAGTTTTAGAT 480 |||||||||| |||||||||||| ||||||||||| |||||||||||||||||| ||||| Sbjct 421 ATAGGTGCTGTATGTAGACTAATCTGGCCATTGGATCGCCTAATTGTTCAAGTTCTAGAT 480 Query 481 GATTCCACTGATCAAACCATCAAGGAGCTGGTGAACACAGAGTGTGCAAAATGGGAAAGC 540 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 481 GATTCCACTGATCAAACCATGAAGGGGCTGGTGAACACAGAGTGTGCAAAATGGGAAAGC 540 Query 541 AAAGGTGTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTACAAAGCCGGAGCT 600 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 541 AAAGGCGTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTATAAAGCCGGAGCT 600 Query 601 CTTAAAGAAGGCATGAAGCACAACTACGTGAAGCTATGCAATTATGTCGTCATCTTCGAC 660 |||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct 601 CTTAAACAAGGCATGAAGCACAATTACGTGAAGCTATGCAACTATGTTGTCATCTTTGAC 660 Query 661 GCAGACTTCCAACCGGAGCCTGATTACCTCCAACACTCTGTCCCCTTCCTCGTTCATAAC 720 |||||||| ||||||||||||||||||||||||| ||||||||| |||||||| |||||| Sbjct 661 GCAGACTTTCAACCGGAGCCTGATTACCTCCAACGCTCTGTCCCATTCCTCGTCCATAAC 720 Query 721 CCCGAGGTCGCTCTGGTTCAAGCCCGATGGAGATTCATGAACGCAAACAAGTGCTTGATG 780 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 721 CCCGAGGTCGCTCTTGTTCAAGCCCGTTGGAGATTCATGAACGCAAACAAGTGCTTGATG 780 Query 781 ACGAGGATGCAAGAGATGTCCCTCAACTACCACTTTATGGCAGAGCAAGAATCTGGATCC 840 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 781 ACGAGGATGCAAGAGATGTCCCTCAACTACCACTTCATGGCAGAACAAGAATCTGGATCC 840 Query 841 ACTAGACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGCCGCGATG 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 ACTAGACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGCCGCGATG 900 Query 901 GAAGAAGCTGGAGGATGGCATGACCGGACTACTGTAGAGGACATGGACTTGGCCGTTCGT 960 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 901 GAAGAAGCTGGAGGATGGCATGACCGGACCACTGTAGAGGACATGGACTTGGCCGTTCGT 960 Query 961 GCTGGTCTTCTCGGCTGGAAATTTGTCTTTCTCAATGACCTCACGGTGAAAAGCGAGTTA 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 961 GCTGGTCTTCTCGGCTGGAAATTTGTCTTTCTCAATGACCTCACGGTGAAAAGCGAATTA 1020 Query 1021 CCAAGCAAGTTTAAGGCCTTTAGATTCCAGCAACATCGATGGTCTTGTGGTCCAGCTAAT 1080 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1021 CCAAGCAAATTTAAGGCCTTCAGATTCCAGCAACATCGATGGTCTTGTGGTCCAGCTAAT 1080 Query 1081 CTCTTCAGGAAAATGATTATGGAGATTATTCGCAATAAGAGAGTGACGATTTGGAAGAAG 1140 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 CTCTTCAGGAAAATGATTATGGAGATTATTCGCAATAAGAGAGTGACGATTTGGAAGAAG 1140 Query 1141 TTGTATCTGGTCTACAGCTTCTTTTTCTTACGGAAGATCATAGTCCACTGCTTCAC-TTT 1199 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 1141 TTGTATTTGGTCTACAGCTTCTTTTTCTTACGGAAGATCATCGTCCACTGCTTCACGTTT 1200 Query 1200 TATTTTCTACTGTGTTATTCTTCCTACAAGTGTCTTCTTTCCCGAAGTCAACATTCCAGC 1259 | || |||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1201 TCGTT-CTACTGCGTTATTCTTCCTACAAGTGTCTTCTTCCCCGAAGTCAACATTCCAGC 1259 Query 1260 TTGGTCAACTTTTTACATTCCCTCTATGATCACTCTCTGCATTGTCATTGCGACACCAAG 1319 ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 1260 TTGGTCAACTTTTTACATTCCGTCTATGATCACTCTCTGCATCGTCATTGCGACACCAAG 1319 Query 1320 ATCATTCTACCTCGTGATATTTTGGATCTTGTTTGAAAACGTAATGTCTATGCACCGGAC 1379 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320 ATCATTCTACTTCGTGATATTTTGGATCTTGTTTGAAAACGTAATGTCTATGCACCGGAC 1379 Query 1380 AAAAGGAACTTTCATCGGCATACTCGAAAGACAAAGAGTGAACGAATGGGTTGTCACTGA 1439 || ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct 1380 GAAGGGAACTTTCATCGGCATACTCGAAAAACAAAGAGTTAACGAATGGGTTGTCACTGA 1439 Query 1440 GAAATTAGGAGATGCTCTTAAGACTAAGCTACTTCCTAGGATTGGAAAACCTAGTAACAT 1499 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1440 GAAATTAGGAGATGCTCTTAAGACTAAGCTACTTCCTCGGATTGGAAAACCTAGTAACGG 1499 Query 1500 GTTTCTTGAAAGAGTAAACTCCAAGGAGATAATGGTGGGGATATACATCTTGTGTTGTGC 1559 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1500 GTTTCTTGAAAGAGTAAACTCCAAGGAGGTAATGGTGGGGATATACATCTTGTGTTGTGC 1559 Query 1560 TTGCTATGGACTTTTCTTTGGGAACACATTGTTATATCTCTATCTCTTCATGCAAGCGGT 1619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1560 TTGCTATGGACTTTTCTTTGGGAACACATTGTTATATCTCTATCTCTTCATGCAAGCGGT 1619 Query 1620 TGCTTTTCTCATATCTGGAGTTGGCTTTGTCGGCACTTAA 1659 |||||||||| |||| |||||||||||||||||||||||| Sbjct 1620 TGCTTTTCTCGTATCCGGAGTTGGCTTTGTCGGCACTTAA 1659 > Ahg905719 jgi|Araly1|905719|Al_scaffold_0003_2847 Length=969 Score = 1218 bits (659), Expect = 0.0 Identities = 854/940 (91%), Gaps = 45/940 (5%) Strand=Plus/Plus Query 108 GAAGCTTGAAACATCCATAAATGGTGCGAGGATAAGCTTCGACACGACATGGACACGAGA 167 |||||||||| ||||| | ||||||| |||||||||| ||||||| |||||||||||||| Sbjct 27 GAAGCTTGAAGCATCCGTTAATGGTGTGAGGATAAGCATCGACACAACATGGACACGAGA 86 Query 168 ATTTAGGAGCTTATTTATAGTTCCCTTATTCAAGTGTTTGGTGGCTTTTTGTTTGATAAT 227 ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 87 ATTGAGGAGCTTCCTTATAGTTCCCTTATTCAAGTGTTTGGTGGCTCTTTGTTTGATAAT 146 Query 228 CTCCCTCTTAGTTTTCATAGAGGGTATATACATGAACCTTGTAGTACTCTACGTCAAGGT 287 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 147 CTCCCTCTTAGTTTTCATAGAGGGTATATACATGAACCTTGTAGTGCTCTACGTCAAGTT 206 Query 288 GTTTGAGCGAAAACCCGAAAAAGTTTATAGATGGGAGGCGATGCAAGAGGACATTGAGCT 347 |||| ||||||||||||||||| | || | || |||| |||||| |||||||||||||| Sbjct 207 GTTTAAGCGAAAACCCGAAAAA-TCTACAAATAGGAGCCGATGCCGGAGGACATTGAGCT 265 Query 348 TGGACATGAAACCTACCCCATGGTCCTTGTCCAAATTCCAATGTACAACG-AAAA-A-G- 403 ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | | Sbjct 266 CGGACATGAAACCTACCCCATGGTCCTTGTTCAAATTCCAATGTACAACGAAAAAGAGGT 325 Query 404 --------A-G------GTCCTTCAATTATCTATAGGTGCTGCATGTAGACTAATATGGC 448 | | |||||||||||||||||||||||||||||||||||||| |||| Sbjct 326 ATATCTACATGTATTCAGTCCTTCAATTATCTATAGGTGCTGCATGTAGACTAATCTGGC 385 Query 449 CATTGGACCGCCTAATTGTTCAAGTTTTAGATGATTCCACTGATCAAACCATC------- 501 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 386 CATTGGACCGCCTAATTGTTCAAGTTCTAGATGATTCCACTGATCAAACCATCAAGAAGT 445 Query 502 A-AG----G------A---GCTGGTGAACACAGAGTGTGCAAAATGGGAAAGCAAAGGTG 547 | || | | |||||||||||||||||||||||| ||||||||| |||| | Sbjct 446 ATAGAACTGAATTTCAGGGGCTGGTGAACACAGAGTGTGCAAAGTGGGAAAGCCAAGGCG 505 Query 548 TAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTACAAAGCCGGAGCTCTTAAAG 607 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 506 TAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTATAAAGCCGGAGCTCTTAAAC 565 Query 608 AAGGCATGAAGCACAACTACGTGAAGCTATGCA-ATTATGTCGTCATCTTCGACGCAGAC 666 ||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||||||| Sbjct 566 AAGGCATGAAGCACAACTACGTGAAGCTATGCAGA-TATGTTGTCATCTTTGACGCAGAC 624 Query 667 TTCCAACCGGAGCCTGATTACCTCCAACACTCTGTCCCCTTCCTCGTTCATAACCCCGAG 726 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 625 TTTCAACCGGAGCCTGATTACCTCCAACGCTCTGTCCCCTTCCTCGTTCATAACCCCGAG 684 Query 727 GTCGCTCTGGTTCAAGCCCGATGGAGATTCATGAACGCAAACAAGTGCTTGATGACGAGG 786 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 685 GTCGCTCTTGTTCAAGCCCGATGGAGATTCATGAACTCAAACAAGTGCTTGATGACGAGG 744 Query 787 ATGCAAGAGATGTCCCTCAACTACCACTTTATGGCAGAGCA-AGAATCTGGATCCACTAG 845 ||||||||||||||||||||||||||||| ||||| || | |||||||||||||||||| Sbjct 745 ATGCAAGAGATGTCCCTCAACTACCACTTCATGGCGGA-AATAGAATCTGGATCCACTAG 803 Query 846 ACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGCCGCGATGGAAGA 905 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 804 ACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGACGCAATGGAAGA 863 Query 906 AGCTGGAGGATGGCATGACCGGACTACTGTAGAGGACATGGACTTGGCCGTTCGTGCTGG 965 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 864 AGCTGGAGGATGGCATGACCGGACCACTGTAGAGGACATGGACTTGGCCGTTCGTGCTGG 923 Query 966 TCTTCTCGGCTGGAAATTTGTCTTTCTCAATGACCTCACG 1005 |||||||||||||||||||||||||||||||||||||||| Sbjct 924 TCTTCTCGGCTGGAAATTTGTCTTTCTCAATGACCTCACG 963 > Ahg488470 jgi|Araly1|488470|fgenesh2_kg.6__1604__AT5G16190.1 Length=1332 Score = 1199 bits (649), Expect = 0.0 Identities = 1119/1346 (83%), Gaps = 32/1346 (2%) Strand=Plus/Plus Query 328 ATGCAAGAGGACATTGAGCTTGGACATGAAACCTACCCCATGGTCCTTGTCCAAATTCCA 387 |||||||||||||| ||||| ||| || ||| || |||||||| ||||||||||| ||| Sbjct 1 ATGCAAGAGGACATGGAGCTCGGAAATCAAAACTTTCCCATGGTTCTTGTCCAAATCCCA 60 Query 388 ATGTACAACGAAAAAGAGGTCCTTCAATTATCTATAGGTGCTGCATGTAGACTAATATGG 447 |||||||| ||| |||||| |||| ||||| || |||||||| || ||||| |||||| Sbjct 61 ATGTACAATGAACGAGAGGTGTTTCAGTTATCCATTGGTGCTGCTTGCAGACTCATATGG 120 Query 448 CCATTGGACCGCCTAATTGTTCAAGTTTTAGATGATTCCACTGATCAAACCATCAAGGAG 507 |||||||| || ||||| |||||||||||||||||||||||||||| ||||||| ||| Sbjct 121 CCATTGGAGCGACTAATCGTTCAAGTTTTAGATGATTCCACTGATCCCACCATCATGGAA 180 Query 508 CTGGTGAACACAGAGTGTGCAAAATGGGAAAGCAAAGGTGTAAATATAAAGTGTGAGAGG 567 ||||||||| |||||||| |||||||| || |||||| | || ||||| ||||||||| Sbjct 181 ATGGTGAACATAGAGTGTGGAAAATGGGCAACCAAAGGCATTAACATAAAATGTGAGAGG 240 Query 568 AGAGACAACAGAAATGGCTACAAAGCCGGAGCTCTTAAAGAAGGCATGAAGCACAACTAC 627 ||||| || ||||||||||| || || |||||||||||| |||| |||| ||| | ||| Sbjct 241 AGAGATAATAGAAATGGCTATAAGGCTGGAGCTCTTAAACAAGGTATGAGGCATAGTTAC 300 Query 628 GT-GAAGCTATGCAATTATGTCGTC-ATCTTCGACGCAGACTTCCAACCGGAGCCTGATT 685 || || | ||||| || | | | |||||||| || |||||||| || |||||||| | Sbjct 301 GTCAAAAC-ATGCACCTACATTG-CAATCTTCGATGCCGACTTCCAGCCAGAGCCTGACT 358 Query 686 ACCTCCAACACTCTGTCCCCTTCCTCGTTCATAACCCCGAGGTCGCTCTGGTTCAAGCCC 745 |||| |||| |||| || || || | || || ||||| ||||||| |||||||| | Sbjct 359 ACCTACAACGGACTGTTCCATTTCTTATCCACAATTCCGAGCTCGCTCTTGTTCAAGCTC 418 Query 746 GATGGAGATTCATGAACGCAAACAAGTGCTTGATGACGAGGATGCAAGAGATGTCCCTCA 805 |||||| ||| |||| || || |||||||||||||| |||||||| ||||||||||||| Sbjct 419 GATGGAAATTTGTGAATGCGAAGAAGTGCTTGATGACTAGGATGCAGGAGATGTCCCTCA 478 Query 806 ACTACCACTTT-ATGGCAGAGCAAGAATCTGGATCCACTAGACATGCCTTCTTTAGCTTC 864 | ||||| ||| | ||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 479 ATTACCA-TTTCACGGCAGAGCAAGAATCCGGATCCACTAGACATGCCTTCTTTGGCTTC 537 Query 865 AATGGAACTGCGGGTGTATGGAGAATGGCCGCGATGGAAGAAGCTGGAGGATGGCATGAC 924 ||||| ||||| |||||||||||| |||| || ||||||||||| || || ||| | ||| Sbjct 538 AATGGGACTGCTGGTGTATGGAGACTGGCGGCAATGGAAGAAGCCGGTGGTTGGAAAGAC 597 Query 925 CGGACTACTGTAGAGGACATGGACTTGGCCGTTCGTGCTGGTCTTC-TCGGCTGGAAATT 983 || || || ||||| |||||||||||||||||||||| |||||| | | ||||||||||| Sbjct 598 CGAACCACCGTAGAAGACATGGACTTGGCCGTTCGTGTTGGTCTACAT-GGCTGGAAATT 656 Query 984 TGTCTTTC-TCAATGACCTCACGGTGAAAAGCGAGTTACCAAG-CAAGTTTAAGGCCTTT 1041 |||| ||| ||||||| | |||||||||| ||| ||||||| ||| ||||||| |||| Sbjct 657 TGTC-TTCGTCAATGATGTTGCGGTGAAAAGTGAGCTACCAAGCCAA-TTTAAGG-CTTT 713 Query 1042 -AGATTCCAGCAACATCGATGGTCTTGTGGTCCAGCTAATCTCTTCAGGAAAATGATTAT 1100 || |||||||||||||||||||| || |||||||||||||||||||| ||||||| ||| Sbjct 714 CAGGTTCCAGCAACATCGATGGTCATGCGGTCCAGCTAATCTCTTCAGAAAAATGACTAT 773 Query 1101 GGAGATTATTCGCAATAAGAGAGTGACGATTTGGAAGAAGTTGTATCTGGTCTACAGCTT 1160 ||| ||||||||||||||||||||||||||||||||||| || ||| || ||||||| || Sbjct 774 GGAAATTATTCGCAATAAGAGAGTGACGATTTGGAAGAAATTTTATGTGATCTACAGTTT 833 Query 1161 CTTTTTCTTACGGAAGATCATAGTCCACTGCTTCACTTTTATT-TTCTACTGTGTT-ATT 1218 ||||||| || |||||||||||||||| | ||||||||| || ||||| ||| || ||| Sbjct 834 CTTTTTCGTAAGGAAGATCATAGTCCATTTCTTCACTTTC-TTCTTCTATTGT-TTCATT 891 Query 1219 CTTCCTACAAGTGTCTTCTTTCCCGAAGTCAACATTCC-AGCTTGGTCAACTTTTTACAT 1277 ||||||| || || ||||||||||||||||||||||| | ||||||||||| ||||| | Sbjct 892 CTTCCTATGAGCGTATTCTTTCCCGAAGTCAACATTCCGA-CTTGGTCAACTGTTTACTT 950 Query 1278 TCCCTCTATGATCACTCTCTGCATTGTCATTGCGACACCAAGATCATTCTACCTCGTGAT 1337 ||| | |||||||||||| | || || |||||||||||| |||| || ||||||||||| Sbjct 951 TCCTTTTATGATCACTCTATTCAATGCCATTGCGACACCGCGATCTTTTTACCTCGTGAT 1010 Query 1338 ATTTTGGATCTTGTTTGAAAACGTAATGTCTATGCACCGGACAAAAGGAACTTTCATCGG 1397 |||||| |||| || ||||| |||||| ||||||| ||||| ||||| ||||||||||| Sbjct 1011 TTTTTGGGTCTTATTCGAAAATGTAATGGCTATGCATCGGACCAAAGGCACTTTCATCGG 1070 Query 1398 CATACTCGAAAGACAAAGAGTGAACGAATGGGTTGTCACTGAGAAATTAGGAGATGCTCT 1457 |||| ||| || ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 1071 TTTACTTGAAGGAGGGAGAGTGAACGAATGGGTCGTCACCGAGAAATTAGGAGATGCTCT 1130 Query 1458 TAAGACTAAGCTACTTCCT-AGGATTGGAAAACCTAG-TAACATGTTTCTTGAAAG-AGT 1514 |||||||| ||||||| | | | |||||||| | || |||||| || || | | Sbjct 1131 CGAGACTAAGTTACTTCCCCAAG-TCAGAAAACCTCGCTATGG-GTTTCTCGACAGGA-T 1187 Query 1515 AAACTCCAAGGAGATAATGGTGGGGATATACATCTTGTGTTGTGCTTGCTATGGACTTT- 1573 |||||| |||||||| ||||| ||||||||||| ||||||||||| | |||| || || Sbjct 1188 AAACTCAAAGGAGATGATGGTCGGGATATACATATTGTGTTGTGCCTCCTATA-ACCTTG 1246 Query 1574 TCTTTGGGAACACATTGTTATATCTCTATCTCTT-CATGCAAGCGGTTGCTTTTCTCATA 1632 |||||||||| |||||||||||| | ||||| || |||||| || |||||||| | || Sbjct 1247 TCTTTGGGAAGACATTGTTATATATTTATCT-TTACATGCAGGCTCTTGCTTTTATTAT- 1304 Query 1633 T-CTGGAGTTGGCTTTGTCGGCACTT 1657 | | ||| |||| ||||| || |||| Sbjct 1305 TGCCGGAATTGGTTTTGTAGGAACTT 1330 > Ahg946577 jgi|Araly1|946577|scaffold_702806.1 Length=1702 Score = 898 bits (486), Expect = 0.0 Identities = 1135/1442 (79%), Gaps = 69/1442 (5%) Strand=Plus/Plus Query 196 TTCAAGTGTTTGGTGGCTT-TTTGTTTGATAATCTCCCT-CT-TAGTTTTCATAGAGGGT 252 |||||| ||||||||| || | |||||| | ||| || | |||| ||| | ||| || Sbjct 222 TTCAAGGGTTTGGTGG-TTATGTGTTTGGT--TCTATCTATTATAGTGTTCTTCGAGAGT 278 Query 253 ATATACATGAACCTTGTAG-TACTCTACGTCAAGGTGTTTGAG-CGAAAACCCGAAAAAG 310 | ||||||||| |||| | |||||| ||||||| | ||| || || |||||| | |||| Sbjct 279 TTTTACATGAACTTTGT-GATACTCTTCGTCAAGTTATTT-AGACGTAAACCCCATAAAG 336 Query 311 TTTATAGATGGGAGGCGATGCAAGAGGACATTGAGCTTGGACATGA-AACCTACCCCATG 369 | || | ||||||||| |||||||| || ||||| |||||| || || |||||| ||| Sbjct 337 TGTACAAATGGGAGGCCATGCAAGAAGATGTTGAGGTTGGACCCGATAA-CTACCCAATG 395 Query 370 GTCCTTGTCCAAATTCCAATGTACAACGAAAAAGAGGTCCTTCAATTATCTATAG-GTGC 428 || ||| ||||||| ||||||||||| |||||||||||| ||||||||||||||| | || Sbjct 396 GTTCTTATCCAAATACCAATGTACAATGAAAAAGAGGTCTTTCAATTATCTATAGCG-GC 454 Query 429 TGCATGTAGACTAATATGGCCATTGGA-CCGCCTAATTGTTCAAGTTTTAGATGATTCCA 487 |||||| | | |||||| | ||||||| | ||||||||| |||||||||| | Sbjct 455 AATATGTAGTTTGGTCTGGCCA-CCAAGCCGCCTAGTAGTTCAAGTTGTAGATGATTCTA 513 Query 488 CTGATCAAACCATCAA-GGAGCTG-GTGAACACAGAG-TGTGCAAAATGGGAAAGCAAAG 544 | |||| || | || ||| | | ||| ||| |||| | |||||||||| ||||| ||| Sbjct 514 CGGATCCGGCCGT-AAGGGA-CGGTGTGGACATAGAGAT-TGCAAAATGGCAAAGCCAAG 570 Query 545 GTGTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTACAAAGCCGGAGCTCTTA 604 | |||| |||| |||||| |||||||| || || || ||||| ||||| |||||| | | Sbjct 571 GCATAAACATAAGGTGTGAAAGGAGAGATAATAGGAACGGCTATAAAGCTGGAGCTATGA 630 Query 605 AAGAAGGC-ATGAAGCACAACTACGTGAAGCTATGCAATTAT-GTCGTCA-TCTTCGACG 661 ||||| || | | ||| | |||||| |||| |||| ||| | || | || ||||||| | Sbjct 631 AAGAA-GCTCTTACGCATAGCTACGTCAAGCAATGCGATT-TCGTAG-CAGTCTTCGATG 687 Query 662 CAGACTTCCAACCGGAGCCTGATTACCTCCA-ACACTCTGTCCCCTTCCTCGTTCATAAC 720 | || |||||||| ||||| |||||||| || | | | |||||||| || || || ||| Sbjct 688 CCGATTTCCAACCAGAGCCCGATTACCT-CATCCGCGCCGTCCCCTTTCTTGTCCACAAC 746 Query 721 CCCGAGGTCGCTCTGGTTCAAGCCCGATGGAGATTCATGAACGCAAACAAGTGCTTGATG 780 || || || ||||| |||||||||||||||| ||| | ||||| ||||| || |||||| Sbjct 747 CCTGACGTTGCTCTCGTTCAAGCCCGATGGATATTTGTTAACGCGAACAAATGTTTGATG 806 Query 781 ACGAGGATGCAAGAGATGTCCCTCAACTACCACTTT-ATGGCAGAGCAAGAATCTGGATC 839 |||||||||||||||||||| |||||||| || ||| | || || |||||||| || || Sbjct 807 ACGAGGATGCAAGAGATGTCTCTCAACTATCA-TTTCAAGGTGGAACAAGAATCAGGGTC 865 Query 840 CACTAGACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGCCGCGAT 899 ||||||||||| ||||| | || |||||||| ||||||||||||||||| | || || Sbjct 866 GACTAGACATGCTTTCTTCGGATTTAATGGAACCGCGGGTGTATGGAGAATATCGGCAAT 925 Query 900 GGAAGAAGCTGGAGGATGG-CATGACCGGACTACTGTAGAGGACATGGACTTGGCCGTTC 958 ||||| ||| ||||||||| || | |||| || |||||||||||||||||||| |||| Sbjct 926 GGAAGCAGCAGGAGGATGGAAATCA-AGGACCACAGTAGAGGACATGGACTTGGCTGTTC 984 Query 959 GTGCTGGTCTTCTCGGCTGGAAATTTGTCTTTCTCAATGACCTCACGGTGA-AAAGCGAG 1017 ||| |||||||| ||||||||||||||||| || || ||||||||||||| ||| |||| Sbjct 985 GTGTTGGTCTTCACGGCTGGAAATTTGTCTACCTTAACGACCTCACGGTGAGAAA-CGAG 1043 Query 1018 -TTACCAAGCAAGTTTAAGGCCTTTAGATTCCAGCAACATCGATGGTCTTGTGGTCCAGC 1076 || |||||||| || ||||||| ||||||||||||||| | ||||| ||||| || || Sbjct 1044 CTT-CCAAGCAAATTCAAGGCCTACAGATTCCAGCAACATAGGTGGTCCTGTGGCCCGGC 1102 Query 1077 TAATCTCTTCAGGAAAATGATTATGGAGATTATTCGCAATAAGAGAGTGA-CGATTTGGA 1135 ||||| || || ||||||| |||||||| ||||| ||||||||||| | | || |||| Sbjct 1103 GAATCTATTTAGAAAAATGACGATGGAGATCATTCGTAATAAGAGAGT-ATCAATATGGA 1161 Query 1136 AGAAGTTGTATCTGGTCTACAGCTTCTTT-TTCTTACGGAAGA-TCATAGTCCACTGCTT 1193 ||||||| ||| || |||||||||| ||| ||| || ||| | | ||| |||| ||| Sbjct 1162 AGAAGTTCTATGTGATCTACAGCTT-TTTCTTCGTA-AGAAAAGTGGCAGTACACTTCTT 1219 Query 1194 CACTTTTATT-TTCTACTGTGTTATTCTTCCTACAAGTGTCTTCTTTCCC-GAAGTCAAC 1251 || || || ||||||||| | ||| | || |||||||||||| ||||| ||| || || Sbjct 1220 GAC-ATTCTTCTTCTACTGTATAATTGTGCCAACAAGTGTCTTC-TTCCCTGAAATCTAC 1277 Query 1252 ATTCCAGCTTGGTCAACTTTTTACATTCCCTCTATGATCACTCTC-TGCATTGTCATTGC 1310 || ||| ||||||| || |||||||||||||| |||||||| || | || ||| || Sbjct 1278 ATCCCATCTTGGTCTACCATTTACATTCCCTCTTTGATCACTATCTTCCA-CACCATGGC 1336 Query 1311 GACACCAAGATCATTCTACCTCGTGATATTTTGGATCTTGTTTGAAAACGTAATGTCTAT 1370 || |||||||| ||||||||||||||||||||||||||||| || || |||||| |||| Sbjct 1337 AACTCCAAGATCCTTCTACCTCGTGATATTTTGGATCTTGTTCGAGAATGTAATGGCTAT 1396 Query 1371 GCACCGGACAAAAGGAACTTTCATCGGCATACTCGAAAGACAAAGAGTGAACGAATGGGT 1430 ||| || || |||||||| | ||| ||| |||| ||| || |||||||||||||||||| Sbjct 1397 GCATCGAACCAAAGGAACGTGCATTGGCCTACTTGAAGGAGGAAGAGTGAACGAATGGGT 1456 Query 1431 TGTCACTGAGAAATTAGGAGATGCTCTTAA-GACTAAGCTACT-TC-CTAGGATTGGAAA 1487 ||| || || ||||||||||||||| |||| || ||||||||| || | ||| | | | Sbjct 1457 TGTGACCGAAAAATTAGGAGATGCT-TTAAAGAATAAGCTACTCTCGC-AGG-TCGTCCA 1513 Query 1488 ACCTAGTAACATGTT-TCT-TGAAAGAGTAAACTCCAAGGA-GATAATGGTGGGGATATA 1544 | || || || || | | ||| ||||| || || ||||| | | ||||||||| | || Sbjct 1514 A---AGGAA-ATCTTGT-TATGAGAGAGTGAATTCAAAGGAAG-TGATGGTGGGGGTGTA 1567 Query 1545 CATCTT-GTGTTGTGCT-TGCTATGGACTTTTCTTTGGGAACACATTGTTATATCTCTAT 1602 ||| || | | ||||| | |||||| || ||| ||| |||||| |||| || ||||| Sbjct 1568 CATATTAG-GATGTGCACT-CTATGGCCTGATCTATGGCCACACATGGTTACATTTCTAT 1625 Query 1603 CT 1604 || Sbjct 1626 CT 1627 > Ahg915048 jgi|Araly1|915048|Al_scaffold_0009_17 Length=1569 Score = 795 bits (430), Expect = 0.0 Identities = 750/903 (83%), Gaps = 27/903 (3%) Strand=Plus/Plus Query 112 CTTGAAA-CATCCATAAATGGTGCGAGGATAAGCTTCGACACGACATGGACACGAGAATT 170 ||| ||| ||||| | || ||| | |||||||| | ||||| | ||| | ||||| Sbjct 82 CTT-AAAGCATCCGTGGATAGTGTGGGGATAAGCATGGACACTATGTGG--A-GAGAAAC 137 Query 171 TAGGAGCT-TATTTATAGTTCCCTTATTCAAGTGTTTGGTGGCTTTTTGTTTGATAATCT 229 ||||| | || | |||||||| | ||||||||| |||||||| | |||||| | || | Sbjct 138 AAGGAG-TGTACTCATAGTTCCAGTGTTCAAGTGTGTGGTGGCTATGTGTTTGGTCATAT 196 Query 230 CCCTCTTAG-TTTTCATAGAGGGTATATACATGAACCTTGTAGTACTCTACGTCAAGGTG 288 | | || | ||||||| ||| || | |||||||||||||||||||||||||||||| || Sbjct 197 CATTATT-GATTTTCATGGAGAGTGTTTACATGAACCTTGTAGTACTCTACGTCAAGTTG 255 Query 289 TTTGAGCGAAAACCCGAAAAAGTTTATAGATGGGAGGCGATGCAAGAGGACATTGAGCTT 348 ||| | |||||||| || || || |||| ||||||||| ||||| || || || |||||| Sbjct 256 TTTAACCGAAAACCTGAGAAGGTCTATAAATGGGAGGCAATGCAGGAAGATATGGAGCTT 315 Query 349 GGACATGAAACCTACCCCATGGTCCTTGTCCAAATTCCAATGTACAACGAAAAAGAGGTC 408 || ||| ||| ||| || ||||||||||||||||||||||||||||||||| ||||||| Sbjct 316 GGTCATCAAAACTATCCGATGGTCCTTGTCCAAATTCCAATGTACAACGAACGAGAGGTC 375 Query 409 CTTC-AATTATCTATAGGTGCTGCATGTAGACTAATATGGCCATTGGACCGCCTAATTGT 467 ||| ||||||||||||||||||| || ||||||| ||||||| |||||||||||| || Sbjct 376 -TTCGAATTATCTATAGGTGCTGCGTGCAGACTAACGTGGCCATCGGACCGCCTAATCGT 434 Query 468 TCAAGTTTTAGATGATTCCACTGATCAAACCATCAAGGAGCTGGTGAACACAGAGTGTGC 527 |||||||||||||||||| || |||| | |||||| ||| ||||||| || || ||||| Sbjct 435 TCAAGTTTTAGATGATTCTACCGATCCAGCCATCATGGAACTGGTGAGCATGGAATGTGC 494 Query 528 AAAATGGGAAAGCAAA-GGTGTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCT 586 |||||||| | |||| || |||| ||||||| ||||||| |||||||||||||||||| Sbjct 495 AAAATGGGCAT-CAAAAGGCATAAACATAAAGTATGAGAGGCGAGACAACAGAAATGGCT 553 Query 587 ACAAAGCCGGAGCTCTTAAAGAA-GGCATGAAGCACAACTACGTGAAGCTA-TGCAATTA 644 |||| || ||||||||||| | | ||||||| ||||| |||||| |||| | ||||| || Sbjct 554 ACAAGGCTGGAGCTCTTAA-GCACGGCATGAGGCACAGCTACGTCAAGC-ACTGCAACTA 611 Query 645 TGTCGTCATCTTCGACGCAGACTTCCAA-CCGGAGCCTGATTACCTCCAACACTCTGTCC 703 | | | |||||| || || || ||||| ||| || | || |||||||||| | || ||| Sbjct 612 TTTGGCCATCTTTGATGCTGATTTCCAGTCCG-AGTCAGACTACCTCCAACGCGCTATCC 670 Query 704 CCTTCCTCGTTCATAACCCCGAGGTCGCTCTGGTTCAAGCCCGATGGAGATTCATGAACG 763 |||| || | || ||||| ||||||||||| |||||||| ||||||||||| |||||| Sbjct 671 CCTTTCTTATCCACAACCCTGAGGTCGCTCTAGTTCAAGCTCGATGGAGATTTGTGAACG 730 Query 764 CAAACA-AGTGCTTGATGACGAGGATGCAAGAGATGTCCCTCAACTACCACTTT-ATGGC 821 | |||| | ||||| ||||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct 731 CGAACACA-TGCTTAATGACGAGGATCCAAGAGATGTCTCTCAACTACCA-TTTCATGGC 788 Query 822 AGAGCAAGAATCTGGATCCACTA-GACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTG 880 ||||||| ||||||||||||| | |||||| |||||| |||| |||||||||||||| | Sbjct 789 AGAGCAACAATCTGGATCCAC-ACGACATGATTTCTTTGGCTTTAATGGAACTGCGGGAG 847 Query 881 TATGGAGAATGGCCGCGATGGAAGAAGCTGGAGGATGGCATGACCGGACTACTGTAGAGG 940 | ||||||||||| |||||||||||||||||||||||| | |||||||| || || |||| Sbjct 848 TGTGGAGAATGGCGGCGATGGAAGAAGCTGGAGGATGGAAGGACCGGACGACGGTGGAGG 907 Query 941 ACATGGACTTGGCCGTTCGTGCTGGTCTTCTCGGCTGGAAATTTGTCTTTC-TCAATGAC 999 ||||||||||||||||||||| |||||||||||| ||||||||| |||| | |||||||| Sbjct 908 ACATGGACTTGGCCGTTCGTGTTGGTCTTCTCGGTTGGAAATTTATCTT-CGTCAATGAC 966 Query 1000 CTC 1002 ||| Sbjct 967 CTC 969 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69781328840 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5