BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G31420.1
Length=2469
Score E
Sequences producing significant alignments: (Bits) Value
Ahg922635 jgi|Araly1|922635|scaffold_103916.1 3022 0.0
Ahg934183 jgi|Araly1|934183|scaffold_402171.1 1749 0.0
Ahg476351 jgi|Araly1|476351|fgenesh2_kg.2__1481__AT1G72180.1 93.5 7e-18
> Ahg922635 jgi|Araly1|922635|scaffold_103916.1
Length=1819
Score = 3022 bits (1636), Expect = 0.0
Identities = 1760/1821 (97%), Gaps = 4/1821 (0%)
Strand=Plus/Plus
Query 308 TATTATGCTTGGACAGTGCCATGATGGGCATCTGTGAGATGAAAAGCTGCTGCTCATGGC 367
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TATTATGCTTGCACAGTGCCATGATGGGCATCTGTGAGATGAAAAGCTGCTGCTCATGGC 60
Query 368 TTCTTTTGATCTCGTTGCTTTGCT-CACTATCTAATGAAAGTCAAGCGATTAGTCCTGAC 426
||||||||||||| ||||||| | ||||||| ||||||| |||||| ||||||||||||
Sbjct 61 TTCTTTTGATCTCATTGCTTT-TTGCACTATCAAATGAAACTCAAGCAATTAGTCCTGAC 119
Query 427 GGCGAGGCGCTTCTGAGCTTCAGAAATGCAGTTACTAGATCAGATAGTTTCATCCATCAG 486
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 120 GGCGAGGCGCTTCTGAGCTTCAGAAATGCAGTTTCTAGATCAGATAGTTTCATCCATCAG 179
Query 487 TGGAGACCGGAAGATCCAGATCCATGTAACTGGAACGGAGTGACATGTGATGCAAAAACG 546
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 180 TGGAGACCGGAAGATCCAGATCCATGTAACTGGAATGGAGTGACATGTGATGCGAAAACG 239
Query 547 AAAAGAGTTATAACCTTGAATCTTACTTATCACAAAATAATGGGACCTTTACCTCCTGAT 606
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 AAAAGAGTTATAACCTTGAATCTTACTTATCACAAAATAATGGGACCTTTACCTCCTGAG 299
Query 607 ATTGGAAAGTTGGACCATTTAAGGCTTTTAATGCTTCACAACAATGCTTTATATGGAGCA 666
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 ATTGGAAAGCTGGACCATTTAAGGCTTTTAATGCTTCACAACAATGCTTTATATGGAGCA 359
Query 667 ATACCTACAGCATTGGGAAATTGCACAGCATTGGAGGAAATTCACTTGCAGAGTAACTAC 726
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 360 ATACCTACAGCATTGGGAAATTGCACGGCATTAGAGGAAATTCACTTGCAGAGTAACTAC 419
Query 727 TTCACTGGACCAATCCCAGCTGAAATGGGAGACCTGCCTGGCCTTCAAAAGCTGGACATG 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TTCACTGGACCAATCCCAGCTGAAATGGGAGACCTGCCTGGCCTTCAAAAGCTGGACATG 479
Query 787 TCAAGCAACACTCTCAGTGGACCTATCCCTGCTTCGCTTGGGCAGTTAAAAAAGCTTA-G 845
|||||||||||||| |||||| ||||||||||||| ||||||||||| |||||||||| |
Sbjct 480 TCAAGCAACACTCTTAGTGGAGCTATCCCTGCTTCACTTGGGCAGTTGAAAAAGCTTACG 539
Query 846 TAACTTCAATGTCTCGAACAACTTCCTGGTGGGGCAAATACCTTCAGACGGAGTGCTCTC 905
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 -AACTTCAATGTCTCAAACAACTTCCTGGTGGGGCAAATACCTTCAGACGGAGTGCTCTT 598
Query 906 TGGATTTTCTAAGAACTCCTTCATTGGAAATCTTAACTTGTGTGGAAAGCATGTTGATGT 965
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 599 TGGATTTTCTAAGAACTCCTTCATTGGAAATCTTAACTTGTGTGGAAAGCATATTGATGT 658
Query 966 CGTGTGCCAAGATGATAGTGGAAACCCTTCATCACATTCTCAATCAGGTCAAAATCAAAA 1025
|||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||
Sbjct 659 CGTGTGCCAAGATGATAGTGGAAACCCTTCTTCAAAGTCTCAATCAGGTCAAAATCAAAA 718
Query 1026 GAAAAACTCTGGTAAGCTGCTGATTAGCGCATCAGCAACTGTAGGTGCGCTACTCCTAGT 1085
|||||| |||||||||||||| |||||||||||||||||| ||||||| || ||||||||
Sbjct 719 GAAAAATTCTGGTAAGCTGCTTATTAGCGCATCAGCAACTATAGGTGCACTGCTCCTAGT 778
Query 1086 TGCACTCATGTGTTTCTGGGGATGCTTTCTATATAAAAAGCTCGGTAAAGTCGAGATTAA 1145
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 GGCACTCATGTGTTTCTGGGGATGCTTTCTATATAAAAAGCTCGGTAAAGTCGAGATTAA 838
Query 1146 AAGCCTTGCAAAGGATGTTGGTGGAGGTGCGTCTATTGTGATGTTCCACGGAGATTTACC 1205
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 839 AAGCCTTGCAAAGGATGTTGGGGGAGGTGCGTCTATTGTGATGTTCCACGGAGATTTGCC 898
Query 1206 TTACTCTTCCAAAGATATCATTAAGAAGCTGGAAATGTTGAATGAAGAGCACATAATTGG 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 899 TTACTCTTCCAAAGATATCATTAAGAAGCTGGAAATGTTGAATGAAGAGCACATAATCGG 958
Query 1266 ATGTGGAGGCTTTGGAACGGTGTATAAGCTGGCCATGGATGATGGCAAAGTCTTTGCATT 1325
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 959 ATGTGGAGGCTTTGGAACGGTGTATAAGCTGGCCATGGATGATGGCAAGGTCTTTGCATT 1018
Query 1326 GAAGAGAATTCTAAAGTTAAACGAAGGGTTTGATCGGTTTTTTGAGCGGGAGCTTGAGAT 1385
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 1019 AAAGAGAATTCTAAAGTTAAACGAAGGGTTTGATCGTTTTTTTGAGAGGGAGCTTGAGAT 1078
Query 1386 TCTTGGGAGCATCAAACACCGATACCTCGTGAATCTACGTGGATATTGCAATTCACCAAC 1445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 TCTTGGGAGCATCAAACACCGATACCTCGTGAATCTACGTGGATATTGCAATTCACCAAC 1138
Query 1446 ATCAAAGCTACTGTTATATGATTACTTGCCCGGTGGTAGCCTTGATGAAGCACTTCATGT 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 ATCAAAGCTACTGTTATATGATTACTTGCCCGGTGGTAGCCTTGATGAAGCACTTCATGT 1198
Query 1506 AGAGAGAGGCGAGCAATTGGACTGGGATTCACGCGTAAATATCATCATAGGAGCTGCGAA 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 AGAGAGAGGCGAGCAATTGGACTGGGATTCACGCGTAAATATCATCATAGGAGCTGCGAA 1258
Query 1566 AGGGTTATCATATTTGCATCATGATTGTTCTCCTCGGATTATACATCGTGATATAAAGTC 1625
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 1259 AGGGTTATCATATTTGCATCATGATTGTTCTCCTAGGATTATACACCGTGATATAAAGTC 1318
Query 1626 GAGCAACATTTTGCTTGATGGCAATCTCGAGGCACGGGTATCGGATTTTGGTCTAGCCAA 1685
||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1319 GAGCAACATATTGCTTGATGGCAATCTGGAGGCGCGGGTATCGGATTTTGGTCTAGCCAA 1378
Query 1686 GTTGTTGGAAGACGAAGAATCTCATATCACAACCATTGTTGCAGGCACATTTGGGTACCT 1745
||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |
Sbjct 1379 GTTGTTGGAAGACGAAGAATCGCATATTACAACCATTGTTGCAGGCACATTTGGGTACTT 1438
Query 1746 AGCTCCAGAATATATGCAAAGTGGTAGAGCAACTGAGAAAACCGATGTATACAGTTTTGG 1805
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1439 AGCGCCAGAATATATGCAAAGTGGTAGAGCAACTGAGAAAACCGATGTATACAGTTTTGG 1498
Query 1806 GGTTTTGGTTCTTGAAGTCTTGAGTGGGAAAAGACCAACCGATGCTTCCTTCATCGAGAA 1865
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1499 GGTTTTGGTTCTTGAAGTCTTGAGTGGGAAACGACCAACCGATGCTTCCTTCATCGAGAA 1558
Query 1866 AGGCCTTAACGTTGTTGGTTGGCTAAAGTTCTTAATCAGCGAAAAACGGCCAAGGGATAT 1925
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1559 AGGCCTTAACGTTGTTGGTTGGCTAAAGTTGTTAATCAGCGAAAAACGGCCAAGGGAGAT 1618
Query 1926 TGTTGATCCAAACTGTGAAGGAATGCAGATGGAGAGCCTTGACGCTCTACTATCAATAGC 1985
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1619 TGTTGATCGAAACTGTGAAGGAATGCAGATAGAGAGCCTTGACGCTCTACTATCAATAGC 1678
Query 1986 AACACAGTGTGTGTCTCCGAGTCCAGAAGAGCGTCCAACGATGCATCGGGTTGTCCAGTT 2045
||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1679 AACACAGTGCGTGTCTTCGAGTCCAGAAGATCGTCCCACGATGCATCGGGTTGTCCAGTT 1738
Query 2046 ACTTGAATCAGAGGTCATGACTCCTTGTCCCAGCGAATTTTATGATTCCAGCTCTGATTA 2105
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1739 GCTTGAATCAGAGGTCATGACTCCTTGTCCCAGTGAATTTTATGATTCCAGCTCTGACTA 1798
Query 2106 ATTGCATAAACCCACCAGTCG 2126
|||||||||||||||||||||
Sbjct 1799 ATTGCATAAACCCACCAGTCG 1819
> Ahg934183 jgi|Araly1|934183|scaffold_402171.1
Length=1816
Score = 1749 bits (947), Expect = 0.0
Identities = 1538/1821 (84%), Gaps = 50/1821 (3%)
Strand=Plus/Plus
Query 311 TATGCTTGGACAGTGCCATGATGGGCATCTGTGAGATGAAAAGCTGCTGCTCATGGCTTC 370
|||||||| || ||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct 1 TATGCTTGAACGGTGCCATAATGGGCATCTGTCTGATGAACCGCTGCTGCTCATGGCTTC 60
Query 371 TTTTGATCTCGTTGCTTTGCT-CACTATCTAATGAAAGTCAAGCGATTAGTCCTGACGGC 429
|||||||||| ||||||| || ||||| | ||||||| | |||| |||||||| || ||
Sbjct 61 TTTTGATCTCATTGCTTT-CTGCACTACCGAATGAAATTGAAGCAATTAGTCCCGATGGT 119
Query 430 GAGGCGCTTCTGAGCTTCAGAAATGCAGTTACTAG-ATCAGATAGTTTCATCCATCAGTG 488
||||||||| |||| || ||||||| |||| | | || ||| || |||| ||||||
Sbjct 120 GAGGCGCTTTTGAGTTTTAGAAATGGAGTT-TTGGCTTCTGATGGTGTCATTGGTCAGTG 178
Query 489 GAGACCGGAAGATCCAGATCCATGTAACTGGAACGGAGTGACATGTGATGCAAAAACGAA 548
|||||| || ||||| ||||||||||||||||| |||||||| |||||||| ||||| ||
Sbjct 179 GAGACCAGAGGATCCTGATCCATGTAACTGGAAGGGAGTGACCTGTGATGCCAAAACAAA 238
Query 549 AAGAGTTATAACCTTGAATCTTACTTATCACAAAATAATGGGACCTTTACCTCCTGATAT 608
|||||||||| |||||| |||||| ||||||||| ||| |||||||||||| ||||| |
Sbjct 239 AAGAGTTATAGCCTTGAGTCTTACATATCACAAATTAAGGGGACCTTTACCCCCTGAGCT 298
Query 609 TGGAAAGTTGGACCATTTAAGGCTTTTAATGCTTCACAACAATGCTTTATATGGAGCAAT 668
||||||| |||| || ||||||||||||||||||||||||||||| |||||| | ||||
Sbjct 299 TGGAAAGCTGGATCAGTTAAGGCTTTTAATGCTTCACAACAATGCGTTATATCAACCAAT 358
Query 669 ACCTACAGCATTGGGAAATTGCACAGCATTGGAGGAAAT-TCACTTGCAGAGTAACTACT 727
|||| | |||||||||||||||| ||||| |||| ||| | ||||||||| ||| |||
Sbjct 359 ACCTGCCTCATTGGGAAATTGCACGGCATTAGAGGGAATAT-ACTTGCAGAATAATTACA 417
Query 728 TCACTGGACCAATCCC-AGCTGAAATGGGAGACCTG-CCTGGCCTTCAAAAGCTGGACAT 785
||| ||| ||||||| || |||||| ||| ||||| || || || |||| ||||||||
Sbjct 418 TCAGTGGGGCAATCCCAAG-TGAAATAGGAAACCTGTCC-GGGCTGAAAAACCTGGACAT 475
Query 786 GTCAAGCAACACTCT-CAGTGGACCTATCCCTGCTTCGCTTGGGCAGTTAAAAAAGCTTA 844
|||| ||||| ||| ||| ||| ||||||||||||| ||||||||||| ||||||||||
Sbjct 476 CTCAAACAACAATCTCCAG-GGAGCTATCCCTGCTTCACTTGGGCAGTTGAAAAAGCTTA 534
Query 845 GTAACTTCAATGTCTCGAACAACTTCCTGGTGGGGCAAATACCTTCAGACGGAGTGCTCT 904
||| ||||||||||| ||||| ||||||| ||| ||||||||||| ||||| | |||
Sbjct 535 CTAAATTCAATGTCTCAAACAATTTCCTGGAGGGACAAATACCTTCTGACGGCCTACTCG 594
Query 905 CTGGATTTTCTAAGAACTCCTTCATTGGAAATCTTAACTTGTGTGGAAAGCATGTTGATG 964
|| || |||| | | ||||||||| || |||||||| ||||||||||| || | ||||
Sbjct 595 CTCGACTTTCGAGGGACTCCTTCAACGGGAATCTTAATTTGTGTGGAAAACAAATCGATG 654
Query 965 TCGTGTGCCAAGATGATAGTGGAAACCCTTCA---TCACATTCT-CAATCAGGTCAAAAT 1020
| ||||| | | |||| |||||||| || || || ||| ||| |||| | ||
Sbjct 655 TTGTGTG-C-A-ATGACAGTGGAAATTCTACAGCTTCTGGGTCTCCAA-CAGG-C-CAA- 707
Query 1021 CAAAAG-AAAAACTCTGGTAA-GCTGCTGATTAGCGCATCAGCAACTGTAGGTGCGCTAC 1078
| | || ||| || || |||||| || || || ||||||||||| |||| ||| |
Sbjct 708 -GGAGGTAATAACCCT-AAAAGGCTGCTTATAAGTGCTTCAGCAACTGTGGGTGGGCTGC 765
Query 1079 TCCTAGTTGCACTCATGTGTTTCTGGGGATGCTTTCTATATAAAAAGCTCGGTAAAGTCG 1138
||||||| || |||||||||||||||||||||||||| ||||||||||| |||| ||| |
Sbjct 766 TCCTAGTGGCGCTCATGTGTTTCTGGGGATGCTTTCTCTATAAAAAGCTTGGTAGAGTTG 825
Query 1139 AGATTAAAAGCC-T-TGCAAAGGATGTTGGTGGAGGTGCGTCTATTGTGATGTTCCACGG 1196
||| |||||||| | || | | ||||| ||||||||||||||||| ||||||||||| ||
Sbjct 826 AGAGTAAAAGCCATGTG-ATA-GATGTCGGTGGAGGTGCGTCTATAGTGATGTTCCATGG 883
Query 1197 AGATTTACCTTACTCTTCCAAAGATATCATTAAGAAGCTGGAAATGT-TGAATGAAGAGC 1255
|||||| || ||| ||||||||||||| || ||||| |||| ||| | | ||||||||||
Sbjct 884 AGATTTGCCCTACGCTTCCAAAGATATTATCAAGAAACTGG-AATCTCTTAATGAAGAGC 942
Query 1256 ACATAATTGGATGTGGAGGCTTTGGAACGGTGTATAAGCTGGCCATGGATGATGGCAAAG 1315
||||||| || ||||||||||||||||| ||||| ||| || | |||||||||||||| |
Sbjct 943 ACATAATAGGCTGTGGAGGCTTTGGAACAGTGTACAAGTTGTCGATGGATGATGGCAATG 1002
Query 1316 TCTTTGCATTGAAGAGAATTCTAAAGTTAAACGAAGGGTTTGATCGGTTTTTTGAGCGGG 1375
| |||||| |||| |||||| |||||||||| ||||| ||||||||||||||||| |||
Sbjct 1003 TTTTTGCACTGAAAAGAATTGTAAAGTTAAATGAAGGTTTTGATCGGTTTTTTGAAAGGG 1062
Query 1376 AGCTTGAGATTCTTGGGAGCATCAAACACCGATACCTCGTGAATCTACGTGGATATTGCA 1435
|||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||
Sbjct 1063 AGCTTGAGATTCTTGGGAGCATCAAACATCGTTACCTTGTGAATCTACGTGGATACTGCA 1122
Query 1436 ATTCACCAACATCAAAGCTACTGTTATATGATTAC-TTGCCCGGTGGTAGCCTTGATGAA 1494
||||||| ||||||||||| ||| ||||||||||| || || ||||||||||||||||||
Sbjct 1123 ATTCACCCACATCAAAGCTTCTGCTATATGATTACCTT-CCTGGTGGTAGCCTTGATGAA 1181
Query 1495 GCACTTCATGTAGAGAGAGGCGAGCAATTGGACTGGGATTCACGCGTAAATATCATCATA 1554
|| || ||| | ||||||||||||| |||| |||||||| |||||||||||||| |||
Sbjct 1182 GCTCTACAT--A-AGAGAGGCGAGCAGCTGGATTGGGATTCGCGCGTAAATATCATAATA 1238
Query 1555 GGAGCTGCGAAAGGGTTATCATATTTGCATCATGATTGTTCTCCTCGGATTATACATCGT 1614
||||| || ||||| ||| |||| ||||||||||||||||||||| |||||||||| |||
Sbjct 1239 GGAGCGGCAAAAGGTTTAGCATACTTGCATCATGATTGTTCTCCTAGGATTATACACCGT 1298
Query 1615 GATATAAAGTCGAGCAACATTTTGCTTGATGGCAATCTCGAGGCACGGGTATCGGATTTT 1674
|||||||| || ||||||||||| || ||||| ||||||||||| |||||||| || |||
Sbjct 1299 GATATAAAATCAAGCAACATTTTACTGGATGGAAATCTCGAGGCTCGGGTATCAGACTTT 1358
Query 1675 GGTCTAGCCAAGTTGTTGGAAGACGAAGAATCTCATATCACAACCATTGTTGCAGGCACA 1734
||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct 1359 GGTCTTGCCAAGTTGTTAGAGGACGAAGAATCTCATATTACAACCATTGTTGCAGGCACA 1418
Query 1735 TTTGGGTACCTAGCTCCAGAATATATGCAAAGTGGTAGAGCAACTGAGAAAACCGATGTA 1794
|| || ||| | |||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1419 TTCGGTTACTTGGCTCCAGAGTATATGCAAAGTGGTAGAGCGACTGAGAAAACCGATGTT 1478
Query 1795 TACAGTTTTGGGGTTTTGGTTCTTGAAGTCTTGAGTGGGAAAAGACCAACCGATGCTTCC 1854
|||||||| ||||||||||||||||||||||||||||| ||| || || ||||| |||
Sbjct 1479 TACAGTTTCGGGGTTTTGGTTCTTGAAGTCTTGAGTGGTAAACTTCCCACGGATGCCTCC 1538
Query 1855 TTCATCGAGAAAGGCCTTAACGTTGTTGGTTGGCTAAAGTTCTTAATCAGCGAAAAACG- 1913
||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||
Sbjct 1539 TTCATCGAGAAAGGCTTTAACATTGTTGGTTGGCTAAACTTCTTAATCAGCGAAAACCGT 1598
Query 1914 GCCAAGGGATATTGTTGATCCAAA-CTGTGAAGGAATGCAGATG-GAGAGCCTTGACGCT 1971
|| |||| | |||||||||| ||| |||||||||| || ||| | ||||| ||||| |||
Sbjct 1599 GCAAAGG-AGATTGTTGATC-AAAGCTGTGAAGGAGTGGAGA-GAGAGAGTCTTGATGCT 1655
Query 1972 CTACTATCAATAGCAAC-ACAGTGTGTGTC-TCCGAGTCCAGAAGAGCGTCCAACGATGC 2029
|| |||||||||||||| | |||||||||| || |||||||| ||||| ||||| ||||
Sbjct 1656 CTTCTATCAATAGCAACGA-AGTGTGTGTCGTCA-AGTCCAGATGAGCGGCCAACAATGC 1713
Query 2030 ATCGG-GTTGTCCAGTTACTTGAATCAGAGGTCATGACTCCTTGTCCCAGCGAATTTTAT 2088
| | | || ||||||||||||||||| || || ||||||||||| |||||||| || ||
Sbjct 1714 A-CAGAGTCGTCCAGTTACTTGAATCCGAAGTTATGACTCCTTGCCCCAGCGACTTCTAC 1772
Query 2089 GATTCCAGCTCTGATTAATTG 2109
||||||||||| |||| ||||
Sbjct 1773 GATTCCAGCTCCGATTGATTG 1793
> Ahg476351 jgi|Araly1|476351|fgenesh2_kg.2__1481__AT1G72180.1
Length=3539
Score = 93.5 bits (50), Expect = 7e-18
Identities = 79/93 (85%), Gaps = 2/93 (2%)
Strand=Plus/Plus
Query 1555 GGAGCTGCGAAAGGGTTATCATATTTGCATCATGATTGTTCTCCTCGGATTATACATC-G 1613
||||| || ||||| | ||||||||||||||||||||| ||||| || || || | |
Sbjct 2800 GGAGCGGCTAAAGGAATCGCATATTTGCATCATGATTGTTGTCCTCCAATCATTCA-CAG 2858
Query 1614 TGATATAAAGTCGAGCAACATTTTGCTTGATGG 1646
||||||||||||||||||||||||||||||||
Sbjct 2859 AGATATAAAGTCGAGCAACATTTTGCTTGATGG 2891
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93054468535
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5