BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G32230.1 Length=2582 Score E Sequences producing significant alignments: (Bits) Value Ahg473413 jgi|Araly1|473413|fgenesh2_kg.1__3367__AT1G32230.1 3629 0.0 Ahg907240 jgi|Araly1|907240|Al_scaffold_0002_321 473 2e-132 Ahg915414 jgi|Araly1|915414|Al_scaffold_0008_165 381 1e-104 Ahg344261 jgi|Araly1|344261|fgenesh1_pg.C_scaffold_4000603 333 4e-90 > Ahg473413 jgi|Araly1|473413|fgenesh2_kg.1__3367__AT1G32230.1 Length=2534 Score = 3629 bits (1965), Expect = 0.0 Identities = 2271/2413 (94%), Gaps = 43/2413 (2%) Strand=Plus/Plus Query 190 TTTTCTGGTCAGCTTTTGCTTTT----AG---ATTACCCTTGTTGCCT--GCGATCGATC 240 ||||||||| ||||||||||||| || |||||||||||||||| |||||||||| Sbjct 144 TTTTCTGGTTAGCTTTTGCTTTTACAGAGATTATTACCCTTGTTGCCTCAGCGATCGATC 203 Query 241 TGAAAAAAGAGGAACTTTATCTTGCTGACGGCTGTTATA-AAAAGAC-GTGGCATTTCTT 298 |||||||| |||||| ||||||| ||||||||||||| ||||||| |||||||||||| Sbjct 204 TGAAAAAAAAGGAACGCCATCTTGCCGACGGCTGTTATATAAAAGACGGTGGCATTTCTT 263 Query 299 CTCTGATTGTGTTTATTTTTATGACGGAGAAGATGAACACACTTGTAATCTATCAGACTC 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 264 CTCTGATTGTGTTTATTTTTATGACGGAGAAGATGAACACACTTGTAATCTATCAGCCTC 323 Query 359 TAACTGTTACTGTTGGTGTTTTCTAATGCTGTCGGCAAGACACTATCTTTAGGACTGCTA 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 324 TAACTGTTACTGTTGGTGTTTTCTAATGCTGTCGGCAAGACACTATCTTTAGGAGTGCTA 383 Query 419 GGGAGTTTAGAGGTTACACAGTTGACTTTTTCTATCAAGGTTATAGGTTTAGTATTGTTA 478 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct 384 GGGAGTTTAGAGGTTACTCAGTTGACTTTTTCTTTCAAGGTTATAGGTTTAGTATTGTTA 443 Query 479 ATATATAGAAATGGAAGCCAAGATCGTCAAGGTGTTGGATAGTAGTAGGTGTGAAGATGG 538 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 444 ATATATAGAAATGGAAGCCAAGATCGTCAAGGTGTTGG---GTAGTAGGTGTGAAGATGG 500 Query 539 ATTCGGAAAAAAGAGGAAGCGCGCAGCAAGCTATGCTGCATATGTTACTGGAGTTTCGTG 598 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 501 ATTCGGGAAGAAGAGGAAGCGCGCAGCAAGCTATGCTGCATATGTTACTGGAGTTTCGTG 560 Query 599 TGCAAAGCTGCAAAATGTGCCCCCACCGAACGGGCAGTGCCAAATTCCTGACAAAAGAAG 658 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 561 TGCAAAGCTGCAAAATGTGCCCCCACCGAACGGGCTGTGCCAAATTCCTGACAAAAGAAG 620 Query 659 AAGGCTGGAAGGTGAAAACAAGCTTAGCGCTTACGAGAATCGCTCTGGGAAGGCGCTGGT 718 |||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct 621 AAGGCTGGAAGGTGAAAATAAGCTTAGCGCTTATGAGAATCGCTCTGGGAAGGCACTGGT 680 Query 719 CAGATATTACACTTATTTTAAGAAGACTGGAATCGCTAAACGTGTTATGATGTATGAGAA 778 |||||| |||||||||||||||||||| ||||||||||||||||||||||| || || || Sbjct 681 CAGATACTACACTTATTTTAAGAAGACGGGAATCGCTAAACGTGTTATGATCTACGAAAA 740 Query 779 TGGCGAATGGAATGATTTGCCTGAGCACGTTATATGCGCCATCCAGAATGAATTAGAAGA 838 ||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| || Sbjct 741 TGGTGAATGGAATGATTTGCCTGAGCATATTATATGCGCCATCCGGAATGAATTAGATGA 800 Query 839 AAAGAGCGCCGCAATTGAGTTCAAGTTATGCGGTCACAGTTTTATTTTGGACTTCTTGCA 898 |||||| ||||||||||||||| |||| |||||||||| |||||| |||||||||||||| Sbjct 801 AAAGAGAGCCGCAATTGAGTTCGAGTTGTGCGGTCACAATTTTATCTTGGACTTCTTGCA 860 Query 899 CATGCAAAGACTAGACATGGAAACAGGAGCAAAAACCCCTCTTGCATGGATTGACAATGC 958 |||||| ||||||||| ||| |||||| ||||||||||| || ||||||||||||| || Sbjct 861 CATGCATAGACTAGACTTGGGAACAGGGGCAAAAACCCCACTAGCATGGATTGACATTGG 920 Query 959 AGGAAAGTGCTTTTTCCCTGAAATTTATGAGAGTGATGAAAGGACCAATTACTGCCATCA 1018 ||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 921 AGGCAAGTGTTTTTTCCCTGAAATTTACGAGAGTGATGAAAGGACCAATTGCTGCCATCA 980 Query 1019 TAAATGTGTGGAAGACCCAAAACAGAATGCTCCTCATGATATCAAACTTCGCCTAGAGAT 1078 ||| | ||||||||| ||||||||||||||||| |||||||||||||| ||||| ||||| Sbjct 981 TAACTTTGTGGAAGATCCAAAACAGAATGCTCCCCATGATATCAAACTGCGCCTTGAGAT 1040 Query 1079 TGATGTTAATGGTGGCGAGACACCGAGGTTAAATTTGGAGGAGTGCAGTGATGAGTCTGG 1138 ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1041 TGACGTTAATGGTGGCGAGTCACCGAGGTTAAATTTGGAGGAGTGCAGTGATGAGTCTGG 1100 Query 1139 TGATAATATGATGGACGATGTTCCCCTTGCTCAACGATCTTCAAATGAGCACTAT---GA 1195 |||| | || ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1101 TGAT-A-AT-ATGGACGATGTTCCCCTTGCTCAACGATCTTCAAATGAGCACTATGACGA 1157 Query 1196 CGAGGCTACGGAGGATAGCTGCAGCCGCAAGCTCGAAGCTGCTGTTTCGAAATGGGATGA 1255 |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1158 CGAGGCAACAGAGGATAGCTGCAGCCGCAAGCTTGAAGCTGCTGTTTCGAAATGGGATGA 1217 Query 1256 GACTGATGCTATAGTCGTCTCTGGTGCCAAGCTTACGGGAAGCGAAGTACTTGATAAAGA 1315 ||||||||||||| |||||||||||||||||||| |||| |||| ||||||||||||| Sbjct 1218 GACTGATGCTATA---GTCTCTGGTGCCAAGCTTACTGGAACCGAAATACTTGATAAAGA 1274 Query 1316 TGCAGTaaaaaaaaTGTTTGCTGTAGGCACAGCTTCTCTAGGACATGTACCAGTGCTGGA 1375 |||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 1275 TGCAGTTAAAAAAATGTTTGCTGTAGGCACAGCTTCTCTAGGACATGTAGCAGTACTGGA 1334 Query 1376 TGTGGGCCGTTTTTCCAGTGAGATTGCTGAAGCTCGTCTAGCACTTTTCCAGAAGCAGGT 1435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1335 TGTGGGCCGTTTTTCCAGTGAGATTGCTGAAGCTCGTCTAGCACTTTTCCAGAAGCAGGT 1394 Query 1436 TGAGATCACTAAGAAACATCGAGGGGATGCAAACGTTAGGTATGCCTGGCTTCCTGCAAA 1495 |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 1395 TGAGATAACTAAGAAACATCGAAGGGATGCAAACGTTAGGTATGCTTGGCTTCCTGCAAA 1454 Query 1496 GAGGGAAGTTTTATCAGCAGTGATGATGCAAGGACTTGGAGTTGGTGGAGCATTTATCAG 1555 ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| || Sbjct 1455 GAGGGAAGTTTTATCAGCAGTTATGACGCAAGGACTTGGAGTTGGTGGAGCATTTATTAG 1514 Query 1556 AAAGTCCATCTATGGTGTTGGGATCCATTTAACCGCTGCAGACTGCCCTTATTTCAGTGC 1615 ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct 1515 AAAGTCCATCTATGGTGTTGGAATCCATTTAACTGCTGCAGACTGCCCTTACTTCAGTGC 1574 Query 1616 TAGATACTGTGATGTTGACGAAAACGGAGTACGTTACATGGTTTTATGCCGTGTGATTAT 1675 |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || || Sbjct 1575 TAGATATTGTGATGTTGACGAAAATGGAGTTCGTTACATGGTTTTATGCCGTGTAATAAT 1634 Query 1676 GGGGAATATGGAGCTTCTTCGTGGTGATAAAGCTCAGTTCTTTTCTGGTGGAGAAGAATA 1735 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1635 GGGGAATATGGAGCTTCTTCGTGGTGATAAGGCTCAGTTCTTTTCTGGTGGAGAAGAATA 1694 Query 1736 TGACAATGGAGTCGATGACATTGAGAGTCCAAAGAATTACATTGTCTGGAACATCAATAT 1795 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1695 TGACAATGGAGTCGATGATATCGAGAGTCCAAAGAATTACATTGTCTGGAACATCAATAT 1754 Query 1796 GAACACACATATATTCCCGGAATTTGTTGTTAGGTTCAAGCTGTCTAATCTCCCCAATGC 1855 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1755 GAACACCCATATATTCCCGGAATTCGTTGTTAGGTTCAAGCTGTCTAATCTCCCCAATGC 1814 Query 1856 TGAAGGTAATTTGATTGCTAAGCGTGATAACTCAGGGGTCACTTTGGAAGGACCTAAGGA 1915 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1815 TGAAGGTAATTTGATTGCTAAGCGTGATAACTCAGGGGTCACTTTGGAAGGACCTAAGAA 1874 Query 1916 TCTTCCTCCTCAATTGGAGTCAAACCAGGGAGCAAGAGGTTCAGGAAGTGCAAACAGTGT 1975 |||||||| ||| |||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct 1875 TCTTCCTCGTCAGTTGGAGTCAAACCATGGAGCAGGAGGTTCAGGAAGTGCAAACAGTGT 1934 Query 1976 TGGTTCAAGCACTACAAGACCCAAATCTCCATGGATGCCATTTCCTACTCTGTTTGCAGC 2035 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1935 TGGTTCAAGCACTACAAGACCCAAATCTCCATGGATGCCTTTTCCTACTCTGTTTGCAGC 1994 Query 2036 AATCTCACATAAGGTTGCAGAGAACGACATGTTGTTGATCAATGCTGACTACCAACAACT 2095 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1995 AATCTCACATAAGGTTGCAGAGAACGACATGTCGTTGATCAATGCTGACTACCAACAACT 2054 Query 2096 GAGGGATAAGAAGATGACGAGAGCGGAGTTTGTCAGGAAACTGCGGGTGATTGTAGGAGA 2155 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 2055 GAGGGATAAGAAGATGACGAGAGCAGAGTTTGTGAGGAAACTGCGGGTGATTGTAGGAGA 2114 Query 2156 TGATCTGCTAAGGTCCACCATAACAACCCTTCAAAACCAGCCAAAGTCGAAGGAGATTCC 2215 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2115 TGATCTGCTAAGGTCCACCATAACAACGCTTCAAAACCAGCCAAAGTCGAAGGAGATTCC 2174 Query 2216 AGGAAGCATCAGAGACCATGAAGAAGGTGCAGGTGGATTGTAAGTAAAGTGGATGATGAT 2275 |||||||||||||||||||||||||||||||||||| |||| |||| | |||||||| Sbjct 2175 AGGAAGCATCAGAGACCATGAAGAAGGTGCAGGTGGGTTGTT-GTAA-G---ATGATGAT 2229 Query 2276 GATGACGAATATCAAAAGGAAGCTGCTTTTTATCTATCTACCTGCCTTT-GTGGTTCTCC 2334 || |||||||||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct 2230 GA---CGAATATCAAAAGGAAGCTGCTTTCTATCTATCTACCCGCCTTTTGTGGTTCTCC 2286 Query 2335 TTTTGACTTTTTCTAATTTTAGACTTTTGGTTTTGGGTCGGGTCGTTGGTAGAGTTTAAA 2394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2287 TTTTGACTTTTTCTAATTTTAGACTTTTGGTTTTGGGTCGGGTCGTTGGTAGAGTTTAAA 2346 Query 2395 ATGTGTCGACTTTTCTTTCTGTCGTGAAAAATCGTACTATATTATA-T--GATTCTACTT 2451 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 2347 -TGTGTCGACTTTTCTTTCTGTCGTGAAAAATCGTACTATATTATACTATGATTCTACTT 2405 Query 2452 A---GTCAATGATGTCGTTGGGTCTTTGTTTCTTTAGCTGCAAGCAAAACATTGTTGTGG 2508 | ||||||||||||| ||||||||||||| ||||||||||| || ||||||||||| Sbjct 2406 ATTAGTCAATGATGTCGCTGGGTCTTTGTTTTTTTAGCTGCAA--AA--CATTGTTGTGG 2461 Query 2509 AAGTCGTTGAATCTTGACGAAAATTTGGTCGTTAAGCCTATCGCGTGAAACTTTTCTTCA 2568 ||||||||||||||||||||||||||||||||| || |||| ||||||||||| |||||| Sbjct 2462 AAGTCGTTGAATCTTGACGAAAATTTGGTCGTTGAGTCTATAGCGTGAAACTTCTCTTCA 2521 Query 2569 CTATACTTTTTCT 2581 ||||||||||||| Sbjct 2522 CTATACTTTTTCT 2534 Score = 169 bits (91), Expect = 1e-40 Identities = 139/159 (87%), Gaps = 16/159 (10%) Strand=Plus/Plus Query 1 AAGCAAATTTTTGGTTAGAGAAAGAGGaaaaaaaCTCAGGAACCGCCGACTTAAGAATTT 60 ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 1 AAGCAAATTTTTGGTAAGAGAAAGAGG--AAAAACTCAGGAACCGCCGACTTAAGAGTTT 58 Query 61 CTTCTTCATCATCTCTCCAATATCGCCGATTATATATAAATGACTCTTC------GATTC 114 |||| ||| || | || |||||||||||||||||||||||||||| ||||| Sbjct 59 CTTC---ATC-TC-CA--AA-ATCGCCGATTATATATAAATGACTCTTCTTCTTCGATTC 110 Query 115 TGTTTCTTCTTCGTCGTCATCGCCGGCTTAGGGTTTTCT 153 |||||||||||||||||||||||||||||||||||||| Sbjct 111 AGTTTCTTCTTCGTCGTCATCGCCGGCTTAGGGTTTTCT 149 > Ahg907240 jgi|Araly1|907240|Al_scaffold_0002_321 Length=3522 Score = 473 bits (256), Expect = 2e-132 Identities = 318/348 (91%), Gaps = 3/348 (1%) Strand=Plus/Plus Query 1538 TGGTGGAGCATTTATCAGAAAGTCCATCTATGGTGTTGGGATCCATTTAACCGCTGCAGA 1597 ||||||||||||||| ||| |||||||||||||||||||||| ||||||| | |||| | Sbjct 684 TGGTGGAGCATTTATTAGAGAGTCCATCTATGGTGTTGGGATTTATTTAACTGTTGCAAA 743 Query 1598 CTGCCCTTATTTCAGTGCTAGATACTGTGATGTTGACGAAAACGGAGTACGTTACATGGT 1657 |||| |||| |||||||||||||| ||||||| |||| |||||||||| ||||||||||| Sbjct 744 CTGCTCTTACTTCAGTGCTAGATATTGTGATGGTGACAAAAACGGAGTTCGTTACATGGT 803 Query 1658 TTTATGCCGTGTGATTATGGGGAATATGGAGCTTCTTCGTGGTGATAAAGCTCAGTTCTT 1717 |||||| | ||| || |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 804 TTTATGTCATGTAATAATGGGGAATATGGAGCTTCTTCGTGGTGATAAAGCTCAATTCTT 863 Query 1718 TTCTGGTGGAGAAGAATATGACAAT-G-G-AGTCGATGACATTGAGAGTCCAAAGAATTA 1774 || |||||||||||||||||||||| | | ||||||||| || ||||||||||||||||| Sbjct 864 TTATGGTGGAGAAGAATATGACAATGGAGTAGTCGATGATATCGAGAGTCCAAAGAATTA 923 Query 1775 CATTGTCTGGAACATCAATATGAACACACATATATTCCCGGAATTTGTTGTTAGGTTCAA 1834 ||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| Sbjct 924 CATTGTCTGGAACATCAATATGAACACTCATATATTCCCCGAATTTGTTTTTAGGTTCAA 983 Query 1835 GCTGTCTAATCTCCCCAATGCTGAAGGTAATTTGATTGCTAAGCGTGA 1882 ||||||||||||| ||||| ||| |||||||||||||||||||||||| Sbjct 984 GCTGTCTAATCTCTCCAATACTGGAGGTAATTTGATTGCTAAGCGTGA 1031 > Ahg915414 jgi|Araly1|915414|Al_scaffold_0008_165 Length=573 Score = 381 bits (206), Expect = 1e-104 Identities = 242/260 (93%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 1623 TGTGATGTTGACGAAAACGGAGTACGTTACATGGTTTTATGCCGTGTGATTATGGGGAAT 1682 ||||||| |||| |||||||||| ||||||||||||||||| ||||| || ||||||||| Sbjct 154 TGTGATGGTGACAAAAACGGAGTTCGTTACATGGTTTTATGTCGTGTAATAATGGGGAAT 213 Query 1683 ATGGAGCTTCTTCGTGGTGATAAAGCTCAGTTCTTTTCTGGTGGAGAAGAATATGACAAT 1742 |||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct 214 ATGGAGCTCCTTCGTGGTGATAAAGCTCAATTCTTTTATGGTGGAGAAGAATATGACAAT 273 Query 1743 GGAGTCGATGACATTGAGAGTCCAAAGAATTACATTGTCTGGAACATCAATATGAACACA 1802 ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||| Sbjct 274 GGAGTCGATGATATCGAGAGTCCAAAGAATTACATTGTCTGGAACGTCAATATGAACACT 333 Query 1803 CATATATTCCCGGAATTTGTTGTTAGGTTCAAGCTGTCTAATCTCCCCAATGCTGAAGGT 1862 ||||||||||| ||||||||| ||| ||||||||||||||||||| ||||| |||||||| Sbjct 334 CATATATTCCCCGAATTTGTTCTTATGTTCAAGCTGTCTAATCTCTCCAATACTGAAGGT 393 Query 1863 AATTTGATTGCTAAGCGTGA 1882 |||||||||||||||||||| Sbjct 394 AATTTGATTGCTAAGCGTGA 413 Score = 178 bits (96), Expect = 2e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1538 TGGTGGAGCATTTATCAGAAAGTCCATCTATGGTGTTGGGATCCATTTAACCGCTGCAGA 1597 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 33 TGGTGGAGCATTTATTAGAAAGTCCATCTATGGTGTTGGGATCCATTTAACTGCTGCAGA 92 Query 1598 CTGCCCTTATTTCAGTGCTAGATACTGTGATGTTGACGAAAACGGAGTACGTTACAT 1654 ||||||||| |||||||||||||| |||||||||||| ||||| ||| ||||||||| Sbjct 93 CTGCCCTTACTTCAGTGCTAGATATTGTGATGTTGACAAAAACAGAGCACGTTACAT 149 > Ahg344261 jgi|Araly1|344261|fgenesh1_pg.C_scaffold_4000603 Length=1137 Score = 333 bits (180), Expect = 4e-90 Identities = 222/242 (92%), Gaps = 3/242 (1%) Strand=Plus/Plus Query 1623 TGTGATGTTGACGAAAACGGAGTACGTTACATGGTTTTATGCCGTGTGATTATGGGGAAT 1682 ||||||| |||| |||||||||| ||||||||||||||||| | ||| || ||||||||| Sbjct 817 TGTGATGGTGACAAAAACGGAGTTCGTTACATGGTTTTATGTCATGTAATAATGGGGAAT 876 Query 1683 ATGGAGCTTCTTCGTGGTGATAAAGCTCAGTTCTTTTCTGGTGGAGAAGAATATGACAAT 1742 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct 877 ATGGAGCTTCTTCGTGGTGATAAAGCTCAATTCTTTTATGGTGGAGAAGAATATGACAAT 936 Query 1743 -G-G-AGTCGATGACATTGAGAGTCCAAAGAATTACATTGTCTGGAACATCAATATGAAC 1799 | | ||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 937 GGAGTAGTCGATGATATCGAGAGTCCAAAGAATTACATTGTCTGGAACATCAATATGAAC 996 Query 1800 ACACATATATTCCCGGAATTTGTTGTTAGGTTCAAGCTGTCTAATCTCCCCAATGCTGAA 1859 || ||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||| | Sbjct 997 ACTCATATATTCCCCGAATTTGTTTTTAGGTTCAAGCTGTCTAATCTCTCCAATACTGGA 1056 Query 1860 GG 1861 || Sbjct 1057 GG 1058 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97358666220 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5