BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G33670.1 Length=1446 Score E Sequences producing significant alignments: (Bits) Value Ahg922461 jgi|Araly1|922461|scaffold_103742.1 1493 0.0 Ahg922460 jgi|Araly1|922460|scaffold_103741.1 643 0.0 Ahg931207 jgi|Araly1|931207|scaffold_303664.1 545 3e-154 Ahg913177 jgi|Araly1|913177|Al_scaffold_0001_3431 449 2e-125 Ahg932896 jgi|Araly1|932896|scaffold_400884.1 267 2e-70 > Ahg922461 jgi|Araly1|922461|scaffold_103742.1 Length=1413 Score = 1493 bits (808), Expect = 0.0 Identities = 1220/1414 (86%), Gaps = 47/1414 (3%) Strand=Plus/Plus Query 1 ATGAACTCTTGTTCCTTCCCTCTCTTCCTC-TT-T----G---TTATCTTTCTCCGGTGT 51 |||||||||| |||||||||||||||| || || | | ||||||||||||||||| Sbjct 22 ATGAACTCTTATTCCTTCCCTCTCTTCATCTTTGTCGCGGTCTTTATCTTTCTCCGGTGT 81 Query 52 TTAAGTTCCACGGGAGCTGCCACATGTCATCCTGATGACAAAGCGGGTCTTTTAGCTTTC 111 ||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||| Sbjct 82 TTAAGTTCCACGGGAGCTGCCACATGTCATCCTGATGACGAGGCAGGTCTTTTAGCTTTC 141 Query 112 AAATCGGGTATAACCCAAGATCCTTCGGGTATTCTCAGCTCATGGCAGAAA-GATATTGA 170 ||||| ||||||||||||||||||| ||||||||||||||| ||| ||||| | || | | Sbjct 142 AAATCAGGTATAACCCAAGATCCTTTGGGTATTCTCAGCTCCTGGAAGAAAAG-TACTAA 200 Query 171 CTGCTGCTCCTGGTACGGTATCTTTTGCCTCCCTACGATTCATGGCGACCGCGTCACCAT 230 ||||||||||||||| ||| |||||||||||||| | | ||| ||||||||||||| Sbjct 201 CTGCTGCTCCTGGTATGGTGTCTTTTGCCTCCCTGTTAACCCCGGCAACCGCGTCACCAT 260 Query 231 GA-TGGCATTAGACGGAAATACGGATGT-TGGTGAAACCTTTCTCTCCGGCACTATCTCA 288 | ||||| |||| |||||||| ||| | ||| |||| |||||||||||||||||||| Sbjct 261 -ACTGGCACTAGATGGAAATACAGAT-TCTGGCAAAACTTTTCTCTCCGGCACTATCTCG 318 Query 289 CCGTTGCTCGCCAAACTCCATCACCTCAACGAGATTCGCCTCACCAATCTTCGAAAGATC 348 |||||||| || || ||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 319 CCGTTGCTAGCTAAGCTCCAGCACCTCAACGAGATTCGCCTCACCGATCTTCGAAAGATC 378 Query 349 ACTGGATCTTTTCCCCACTTCCTCTTCAAATTACCAAAGCTAAGGACTGTTTACTTAGAG 408 ||||||||||||||||| ||||| ||||||||||||||||||| || ||||||||||||| Sbjct 379 ACTGGATCTTTTCCCCAATTCCTTTTCAAATTACCAAAGCTAAAGATTGTTTACTTAGAG 438 Query 409 AATAACCGTCTCTCTGGTCCCCTTCCTGCCAACATCGGTGCACTAAGTAATTTGGAAA-T 467 |||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||||| | Sbjct 439 AATAACCGTCTCTCTGGTCCCCTTCCGGACAACATCGGTGCATTAAGTAAGTTGGAAACT 498 Query 468 TTTGAGTGTGGCGGGAAACCGGTTCAGCGGTTCGATCCCAAGTTCGATGTCTAAGTTAAC 527 ||| ||| ||| |||||||||||||| |||| ||||||| |||||||| || || || || Sbjct 499 TTT-AGTCTGGAGGGAAACCGGTTCACCGGTCCGATCCCGAGTTCGATTTCCAATTTTAC 557 Query 528 TAGCTTACTCCAACTCAAGCTCAACGGTAACCGCCTTTCTGGCATCTTCCCAGACATATT 587 ||| |||||||||||||| ||||||||||||||| ||||||||||| |||| || ||||| Sbjct 558 TAGATTACTCCAACTCAAACTCAACGGTAACCGCTTTTCTGGCATCATCCCTGATATATT 617 Query 588 CAAATCCATGCGGCAACTTCGATT-TCTTGATCTCTCC-AGCAACAGATTCTCTGGAAAC 645 |||||||||||| ||||| | ||| ||| ||||||||| || |||||| |||||||||| Sbjct 618 CAAATCCATGCGACAACTCC-ATTATCTCGATCTCTCCCAG-AACAGAATCTCTGGAAAA 675 Query 646 CTTCCTTCATCGATTGCATCTCTTGCACCGACTCTTTCTACCCTTGAGGTGGGCCATAAC 705 ||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||| Sbjct 676 CTTCCTTCATCGATTGCATCTCTTGCACCGACTCTTTGGGCTCTTGAGGTGGGCCAGAAC 735 Query 706 AAGCTATCGGGGACTATCCCGGACTATTTATCGAGATTCGAGCTTCTCTCCGCATTAAAT 765 || ||||||||||||||||| ||||||||||||||||||||||| || | |||||||| Sbjct 736 AATCTATCGGGGACTATCCCAGACTATTTATCGAGATTCGAGCT-CT-TGT-CATTAAAT 792 Query 766 CTCTCTAGGAATGGGTACACAGGGGTCGTGCCGATGAGTTTTGCCAATCTGACCA-ACAT 824 ||||| |||||| | |||||||| ||||||||||||||||| ||||||| || | || | Sbjct 793 CTCTCCAGGAATTGCTACACAGGTGTCGTGCCGATGAGTTTCACCAATCTTACTAGACTT 852 Query 825 TATCTTTCTTGATCTCTCCCACAATC-TGCTTACCGGTCCATTCCCTGTCTTGAACTCAT 883 || | ||| |||||||||||||||| | || || |||||| |||||||| ||||||| | Sbjct 853 TA-CAATCTCGATCTCTCCCACAATCAT-CTAACTGGTCCACTCCCTGTCATGAACTCCT 910 Query 884 TAGGCATCGAATATCTACATCTTTCGTACAACCGATTTCACCTTGAAA-CAATCCCCGAA 942 || ||| |||||||||||||| ||||||||||||||||||||| ||| |||| ||| || Sbjct 911 CAGACATAGAATATCTACATCTCTCGTACAACCGATTTCACCTT-AAAGCAATTCCCAAA 969 Query 943 TGGGTGACCTTGTCGAAGTTCATCTACTCATTGAAGCTTGCAAAATGTGGGATCAAAATG 1002 |||||||||| ||||| | |||| ||||| |||||||| ||||||||||||||||| ||| Sbjct 970 TGGGTGACCTCGTCGAGGCTCATGTACTCGTTGAAGCTAGCAAAATGTGGGATCAAGATG 1029 Query 1003 AGCTTAGACCATTGGATGCCAGCAGACACCTCTTTC-TACCATCACATTGATTTTTCGGA 1061 ||||||||| |||||| |||| | || || |||| ||| ||||||| ||||| || || Sbjct 1030 AGCTTAGACGATTGGAAGCCAT-A--CAGCT-TTTCGTACAATCACATGGATTTGTCAGA 1085 Query 1062 AAACGAGATCTCAGGGAGTCCAATAAGGTTTTTTAACCAGATGGATTTTATGG-TGGAGT 1120 |||| | ||||||||||||||| ||||||||| ||| |||||| |||| || || ||| Sbjct 1086 AAACAAAATCTCAGGGAGTCCAGCAAGGTTTTTGAACAAGATGGCTTTTTTGACTG-AGT 1144 Query 1121 TCCATGCACCGGGGAACAAACTCC-AGTTCGACTTGGGGAAGCTA-AAGTTTGGAATCTT 1178 |||| ||| ||||||||||||| | | |||||||||||||| | | || ||||| ||||| Sbjct 1145 TCCACGCAGCGGGGAACAAACTTCGA-TTCGACTTGGGGAAAC-AGAATTTTGGGATCTT 1202 Query 1179 CTTGAAAACCCTGGATTTGTCAAGGAACTTGGTATTTGGGAAGGTACCGGTGACGGTGAC 1238 ||||| |||||||||| |||||||||||||| |||||||||| ||||| | |||| ||| Sbjct 1203 CTTGACAACCCTGGATCTGTCAAGGAACTTGATATTTGGGAACGTACCCGCGACGCTGAT 1262 Query 1239 CAGACTGCAGACACTAAACTTGAGTCAAAACCATCTTTGCGGAAAGCTTCCA-TCGACAA 1297 |||| |||||||| | |||||||||||||| |||||||||||||||||||| | ||||| Sbjct 1263 CAGATTGCAGACATTGAACTTGAGTCAAAATCATCTTTGCGGAAAGCTTCCGGT-GACAA 1321 Query 1298 AGTTCCCGGCTAGTGCTTTTGTCGA-TAACAAGTGTCTTTGCGGCTTTCCACTTTCTCCT 1356 |||||||||| || || |||| || |||| | |||||||||||||||||||||| ||| Sbjct 1322 AGTTCCCGGCCAGCGCGTTTG-CGGGTAACGACTGTCTTTGCGGCTTTCCACTTTATCCG 1380 Query 1357 TGTAAAGCTTAGGGACAAGAAAAGC-ACAGTTTT 1389 |||||||||||||| ||| |||| | ||| |||| Sbjct 1381 TGTAAAGCTTAGGGGCAATAAAA-CTACATTTTT 1413 > Ahg922460 jgi|Araly1|922460|scaffold_103741.1 Length=1403 Score = 643 bits (348), Expect = 0.0 Identities = 1072/1411 (76%), Gaps = 92/1411 (7%) Strand=Plus/Plus Query 1 ATGAACTCTTGTTCCTTCCCTCTCTTCCTCTTT---G---TTATCTTTCTCCGGTGTTTA 54 |||||||||| || ||| |||||||| ||||| | |||||||||||||||||| | Sbjct 21 ATGAACTCTTACTCTTTCACTCTCTTCATCTTTGCCGCCATTATCTTTCTCCGGTGTTCA 80 Query 55 AGTTCCACGGGAGCTGCCACATGTCATCCTGATGACAAAGCGGGTCTTTTAGCTTTCAAA 114 ||||| || ||||||||| ||||| |||||||| | ||||||||||||||||||||| Sbjct 81 AGTTCGACCAAAGCTGCCACTTGTCACCCTGATGATGAGGCGGGTCTTTTAGCTTTCAAA 140 Query 115 TCGGGTATAACCCAAGATCCTTCGGGT-ATTCTCAGCTCATGGCAGAAAGATATTGACTG 173 |||||||||||||||||||||| ||| || || | ||| ||| |||||| || ||| || Sbjct 141 TCGGGTATAACCCAAGATCCTTTGGGCCAT-CTGAACTCGTGGAAGAAAGGTACTGATTG 199 Query 174 CTGCTCCTGG-TACGGTATCTTTTGCCTCCCTACGATTCATGG-CGACCGCGTCACCATG 231 |||||| ||| | || || || | | | || | | || | | |||||||| || Sbjct 200 CTGCTCATGGGT--GG---CTGTTACTTGC--AC--T--AGGGGCAATCGCGTCAC--TG 246 Query 232 A--TGG-CATTAGACGGAAATA-CGGATGTTGGTGAAACCTTTCTCTCCGGCACTATCTC 287 | | | | ||||||| || || | |||| | || ||||||||| ||||||||||| Sbjct 247 AACTAAACCT-AGACGGATCTAGCGT-TCTTGGCGGAATCTTTCTCTCTGGCACTATCTC 304 Query 288 ACCGTTGCTCG-CCAAACTCCATCACCTCAACGAGATTCGCCTCAC-CAATCTTCGAAAG 345 |||||| | | ||||||| || ||||| | | |||| ||| | | | |||||||| Sbjct 305 CCCGTTGTT-GACCAAACTTCAACACCTTGAGGTGATTT-CCTTAATCTCTTTTCGAAAG 362 Query 346 ATCACTGGATCTTTTCCCCACTTCCTCTT-CAAATTACCAAAGCTAAGG-ACTGTTTACT 403 || ||||| |||||||| | || || || | | ||||||||||||||| || || | Sbjct 363 ATGACTGGCTCTTTTCCTCTGTTTCTTTTTCGA-TTACCAAAGCTAAGGTACC-TTAAAA 420 Query 404 T-AGAGAATAACCGTCTCTCTGGTCCCCTTCCTGCCAACATCGGTGCACTA-AGTAATTT 461 | | |||||| | |||| | ||||| ||||| ||||||||||| | ||| | | || Sbjct 421 TCAT-GAATAATCATCTCCCCGGTCCACTTCCAGCCAACATCGGCACGCTACACCAGTT- 478 Query 462 GGAA-ATTTTGAGTGTGGCGGGAAACCGGTTCAGC-GGTTC-GATCCCAAGTTCGATGTC 518 |||| | | | | | | |||||||| ||||| | ||| | |||||| ||||| || || Sbjct 479 GGAAGACCTA-ATTCTCGAGGGAAACCAGTTCA-CTGGT-CAGATCCCGAGTTCCATATC 535 Query 519 TAAGTTAACTAGCTTACTCCAACTCAAGCTCAACGGTAACCGCCTTTCTGGCATCTTCCC 578 || || ||||| ||| | | ||||| || ||| |||||||| ||||||| | || | Sbjct 536 CAATTTGACTAGGTTATTTCGGCTCAATCTTGGCGGCAACCGCCTCTCTGGCACCATCTC 595 Query 579 AGACATATTCAAATCCATG-CGGCAACTTCGATT-TCTTGATCTCTCCAGCAACAGATTC 636 ||| ||||| ||| ||||| || ||| || | ||||||||||||| ||||| ||||| Sbjct 596 AGATATATTTAAACCCATGACG--AACCTCCAACATCTTGATCTCTCCCGCAACGGATTC 653 Query 637 TCTGG-AAACCTTCCTTCATCGATTGCATCTCTTGCACCGACTCTTTC-TACCCTTGAGG 694 ||||| |||| ||||| ||||| || |||| ||||||||||| || || | | || Sbjct 654 TCTGGGAAAC-TTCCTCCATCGTTTTCATCGCTTGCACCGACCCTCAAATATC-TCGATC 711 Query 695 TGGGCCATAACAAGCTATCGGGGACTATCCCGGACTATTTATCGAGATTCGAG-CTTCTC 753 || |||| ||||| || ||||| || || |||||||||||||| ||||||||| | || Sbjct 712 TGAGCCAGAACAATCTCTCGGGAACGATTCCGGACTATTTATCAAGATTCGAGACG-CTT 770 Query 754 TCCGCATTAAATCTCTCTAGGAATGGGTACACAGGGGTCGTGCCGATGAGTTTTGCCAAT 813 ||| |||| |||||| | |||| |||| | ||||| ||||| | |||||| || ||| Sbjct 771 TCCACATTGGTTCTCTCCAAGAATCAGTACTCGGGGGTTGTGCCAACGAGTTTCGCTAAT 830 Query 814 CTGACCAACATT-ATCTTTCTTGATCTCTCCCACAATCTGCTTA-CCGGTCCATTCCCTG 871 | |||| ||| | || ||| ||||||||||||||||| |||| |||||||||||| || Sbjct 831 TTAACCAGTATTTA-CTATCTCGATCTCTCCCACAATCT-CTTAACCGGTCCATTCCATG 888 Query 872 TCTTGAACTCATTAGGCATCGAATATCTACATCTTTCGTACAACCGATTTCACCTTGAAA 931 |||||| | ||| ||||| ||||| |||| |||||||||| |||| |||| |||| Sbjct 889 CCTTGAAG--AGTAG-CATCGGCTATCTTGATCTATCGTACAACCAATTTAACCT-GAAA 944 Query 932 -CAATCCCCGAATGGGTGACCTTGTCGA--AGTTCATCTACTCATTGAAGCTTG-CAAAA 987 | || || ||||||||||||| ||||| |||| | |||||| | ||| ||| | ||| Sbjct 945 ACCATTCCGGAATGGGTGACCTCGTCGACGAGTT--TGTACTCACTAAAG-TTGGCTAAA 1001 Query 988 TGTGGGATCAAAATGAGCTTAGACC-ATTGGATGCCAGCAGAC-ACCTCTTTCTACCATC 1045 || | ||||| |||| |||| | | |||||| ||||| || ||| || | | || Sbjct 1002 TGCAGTATCAAGATGAACTTA-AGCGATTGGAGGCCAGT-GAAGACCAAATTGTTCAATA 1059 Query 1046 ACATTGATTTTTCGGAAAACGAGATCTCAGGGAGTCCAATAAGGTTTTTTAACCAGATGG 1105 |||| ||| | || ||||||||| ||||||||||||||| | |||| | ||| ||| || Sbjct 1060 ACATCGATCTGTCCGAAAACGAGTTCTCAGGGAGTCCAACATGGTTCCTAAACAAGACGG 1119 Query 1106 ATT-T-TATGGTGGAGTTCCATGCACCGGGGAACAAACTCCAGTTCGACTTGGGGAAGCT 1163 | | ||| |||||||||| || |||| ||||||||||| || ||| |||||||| | Sbjct 1120 AGGATCTAT--TGGAGTTCCAGGCGTCGGGAAACAAACTCCAATTTGACATGGGGAAGTT 1177 Query 1164 AAAGTTTGG-AA--TCTTCTTGAAAACCCTGGATTTGTCAAGGAACTTGGTATTTGGGAA 1220 | |||| | || || ||| | || | ||||| | ||||||||||||||||||||||| Sbjct 1178 GA-GTTTCGCAAAGTCA-CTT-AGAATCTTGGATCTATCAAGGAACTTGGTATTTGGGAA 1234 Query 1221 GGTACCGGTG-ACGGTGACCAGACTGCAGACACTAAACTTGAGTCAAAACCATCTTTGCG 1279 ||| || || || ||| | | |||| ||| |||||| ||||||||||| |||||||| | Sbjct 1235 GGTGCCA-TGGACAGTGGCTAAACTGAAGAAACTAAATTTGAGTCAAAATCATCTTTGTG 1293 Query 1280 GAAAGCTTCCA-TCGACAAAGTTCCCGGCTAGTGCTTTTGTCGA-TAACAAGTGTCTTTG 1337 |||||||||| | ||||||||||||||| || || |||| || |||| | |||||||| Sbjct 1294 GAAAGCTTCCGGT-GACAAAGTTCCCGGCCAGCGCGTTTG-CGGGTAACGACTGTCTTTG 1351 Query 1338 CGGCTTTCCACTTTCTCCTTGTAAAGCTTAG 1368 |||| ||||||||||||||||||||||||| Sbjct 1352 TGGCTCTCCACTTTCTCCTTGTAAAGCTTAG 1382 > Ahg931207 jgi|Araly1|931207|scaffold_303664.1 Length=1412 Score = 545 bits (295), Expect = 3e-154 Identities = 1063/1421 (75%), Gaps = 103/1421 (7%) Strand=Plus/Plus Query 1 ATGAACTCTTGTTCCTTCCCTCTCTTCCTCTT---TG---TTATCTTTCTCCGGTGTTTA 54 ||||||||||| || ||| |||| ||| |||| | |||||||||||||||||||| Sbjct 21 ATGAACTCTTGCTCATTCACTCTTTTCATCTTGGCCGCCATTATCTTTCTCCGGTGTTTA 80 Query 55 AGTTCCACGGGAGCTGCCACATGTCATCCTGATGACAAAGCGGGTCTTTTAGCTTTCAAA 114 |||||||| |||||||||||||||||||||||||| | || ||||| ||||| |||||| Sbjct 81 AGTTCCACTAGAGCTGCCACATGTCATCCTGATGACGAGGCAGGTCTCTTAGCCTTCAAA 140 Query 115 TCGGGTATAACCCAAGATCCTTCGGGTATTCTCAGCTCA-TGGCAGAAAGATATTG-ACT 172 ||||||||||||| ||||| || ||| ||| | ||| || ||| |||||| || | | | Sbjct 141 TCGGGTATAACCCGAGATCGTTTGGGCATTTTTAGC-CAGTGGAAGAAAGGTACTCCA-T 198 Query 173 GCTGCTCCTGGTACGG-TATCTTTTGCCTCCCTACGATTCATGGCGACCGCGTCACCATG 231 | || || ||| | || | || ||||| || | | | | |||||||||||||| Sbjct 199 GTTGTTCATGG-ATGGGTGTCATTTGCATCAC--C-A---A---CGACCGCGTCACCAC- 247 Query 232 A-TG-GCATTAGACGGAAATACGGATGTTGGTGAAACCTTTC-TCTCCGGCACTATCTCA 288 | || | || || ||| ||| | | |||| ||| | | | | |||||||| |||||| Sbjct 248 ACTGAGAATAAG-CGGCTCTACCGTTCTTGGCCAAAGCGT-CGTTTCCGGCACAATCTCA 305 Query 289 CCGT-TGCTCGCCAAACTCCATCACCTCAACGAGATTCGCCTCACCAATCTTCGAAAGAT 347 |||| | || |||||||| || |||||| | | | || | | ||| |||||| ||| || Sbjct 306 CCGTCT-CTGGCCAAACTTCAGCACCTCGAGGGGGTTTACTTTACCTATCTTCAAAATAT 364 Query 348 CACTGGATCTTTTCCCCACTTCCTCTTCAAATTACCAAAGCTAAGG-ACTGTTTACTTAG 406 || || ||||||||||| || || ||||||||||||||| ||| | | | || ||||| Sbjct 365 TACAGGGTCTTTTCCCCAATTTCTTTTCAAATTACCAAAGTTAAAGTA-TATTGACTTA- 422 Query 407 A-GAATAAC-CGTCTCTCTGGTCCCCTTCCTGCC-AACATCGGTGCACTAAGTAATTTGG 463 | | || | || ||||| ||||||||||| | | ||||||| ||| ||||| | |||| Sbjct 423 ACGGGTA-CTCGCCTCTCCGGTCCCCTTCC-GACTAACATCGATGCGCTAAGCCAGTTGG 480 Query 464 AA-ATTTTGAGTGTGGCGGGA-AACCGGTTCAGC-GGTTCGATCCCAAGTTCGATGTCTA 520 || | || | | ||| || | |||| ||||| | ||| | ||||| | ||| || |||| Sbjct 481 AAGAGTTA-ATTCTGGAGG-ACAACCAGTTCA-CTGGTCCAATCCCGACTTCAATATCTA 537 Query 521 AGTTAACTAGCTTA-CTCCAACTCAAG-CTCAACGGTAACCGCCTTTCTGGCATCTTCCC 578 | || ||| | ||| || ||| | ||| || |||||| | ||||||| | |||| Sbjct 538 ATTTGACTCGGTTAACTTGGT-TCA-GTCTCCGTGGAAACCGCATCTCTGGCACCATCCC 595 Query 579 AGACATATTCAAATCCATG-CGGCAACTTCGATTTCTTGATCTCTCCAGCAA-CAGATTC 636 ||| || |||||||||||| || || ||| ||||||| | ||||||| |||| | |||| Sbjct 596 AGATATTTTCAAATCCATGACG-CAGCTTGGATTTCTCGCTCTCTCCCGCAATC-GATTA 653 Query 637 TCTGG-AAACCTTCCTTCATCGATTGCATCTCTTGCACCGACTCTT-TC-TACCCTTGAG 693 || || |||| ||||| | || ||||||| ||||| || | ||| | | || | || Sbjct 654 TCCGGGAAAC-TTCCTCCGTCTTTTGCATCGCTTGCGCCAAGTCTCGTGGT-CC-TCGAA 710 Query 694 GTGGGCCATAACAAGCTATCGGGGACTATCCCGGACTATTTATCGAGATTCGAGCTTCTC 753 | ||| ||||| || ||||||| ||||| |||||||||| |||||| || | Sbjct 711 CTAAACCAAAACAATCTCTCGGGGAAGATCCCTAACTATTTATCAAGATTCAAGGAGATG 770 Query 754 TCCGCATTAAATCTCTCTAGGAATGGGTACACAGGGGTCGTGCCGATGAGTTTTGCCAAT 813 ||| |||| ||||||| | |||| ||| | ||||||||||| | |||||| |||||| Sbjct 771 TCCTCATTGTATCTCTCCAAGAATCAATACTCTGGGGTCGTGCCAAAGAGTTTCGCCAAT 830 Query 814 CTGACCAA-CATTA-TCTTTCTTGATCTCTCCCACAATCTGCTTACCGGTCCATTCCCTG 871 ||||||| | ||| || | ||||| |||||||||||||| || |||||||||||||| | Sbjct 831 ATGACCAAAC-TTAATCAT-CTTGACCTCTCCCACAATCTTCTAACCGGTCCATTCCCAG 888 Query 872 TCTTGAAC-TCATTAGGCATCGAATATCTAC-------ATCTTTCGTACAACCGATTTCA 923 |||||| | || | | | | ||| ||| |||| |||||||||||||| || Sbjct 889 ACTTGAAGATGATC-GATAAC-ATTATTTACGCTTTGGATCTATCGTACAACCGATTCCA 946 Query 924 CCTTGAAACAATCCCCGAA-TGGGTGACCT-TGTCGAAGTTC-ATCTACTCATTGAAGCT 980 ||| ||||||| || ||| |||||||||| | || | | || ||| |||| |||||||| Sbjct 947 CCTAAAAACAATACC-GAAATGGGTGACCTCT-TC-ACGATCCATCCACTCGTTGAAGCT 1003 Query 981 TGCAAAATGTGGGATCAAAATGAGCTTAGACCATTGGATGCCAGCAG--A-CACCTCTTT 1037 | ||||| |||||||| ||||| || || |||||| ||||| || | || |||| Sbjct 1004 AGTTAAATGCGGGATCAAGATGAGATTTGAAGATTGGAAGCCAG-AGGGAACAAAACTTT 1062 Query 1038 CTACCATCACATTGATTTTTCGGAAAACGAGATCTCAGGGAGTCCAATAAGGTTTTTTAA 1097 | || |||| || |||| ||||||||||||||||||||||||| | ||||| |||| Sbjct 1063 TTTCCG--ACATCAATCTTTCAGAAAACGAGATCTCAGGGAGTCCAACATGGTTTCTTAA 1120 Query 1098 CCA-G-ATG-GATT-TTATGGTGGAGTTCCATGCACCGGGGAACAAACTCC-AGTTCGAC 1152 | | | | | || | |||||| |||| || || | ||||||||||||| | |||||| Sbjct 1121 CAACGCA-GAGAATCTTATGG---AGTTTCAAGCGTCAGGGAACAAACTCCGA-TTCGAC 1175 Query 1153 TTGGGGAAGCT-AAAGTTTGGAATCTTC-TTGAAAACCCTG-GATTTGTCAAGGAACTTG 1209 |||||||||| ||| || || | | |||| | | | ||| |||||||||| ||| Sbjct 1176 ATGGGGAAGCTGAAA-TTCAAAAAAT-CGTTGAGA-CTATTAGATATGTCAAGGAATTTG 1232 Query 1210 GTATTTGGGAAGGTACCGGTGACGGTGACCAGACTGCAGACACTAAACTTGAGTCAAAAC 1269 ||||||||||||||||| || ||| | || || | | ||| ||| | ||||| ||| Sbjct 1233 GTATTTGGGAAGGTACCAACAACCGTGGCTGGATTGGAAAAACTCAACGTAAGTCACAAC 1292 Query 1270 CATCTTTGCGGAAAGCTTCCA-TCGACAAAGTTCCCGGCTAGTGCTTTTG-TCGATAACA 1327 || ||||||||||||||||| | |||||||||| ||| | | | |||| | | |||| Sbjct 1293 CAACTTTGCGGAAAGCTTCCGGT-GACAAAGTTCAAGGCCAATACGTTTGCTGG-TAACG 1350 Query 1328 AGTGTCTTTGCGGCTTTCCACTTTCTCCTTGTAAAGCTTAG 1368 | ||||| ||||||| ||||||||||||||||||||||||| Sbjct 1351 ACTGTCTCTGCGGCTCTCCACTTTCTCCTTGTAAAGCTTAG 1391 > Ahg913177 jgi|Araly1|913177|Al_scaffold_0001_3431 Length=2796 Score = 449 bits (243), Expect = 2e-125 Identities = 610/782 (78%), Gaps = 46/782 (6%) Strand=Plus/Plus Query 556 AACCGCCTTTCTGGCATCTTCCCAGACATATTCAAATCCATG-CGGCAACTTC-GATTTC 613 |||||||| || |||| | ||||||| || ||| |||| ||| | | | || ||||| Sbjct 625 AACCGCCTCTCAGGCACCGTCCCAGAAATTTTCGAATCAATGAC-GTTGC-TCAAATTTC 682 Query 614 TTGATCTCTCCAGCAACAGATTCTCT-GGAAACCTTCCTTC-ATCGATTGCATCTCTTGC 671 | ||||||||| |||| |||||||| ||| | ||||| || || ||||| || || || Sbjct 683 TAGATCTCTCCCGCAATGGATTCTCTGGGAGA-CTTCC-TCTGTCCATTGCGTCACTCGC 740 Query 672 ACCGACTCTTTCTA-CCCTTGAGGTGGGCCATAACAAGCTATCGGGGACTATCCCGGACT 730 |||||| | | ||| |||| || || |||| ||||| || |||||| | |||||||||| Sbjct 741 ACCGACAC-TCCTAGCCCTCAAGCTGAGCCAGAACAATCTCTCGGGGGCGATCCCGGACT 799 Query 731 ATTTATCGAGATTCGAGCTTCTCTCCG--CA-TTAAATCTCTCTAGGAATGGGTACACAG 787 || |||| |||||| | | || || | || ||||||| | ||| ||| | ||| Sbjct 800 ATATATCAAGATTC-AAC-AGGCT-CGAAAAGTTGGATCTCTCCAAGAACCGGTTCTCAG 856 Query 788 GGGTCGTGCCGATGAGTTTTGCCAATCTGACCAACATTATCTTTCTTGATCTCTCCCACA 847 | || || |||| | |||| | |||| ||||||| |||| | ||||||||||||||||| Sbjct 857 GTGTTGTACCGAAGGGTTTCGTCAATATGACCAATATTAACAATCTTGATCTCTCCCACA 916 Query 848 ATCTGCTTACCGGTCCATTCCCTGTCTTGAAC-TCATTAGGCATCGAATATCTACATCTT 906 |||| || || || |||||||| |||||| | | | |||||||||||| |||| Sbjct 917 ATCTTCTAACTAATCAATTCCCTGAATTGAACGTTAACA-CCATCGAATATCTTGATCTC 975 Query 907 TCGTACAACCGATTTCACCTTGAAAC-AATCCCCGAATGGGTGAC--C-TTGTCGAAGTT 962 |||||||||| |||||| || ||||| | ||| | |||||||||| | ||| || || | Sbjct 976 TCGTACAACCAATTTCAGCTGGAAACGATTCCAC-AATGGGTGACATCGTTGCCG-AG-T 1032 Query 963 CATCTACTCATTGAAGCTTGCAAAATGTGGGATCAAAATGAGCTTAGACCATTGGATGCC 1022 | ||| || |||||||| ||||||||||||||||| |||||||||||| |||||| ||| Sbjct 1033 C-TCTTCTTGTTGAAGCTAGCAAAATGTGGGATCAAGATGAGCTTAGACGATTGGAAGCC 1091 Query 1023 AGCAGACACCTCTT-T-CTACCATCACATTGATTTTTCGGAAAACGAGATCTCAGGGAGT 1080 ||| || ||| ||| | ||||||| |||| ||| | ||| |||||||||||||||||||| Sbjct 1092 AGCGGA-ACC-CTTGTACTACCATTACATCGATCTGTCGAAAAACGAGATCTCAGGGAGT 1149 Query 1081 CCA-ATAAGGTTTTTTAACCAG--ATGGATTTTATGGTGGAGTTCCATGCACCGGGGAAC 1137 | | | |||||| || |||||| |||| | | || ||||||| | || |||||||| Sbjct 1150 CTAGA-AAGGTTCTTGAACCAGACATGG--TATCTGCTGGAGTTTCGGGCGGCGGGGAAC 1206 Query 1138 AAACTCCAGTTCGACT-TGGGGAAGC-TAAAGTTTGGAATCTTC-TTGAAAACCCTGGAT 1194 |||||||| ||||| | ||||||| | | ||||||| || | | |||||||||||| Sbjct 1207 AAACTCCAATTCGA-TATGGGGAA-CTTGAAGTTTGCAA-GGACGCTAAAAACCCTGGAT 1263 Query 1195 -TTGTCAAGGAACTTGGTATTTGGGAAGGTACCGGTGACGGTGA-CCAGACTGCAGACAC 1252 || ||||||||||||||||| |||| ||| |||| || ||| | | | ||||||| || Sbjct 1264 CTT-TCAAGGAACTTGGTATTCGGGATGGTGCCGGCGATGGT-AGCTGGTCTGCAGAAAC 1321 Query 1253 TAAACTTGAGTCAAAACCATCTTTGCGGAAAGCTTCCATCGACAAAGTTCCCGGCTAGTG 1312 | |||||||||||||||||||||||||||||||||||| | |||||||||||||| |||| Sbjct 1322 TGAACTTGAGTCAAAACCATCTTTGCGGAAAGCTTCCAGCTACAAAGTTCCCGGCCAGTG 1381 Query 1313 CT 1314 || Sbjct 1382 CT 1383 > Ahg932896 jgi|Araly1|932896|scaffold_400884.1 Length=1487 Score = 267 bits (144), Expect = 2e-70 Identities = 628/854 (74%), Gaps = 63/854 (7%) Strand=Plus/Plus Query 547 CTCAACGGTAACCGCCTTTCTGGCATCTTCCCAGACATATTCAAATCCATGCGGC-AA-C 604 ||| |||||||||| || ||||| | | |||| || || ||||||||||||| | || | Sbjct 640 CTCGACGGTAACCGTCTCTCTGGAACCATCCCGGATATTTTCAAATCCATGC--CTAAGC 697 Query 605 TTCGATTTCTTGA-TCTCTC-CAGCAACAGATTCTCTGGAAAC-CTTCCTTCATCGATTG 661 | || | || | | |||||| | ||||||||||||| || || || ||| | ||||| | Sbjct 698 TCCG-TATCCTCACTCTCTCTC-GCAACAGATTCTCCGG-GACGCTCCCTCCGTCGATAG 754 Query 662 CATCTCTTGCACCGACT-CTTTCTACCCTT-GAGGTGGGCCATAACAAGCTATCGGGGAC 719 | || || || ||| | ||| | ||| ||| | || || ||||| || ||||| | Sbjct 755 CCTCACTCGCGCCG-GTGCTTGC-GTTCTTGGAGCTAGGTCAGAACAATCTCTCGGGCTC 812 Query 720 TATCCCGGA-CTATTTATCGAGATTCGA-GCTTCTCTCCGCATTAAATCTCTCTAGGAAT 777 || || || ||||||||| |||||| | | ||| | || | ||||||| | ||| Sbjct 813 GATACC-GAGCTATTTATCAAGATTC-ATGAAGCTCGACACACTGGATCTCTCCAAGAAC 870 Query 778 GGGTACACAGGGGTCGTGCCGATGAGTTTTGCCAATCTGACCAACATTATCT-TTCTTGA 836 || | | || |||||||| | |||||| ||||| ||||| || ||| || | | | Sbjct 871 CAGTTCTCCGGAGTCGTGCCAAAGAGTTTGGCCAAGCTGACAAAAATT-GCTAATATCAA 929 Query 837 TCTCTCCCACAATCTGCTTACCGGTCCATTCCCTGTCTTGAACTCATTAGGCATCGA-A- 894 |||||| |||||||| || |||| |||||||||||| || || || | | | || || | Sbjct 930 TCTCTCTCACAATCTTCTAACCGATCCATTCCCTGT-TTTAA-TCGTAAAGAAT-GACAT 986 Query 895 --T-A-TCTACATCTTTCGTACAACCGA-TTTCACCTTGAAACAATCCCCGAATGGGTGA 949 | | ||| |||| |||||||| | | |||||| | ||||| ||||| |||||||||| Sbjct 987 CTTGACCCTAGATCTGTCGTACAA-CAAGTTTCACATGGAAACGATCCCGGAATGGGTGA 1045 Query 950 CCT-TGTCGAAGTTCATCTACTCATTGAAGCTTGCAAAATGTGGGATCAAAATGAGCTTA 1008 ||| | ||| | || | | ||| |||||||| || |||||||| ||||| |||| |||| Sbjct 1046 CCTCAG-CGACGATCCTTTCCTCTTTGAAGCTGGCTAAATGTGGAATCAAGATGAACTTA 1104 Query 1009 GACCATTGG-ATGCCA-GCAGACACCT-CTTTCTA-CCATCACATTGATTTTTCGGAAAA 1064 || ||||| | | | ||| | | || | |||| || ||| ||| |||| || || Sbjct 1105 GATGATTGGAAAACAAGGCA-A-A-CTGATCTCTATGTTTC-CATCGATCTTTCAGACAA 1160 Query 1065 CGAGATCTCAGGGAGTCCAATAAGGTTTTTTAA-CCAGATGGAT-TTTATGGTGGAG-TT 1121 |||||||||||||||||| | ||||| || || | | || | || | |||| || Sbjct 1161 CGAGATCTCAGGGAGTCCGGTGAGGTTCTTGAAGGAACAAGGGTACCTA-CG-GGAGTTT 1218 Query 1122 C-CATGCACCGGGGAACAAACTCCAG-TTCGACTTGGGGAAGCTAAAG--TTTGGAAT-C 1176 | ||| ||||||||||||||| | ||||| ||||||||||| || ||| |||| | Sbjct 1219 CTAATG--TCGGGGAACAAACTCC-GATTCGATTTGGGGAAGCT-GAGTTTTTCGAATAC 1274 Query 1177 TTCTTGAAAACCCTGGATTTGTCAAGGAACTTGGTATTTGGGAAGGTACCGGTGACGG-T 1235 || | | || || ||| ||||||||||||| || || ||||| || |||| || || | Sbjct 1275 -GCTCG-AGACGCTTGATCTGTCAAGGAACTTAGTGTTCGGGAAAGTGCCGGCGA-GGTT 1331 Query 1236 GACCAGACTGCAGACACTAAACTTGAGTCAAAACCATCTTTGCGG-AAAGCTTCCATCGA 1294 | ||||| || ||||||||||||||||||||||||||||||| || ||| ||||| ||| Sbjct 1332 GGCCAGATTGAAGACACTAAACTTGAGTCAAAACCATCTTTGTGGGAAA-CTTCCGGCGA 1390 Query 1295 CAAAGTTCCCGGCTAGTGCT-TTTGTCGATAACAAGTGTCTTTGCGGCTTTCCACTTTCT 1353 | ||||| || | |||| | |||| || ||| | ||||| ||||||| ||||||| | Sbjct 1391 CCAAGTTTCCAGAAAGTG-TGTTTGCCGGGAACGACTGTCTCTGCGGCTCTCCACTTGGT 1449 Query 1354 CCTTGTAAAGCTTA 1367 | |||||||| ||| Sbjct 1450 CATTGTAAAGGTTA 1463 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54088147900 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5