BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G45100.1
Length=1494
Score E
Sequences producing significant alignments: (Bits) Value
Ahg491524 jgi|Araly1|491524|fgenesh2_kg.7__957__AT1G45100.1 1552 0.0
Ahg355852 jgi|Araly1|355852|fgenesh1_pg.C_scaffold_7003025 798 0.0
Ahg891335 jgi|Araly1|891335|Al_scaffold_0007_3321 473 1e-132
Ahg355810 jgi|Araly1|355810|fgenesh1_pg.C_scaffold_7002983 470 2e-131
Ahg906790 jgi|Araly1|906790|Al_scaffold_0003_3918 375 4e-103
Ahg937635 jgi|Araly1|937635|scaffold_501826.1 342 4e-93
Ahg355983 jgi|Araly1|355983|fgenesh1_pg.C_scaffold_7003156 322 5e-87
Ahg891097 jgi|Araly1|891097|Al_scaffold_0007_3083 248 8e-65
Ahg947382 jgi|Araly1|947382|scaffold_703611.1 228 1e-58
Ahg891584 jgi|Araly1|891584|Al_scaffold_0007_3570 130 3e-29
Ahg937636 jgi|Araly1|937636|scaffold_501827.1 128 1e-28
Ahg897736 jgi|Araly1|897736|Al_scaffold_0005_1702 119 7e-26
> Ahg491524 jgi|Araly1|491524|fgenesh2_kg.7__957__AT1G45100.1
Length=1572
Score = 1552 bits (840), Expect = 0.0
Identities = 997/1070 (93%), Gaps = 21/1070 (2%)
Strand=Plus/Plus
Query 443 AAGATGAGACACCTCCTGATTTTGTTGACGAAGTAGTCATTGTTTCCAATCTCTCTCCCC 502
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 494 AAGATGAGACACCTCTTGATTTTGTTGAGGAAGTAGTCATTGTTTCCAATCTCTCTCCCC 553
Query 503 TAACTAAAATAGCACATATCAAAGGTTTCTTCAATGGTGTTGCACAAGTTGTTAGCGTTC 562
||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||
Sbjct 554 AAACTAAAATAGCACATATCAAAGGTTTCTTCAATGATGTTGCAGAAGTCGTTAGCGTTC 613
Query 563 GACTTGTTGTAAACCACGAGGGTAAGCATGTGGGCTATGGATTTGTTGAGTTTGCTTCTG 622
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 614 GACTTATTGTAAACCACGAGGGTAAGCATGTGGGCTATGCCTTTGTTGAGTTTGCTTCTT 673
Query 623 CTTACGGAGCAAACAAGGCTCTGGAAGAGAAAAATGGTGAATATCTGCACAATCATAAGA 682
||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||| |||
Sbjct 674 CTTACGGAGCAAACAAGGCTCTGGAAGAGAAGAATGGTGACTATCTGCACGATCATCAGA 733
Query 683 TTCTGTTGATGAAAGGACATGAATCTCCTGGTTTTGCTGAGGAAGCTGCCATAACAAAAA 742
|| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 734 TTTTGTTGATGAGAGGACATGAATCTCCTGGTTTTGTTGAGGAAGCTGCCATAACAAAAA 793
Query 743 CGCTCTTTGTTGCCAATCTCCGTGACTCCATTCAGATATCAGATATCATCAATTTCTTCA 802
|||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||
Sbjct 794 CGCTCTTTGTTGCCAATCTCTGTGACACCATTAAGATATCAGATATCATCAATTTCTTCA 853
Query 803 AAGATGTTGGAGAAGTTGTTCATGTTCGACTTATTGTAAACAGCCAGGGAAAGCATGCGG 862
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 854 AAGATGTTGGAGAAGTTGTTCATGTTCGACTTGTTGTAAACAGCCAGGGCAAGCATGCGG 913
Query 863 GCTGGGGTTTTGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAGGCGCTGGTAAAGAACG 922
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 GCTGTGGCTTTGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAGGCGCTGGTAAAGAACG 973
Query 923 GTGAATATTTGCACAATTACAAGATTTCTCTTGACG-GAGCTAAGACAGCTCCACACCGT 981
| |||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||
Sbjct 974 GGGAATATTTGCACAATTACAAGATTTCTCTTGACGCG-GCTAAGACAGCTCCATACCGT 1032
Query 982 CCACCCAAGTTTTGCCTAGATCACAAGGTTTGGTACGAAGACTACCTTCGAAGAGAGAGC 1041
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1033 CCACCCAAGTTTTGCCTAGATCACAAGGTTTGGTACGAAGACTACCTTCGAAGAGAAAGC 1092
Query 1042 CTTCTCATTAAAGAAGTTGAGGGAGTGGAAGGACTTGATGAAACTCCTGATTTTCTTGAG 1101
||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1093 CTTCTGACTAAAGAAGATGAGGCAGTGGAAGGACTTGATGAAACTCCTGATTTTCTTGAG 1152
Query 1102 GAAGTTGCTGCAAGAAAAAATACAGTTTTTGTCGCCAATCTCCCTTACAACTGTCGTCTA 1161
|||||||||| ||||||||| ||| | |||||||||||||||||||||| |||||||| |
Sbjct 1153 GAAGTTGCTGTAAGAAAAAAGACACTCTTTGTCGCCAATCTCCCTTACAGCTGTCGTCGA 1212
Query 1162 ATAGTACCAACTATCATCAATTTCTTCAGTGATGTTGGAGAAATTGTTCATATTCGAATT 1221
|| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 1213 ATTGTACCAACTATCATCAATTTCTTCAAAGATGTTGGAGAAATTGTTCATGTTCGAATT 1272
Query 1222 ATTGTAGACCACATGGGTGAGCCTGTGGGCTGTGGCTTTGTGGAGTTTAATTCTTCCAAC 1281
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 1273 ATTGTAGACCACATGGGTGTGCCTGTGGGCTGTGGCTTTGTGGAGTTTAATTCTTCGAAC 1332
Query 1282 GAAGCAGAGAAGGCGCTGCAAAAGAAGACTGGT-A--A--G-A---TTTCTGTTGACGTG 1332
|||||||||||||||||||||||||||| |||| | | | | ||||||||||||||
Sbjct 1333 GAAGCAGAGAAGGCGCTGCAAAAGAAGAATGGTCAGTATAGTAAGATTTCTGTTGACGTG 1392
Query 1333 GCTGAGATAGCTTCATACCCTGTTGGACCCAAGTACAACGTTGCTAAGAAGCTTTGGTAC 1392
||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1393 GCTGAGATAGCTTTATACCCTGTTGGACCAAAGTACAACGTTGCAAAGAAGCTTTGGTAC 1452
Query 1393 GAAGACAACCTTCGACGAGGAATGCTTCTGA-----G-GA---CCAAACCGGATCTGAAG 1443
||||| |||||||||||||||| |||| ||| | || || ||||||||||||||
Sbjct 1453 GAAGATAACCTTCGACGAGGAAGGCTTATGATAAAAGAGAAGACCGAACCGGATCTGAAG 1512
Query 1444 AAACCTTCACTGATGAGTTTATGCTGCGGTCAGAGGGTTACCCTTCTCTG 1493
|||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 1513 AAACCTTCACTGATGAGTTTATGCTGCGGTCAGAAGGTTACC-TTCTCTG 1561
Score = 568 bits (307), Expect = 6e-161
Identities = 405/450 (90%), Gaps = 16/450 (4%)
Strand=Plus/Plus
Query 1 ATGGAGAGTTCTAGCAAGGAATCGGCCGCCAAAGTTGTTCGATTGGGTAAGCGAAAGCCG 60
|||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1 ATGGAGAGTTCTAGCAAGGAATCGGCCGCCAAAGTTCTTTTATTGGGTAAGCGAAAGCCG 60
Query 61 GAAGCTGATTTGGAGACCAAACCTTTTCTCAGGAAACATAAGGAAACGTCTGAGGAGAAG 120
|||| |||| |||||||||||| ||| |||||| ||||||||||| || |||||||||
Sbjct 61 GAAGATGATCCGGAGACCAAACCAATTCGCAGGAAGCATAAGGAAACATCGGAGGAGAAG 120
Query 121 GAGACAACGGAAGGATTTGCTTGTAGTCTTGAGC--AA--C--A--A-GATAATCTAATC 171
|||||||||||||||||||| ||||||||| ||| || | | | |||||||||| |
Sbjct 121 GAGACAACGGAAGGATTTGCCTGTAGTCTTCAGCAGAATTCTGAGCAGGATAATCTAACC 180
Query 172 TCAGCGAAGGCTGTTTCCGTAACGCTCTTTGTATCCGAG-CTCTCTAGGCAAACAAAAAT 230
||||||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||
Sbjct 181 TCAGCGAAGGCTGCTTCCGTAACGCTCTTTGTCTCCG-GTCTCTCTAGGCAAACAAAAAT 239
Query 231 TTCAGATATCATCGATTTCTTCAGTGATGTTGGAGAAGTTGTTAATGTTCGAATTTGCT- 289
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 240 ATCAGATATCATCGATTTCTTCAGTGATGTTGGAGAAGTTGTTCATGTTCGAATTTG-TG 298
Query 290 TAAGCCAC-ACGGGAAG-CTGTTGCGTTCTGGCTTTGTTGAGTTTTCTTCTGCTAGTGAG 347
||| |||| | ||| || | |||||| |||||||||||||||||| ||||||||||||||
Sbjct 299 TAACCCACGA-GGGTAGGCGGTTGCGCTCTGGCTTTGTTGAGTTTACTTCTGCTAGTGAG 357
Query 348 GCAAACAAGGCACTGGAAAAGAAGAATGGTGAATATTTGCACGATCAAGAGATTTCTCTT 407
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 358 GCAAACAAGGCAATGGAAAAGAAGAACGGTGAATATTTGCACGATCAAGAGATTTCTCTT 417
Query 408 AAAGTTGCTCAGACAAGTCCATACCGTCCA 437
| ||| |||||||||| |||||||||||||
Sbjct 418 AGAGTGGCTCAGACAACTCCATACCGTCCA 447
Score = 137 bits (74), Expect = 2e-31
Identities = 184/234 (79%), Gaps = 19/234 (8%)
Strand=Plus/Plus
Query 701 ATGAATCTCCTGGTTTTGC-TGAGGAAGCTGCCAT-A-ACAAAA-ACGCTCTTTGTTGCC 756
||||| |||||| |||| | |||||||| ||| | | | |||| || |||||||| |||
Sbjct 1130 ATGAAACTCCTGATTTT-CTTGAGGAAGTTGCTGTAAGAAAAAAGACACTCTTTGTCGCC 1188
Query 757 AATCTCCGTGAC-TCCAT--TCAG-A---TATCAGA-TATCATCAATTTCTTCAAAGATG 808
||||||| | || | | || | | || || | |||||||||||||||||||||||
Sbjct 1189 AATCTCCCTTACAGCTGTCGTC-GAATTGTACCA-ACTATCATCAATTTCTTCAAAGATG 1246
Query 809 TTGGAGAAGTTGTTCATGTTCGACTTATTGTAAAC-AGCCA-GGGAAAGCATGCGGGCTG 866
|||||||| |||||||||||||| |||||||| || | | | ||| || || ||||||
Sbjct 1247 TTGGAGAAATTGTTCATGTTCGAATTATTGTAGACCA-C-ATGGGTGTGCCTGTGGGCTG 1304
Query 867 GGGTTTTGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAGGCGCTGGTAAAGAA 920
|| ||||| |||||| |||| | ||||||||||||||||||||| ||||||
Sbjct 1305 TGGCTTTGTGGAGTTTAATTCTTCGAACGAAGCAGAGAAGGCGCTGCAAAAGAA 1358
> Ahg355852 jgi|Araly1|355852|fgenesh1_pg.C_scaffold_7003025
Length=1905
Score = 798 bits (432), Expect = 0.0
Identities = 841/1028 (82%), Gaps = 70/1028 (7%)
Strand=Plus/Plus
Query 443 AAGATGAGACACCTCCTGATTTTGTTGACG-AAGTAGTCATTGTTTCCAATCTCTCTCCC 501
|||||||||||||||||| ||||||||| | ||||| || ||||| ||||||||||||||
Sbjct 797 AAGATGAGACACCTCCTGGTTTTGTTGA-GAAAGTACTCTTTGTTGCCAATCTCTCTCCC 855
Query 502 CTAACTAAAATAGCACATATCAAAGGTTTCTTCAATGGTGTTGCACAAGTTGTTAGCGTT 561
| |||||||||| || ||||||||| ||||| ||| | ||||| | |||||||||| |||
Sbjct 856 CAAACTAAAATATCAGATATCAAAGATTTCTGCAAAGATGTTGGAGAAGTTGTTAGTGTT 915
Query 562 CGACTTGTTGTAAACCACGAGGGTAAGCATGTGGGCTATGGATTTGTTGAGTTTGCTTCT 621
|||||| |||||||||||||| |||||||||| |||||||| ||||||||||||||||||
Sbjct 916 CGACTTATTGTAAACCACGAGTGTAAGCATGTTGGCTATGGCTTTGTTGAGTTTGCTTCT 975
Query 622 GCTTACGGAGCAAACAAGGCT-CTGGAAGAGAAAAATGGTGAATATCTGCACAATCATAA 680
||| ||| ||| || |||| | |||||| |||| |||||||||||| | ||| |||||||
Sbjct 976 GCTAACGCAGCGAAGAAGG-TGCTGGAAAAGAAGAATGGTGAATATTTACACGATCATAA 1034
Query 681 GATTCTGTTGATGAAAGGAC---ATGAATCTCCTGGTTTTGCTGAGGA-AGCTGCCAT-A 735
|||| ||||||||||||||| |||||||||| ||||| ||| || || ||| | |
Sbjct 1035 GATTTTGTTGATGAAAGGACTTGATGAATCTCCCAATTTTGTTGA-GACAGTTGCTGTAA 1093
Query 736 -ACAAAA-ACGCTCTTTGTTGCCAATCTC-CGTGACTC-CATTCAGATATCAGATATCAT 791
| |||| || |||||||||||| ||||| | | || | | | | |||||| |||||||
Sbjct 1094 GAAAAAAGACACTCTTTGTTGCCCATCTCTC-TCAC-CAAACTGAAATATCACATATCAT 1151
Query 792 CAATTTCTTCAAAGATGTTGGAGAAGTTGTTCATGTTCGACTTATTGTAAAC-A-GCCAG 849
|| ||||||||||||| |||||||||||||||||||| ||||||||||| || | | | |
Sbjct 1152 CAGTTTCTTCAAAGATATTGGAGAAGTTGTTCATGTTAGACTTATTGTAGACTATG-C-G 1209
Query 850 GGAAAGCATGCGGGCTG-GGGTTTTGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAGGC 908
|| |||||| |||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct 1210 GGCAAGCATTTGGGC-GATGGCTTTGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAGGC 1268
Query 909 GCTGGTAAAGAA---CGGTGAATATTTGCACAATTACAAGATTTCT-CTTGACG-GAGCT 963
| ||| |||||| |||||||||||||||| || |||||||| | ||||| | | |||
Sbjct 1269 GTTGGAAAAGAAGAACGGTGAATATTTGCACGATCGCAAGATTT-TACTTGATGTG-GCT 1326
Query 964 AAGACAGCTCCACACCGTCCAC--CC-AAGTTTTGCCTAGATCACAAGGTTTGGTACGAA 1020
|||||||||||| ||| ||||| || |||| |||| ||||||||||||||||||| |||
Sbjct 1327 AAGACAGCTCCATACCCTCCACTACCCAAGTATTGCATAGATCACAAGGTTTGGTATGAA 1386
Query 1021 GACTACCTTCGAAGAGAGA-GCCTTCTCATTA-AAGAAGTTGAGGGAGTGGAAGGACTTG 1078
|||||||||||| |||| | ||||||| || | |||||| ||||| |||||| |||||||
Sbjct 1387 GACTACCTTCGACGAGA-ACGCCTTCTGAT-AGAAGAAGATGAGGCAGTGGATGGACTTG 1444
Query 1079 ATGAAACTCCTGATTTTCTTGAGGAAGTTGCTGCAAGAAAAAATACAG-T-TTTTGTCGC 1136
||||| ||||||||||| ||||||||||||| | ||||||||| || | | |||| | ||
Sbjct 1445 ATGAATCTCCTGATTTTATTGAGGAAGTTGCGGTAAGAAAAAAGAC-GCTCTTTTTT-GC 1502
Query 1137 CAATCTCCCTTACA-ACTGTCGTCTAATAGTACCAACTATCATCAATTTCTTCAGTGATG 1195
|||||| ||||| | | | | |||| | | || ||||||||||||||||| ||||
Sbjct 1503 AAATCTCTTTTACAGAAT-TAG---AATA-T-CAAA-TATCATCAATTTCTTCAAAGATG 1555
Query 1196 TTGGAGAAATTGTTCATATTCGAATTATTGTAGACCACATGGGTGAGCCTGTGGGCTGTG 1255
|||||||| ||||| | ||||| |||||||| |||||| |||||||| |||| ||||||
Sbjct 1556 TTGGAGAAGTTGTTGGTGTTCGACTTATTGTAAACCACAGGGGTGAGCATGTGTGCTGTG 1615
Query 1256 GCTTTGTGGAGTTTAATTCTTCCAACGAAGCAGAGAAGGCGCTGCAAAAGAAGACTGGT- 1314
||||||| |||||| |||| | | |||||| ||||||||||||||| ||||| ||||
Sbjct 1616 GCTTTGTTGAGTTTTCTTCTGCTGATGAAGCAAAGAAGGCGCTGCAAATGAAGAATGGTG 1675
Query 1315 AAGATTTC-T-G-T--T------------GACGTGGCTGAGATAGCTTCATACCCTGTTG 1357
|| ||||| | | | | ||||||| | || ||||| ||||||| |
Sbjct 1676 AAAATTTCCTTGGTCGTTTTATTTTTCTTGACGTGGTTAAGTTAGCTCCATACCCAATCC 1735
Query 1358 GACCCAAGTACAACGTTGCTA-AGAAGCTTTGGTACGAAGACAACCTTCGACGAGGAATG 1416
|||||||||||||| |||| | |||||||||||| |||||| ||||||||||| |||
Sbjct 1736 GACCCAAGTACAACCTTGC-AGAGAAGCTTTGGTTCGAAGAGTACCTTCGACGAC-AATA 1793
Query 1417 C-TTCTGA 1423
| ||||||
Sbjct 1794 CCTTCTGA 1801
Score = 191 bits (103), Expect = 1e-47
Identities = 197/241 (82%), Gaps = 12/241 (5%)
Strand=Plus/Plus
Query 701 ATGAATCTCCTGGTTTTGCTGAGGAAGCTGCCAT-A-ACAAAA-ACGCTCTTTGTTGCCA 757
|||||||||||| |||| |||||||| ||| | | | |||| ||||||||| |||| |
Sbjct 1445 ATGAATCTCCTGATTTTATTGAGGAAGTTGCGGTAAGAAAAAAGACGCTCTTTTTTGCAA 1504
Query 758 ATCTCCGTGACTCCATTCAG-ATATCAGATATCATCAATTTCTTCAAAGATGTTGGAGAA 816
||||| | || ||| || |||||| ||||||||||||||||||||||||||||||||
Sbjct 1505 ATCTCTTTTACAGAATT-AGAATATCAAATATCATCAATTTCTTCAAAGATGTTGGAGAA 1563
Query 817 GTTGTTCATGTTCGACTTATTGTAAAC-AGCCAGGGAA-AGCATGCGGGCTGGGGTTTTG 874
|||||| ||||||||||||||||||| | | |||| |||||| | |||| || ||||
Sbjct 1564 GTTGTTGGTGTTCGACTTATTGTAAACCA-C-AGGGGTGAGCATGTGTGCTGTGGCTTTG 1621
Query 875 TTGAGTTTGCTTCTGCTAACGAAGCAGAGAAGGCGCTGGTAA--A-GAACGGTGAATATT 931
|||||||| |||||||| | |||||| ||||||||||| || | ||| |||||| |||
Sbjct 1622 TTGAGTTTTCTTCTGCTGATGAAGCAAAGAAGGCGCTGCAAATGAAGAATGGTGAAAATT 1681
Query 932 T 932
|
Sbjct 1682 T 1682
> Ahg891335 jgi|Araly1|891335|Al_scaffold_0007_3321
Length=1683
Score = 473 bits (256), Expect = 1e-132
Identities = 575/723 (80%), Gaps = 46/723 (6%)
Strand=Plus/Plus
Query 714 TTTTGCTGAGGAAGCTGCCAT-A-ACAAAA-ACGCTCTTTGTTGCCAATCTCCGTGACTC 770
||||| ||||| || |||||| | | |||| ||||| ||| ||||||||||| || ||
Sbjct 846 TTTTGTTGAGGCAGTTGCCATAAGAAAAAAGACGCTATTTATTGCCAATCTCTGTCACAA 905
Query 771 CATTCAGA-TATCAGATATCATCAATTTCTTCAAAGATGTTGGAGAAGTTGTTCATGTTC 829
| | | | |||| | || |||||||||||||||||||||||||||||||||||| |||
Sbjct 906 AACT-AAACCATCACACATTATCAATTTCTTCAAAGATGTTGGAGAAGTTGTTCATATTC 964
Query 830 GACTTATTGTAAAC-AGCCAGGGAAAGCATGCGGGCTGGGGTTTTGTTGAGTTTGCTTCT 888
||||||||||| || | |||| |||| || ||||| || ||||||| ||||||||||
Sbjct 965 GACTTATTGTAGACCATA-AGGGCAAGCTTGTGGGCTATGGCTTTGTTGTGTTTGCTTCT 1023
Query 889 GCTAACGAAGCAGAGAAGGCGCTGGTAAAGAA---CGGTGAATATTTGCACAATTACAAG 945
|||||||||||| ||||||| || | |||||| |||||||||||||||| || ||||
Sbjct 1024 GCTAACGAAGCAAAGAAGGCACTAGAAAAGAAGAACGGTGAATATTTGCACGATCGCAAG 1083
Query 946 ATTTCTCTTG-ACGGAG-CTAAGACAGCTCCACACCGTCCACCCAAGTTTTGCCTAGATC 1003
|||||||||| | | || ||| || ||||||| ||| | |||| |||| |||| ||||||
Sbjct 1084 ATTTCTCTTGGA-G-AGGCTACGATAGCTCCATACCCTACACCAAAGTATTGCATAGATC 1141
Query 1004 ACAAGGTTTGGTACGAAGACTACCTTCGAAGAGAGA-GCCTTCTCATTAAAGAAGTTGAG 1062
||||||||||| ||||||||||||||||| |||| | || |||| |||||| ||||
Sbjct 1142 ACAAGGTTTGGAACGAAGACTACCTTCGACGAGAAAAGC-TTCTGGCGGAAGAAGATGAG 1200
Query 1063 GGAGTGGAAGGACTTGATGAAACTCCTGATTTTCTTGAGGAAGTTGCTGCAAGAAAAAAT 1122
| |||||||||||||||| ||||||||| |||| ||||||| ||| | ||| |||||
Sbjct 1201 GCAGTGGAAGGACTTGATAAAACTCCTGTTTTTGTTGAGGACCTTGGGGTAAGGAAAAAG 1260
Query 1123 ACAGTT-TTTGTCGCCAATCTCCCTTACAACTGTCGTCTAATAGTACCAACTATCATCAA 1181
|| | | ||||| ||||||||| | |||| | | ||| | || | ||||||||
Sbjct 1261 AC-GCTCTTTGTTGCCAATCTCTATCACAAAACTAGACTA-TC--AC-A--TATCATCAG 1313
Query 1182 TTTCTTCAGTGATGTTGGAGAAATTGTTCATATTCGAATTATTGTAGACCACATGGGTGA 1241
|||||||| |||||||||||| ||||| | ||||| ||||||||||||||||| ||||
Sbjct 1314 TTTCTTCAAAGATGTTGGAGAAGTTGTTTGTGTTCGACTTATTGTAGACCACATGAGTGA 1373
Query 1242 GCCTGTGGGCTGTGGCTTTGTGGAGTTTAATTCTTCCAACGAAGCAGAGAAGGCGCT-GC 1300
|| | |||||||||||||||| |||||| |||||| |||||||| |||||||||| |
Sbjct 1374 GCGTTTGGGCTGTGGCTTTGTTGAGTTTGCTTCTTCTTACGAAGCAAAGAAGGCGCTAGA 1433
Query 1301 AA--AAGA--AG-A---C-T----GG-T-AAG--ATTTCTGTTGACGTGGCTGAGATAGC 1343
|| |||| || | | | || | || |||| | ||||||||||||||||| |
Sbjct 1434 AACGAAGATTAGTAAAGCATTAATGGGTCAATTTATTTTTCTTGACGTGGCTGAGATACC 1493
Query 1344 T-TCATACCCTGTTGGACCCAAGTACAACGTTGCTA-AGAAGCTTTGGTACGAAGACAAC 1401
| | || |||| | |||||||||||||| |||| | |||||||||||||||||||| ||
Sbjct 1494 TCT-ATGCCCTCTCCGACCCAAGTACAACCTTGC-AGAGAAGCTTTGGTACGAAGACTAC 1551
Query 1402 CTT 1404
|||
Sbjct 1552 CTT 1554
Score = 156 bits (84), Expect = 5e-37
Identities = 148/178 (83%), Gaps = 7/178 (4%)
Strand=Plus/Plus
Query 738 AAAA-ACGCTCTTTGTTGCCAATCTCCGTGACTCCATTCAGA-TATCAGATATCATCAAT 795
|||| ||||||||||||||||||||| | || | | ||| ||||| ||||||||| |
Sbjct 1256 AAAAGACGCTCTTTGTTGCCAATCTCTATCACAAAACT-AGACTATCACATATCATCAGT 1314
Query 796 TTCTTCAAAGATGTTGGAGAAGTTGTTCATGTTCGACTTATTGTAAAC-AGCCAGG-GAA 853
||||||||||||||||||||||||||| |||||||||||||||| || | | | | |
Sbjct 1315 TTCTTCAAAGATGTTGGAGAAGTTGTTTGTGTTCGACTTATTGTAGACCA-C-ATGAGTG 1372
Query 854 AGCATGCGGGCTGGGGTTTTGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAGGCGCT 911
||| | |||||| || |||||||||||||||||| || |||||||| ||||||||||
Sbjct 1373 AGCGTTTGGGCTGTGGCTTTGTTGAGTTTGCTTCTTCTTACGAAGCAAAGAAGGCGCT 1430
> Ahg355810 jgi|Araly1|355810|fgenesh1_pg.C_scaffold_7002983
Length=1788
Score = 470 bits (254), Expect = 2e-131
Identities = 578/726 (80%), Gaps = 56/726 (8%)
Strand=Plus/Plus
Query 707 CTCCTGGTTTTGCTGAGGAAGCTGCCAT-A--ACAAAAACGCTCTTTGTTG-CCA-ATCT 761
|||||| ||||| ||||| || || | | | ||||| ||||||||||||| ||| |||
Sbjct 971 CTCCTGATTTTGTTGAGGCAGTTGGCGTAAGTACAAAGACGCTCTTTGTTGCCCATCTCT 1030
Query 762 C-CGTGACTCCATTCAGATATCAG-ATATCATCAATTTCTTCAAAGATGTTGGAGAAGTT 819
| ||| | | | | ||||| | ||||||| ||||||||||| |||||||||||||||
Sbjct 1031 CTCGT-A--AAACTGAAATATC-GCATATCATAAATTTCTTCAATGATGTTGGAGAAGTT 1086
Query 820 GTTCATGTTCGACTTATTGTAAAC-AGCCAGGGAAAGCATGCGGGCTGGGGTTTTGTTGA 878
|||||||||||||||||| ||||| | | | || |||||| |||||| || ||||| ||
Sbjct 1087 GTTCATGTTCGACTTATTCTAAACCA-CAATGGCAAGCATTTGGGCTGTGGCTTTGTAGA 1145
Query 879 GTTTGCTTCTGCTAACGAAGCAGAGAAGGCGC-TGGTAAAGAA---CGGTGAATATTTGC 934
||| | |||||||||||||||| |||||||| || |||||| ||||||| |||||
Sbjct 1146 GTTCGGTTCTGCTAACGAAGCAAAGAAGGCGTATGA-AAAGAAAAACGGTGAAAATTTGA 1204
Query 935 ACAATTACAAGATTTCTCTTGACG-GAGCTAAGACAGCTCCACACCGTCCACCCAAGTTT 993
|| ||| |||||||| |||||| | | ||||||||||||||| ||| ||||||||||| |
Sbjct 1205 ACGATTGCAAGATTTTTCTTGAAGTG-GCTAAGACAGCTCCAGACCCTCCACCCAAGTAT 1263
Query 994 TGCCTAGATCACAAGGTTTGGTACGAAGACTACCTTCGAAGAGAGA-GCCTTCTCATTA- 1051
||| ||||||||| ||||||||||||||||||||||||| |||| | ||||||| || |
Sbjct 1264 TGCTTAGATCACATGGTTTGGTACGAAGACTACCTTCGACGAGA-ACGCCTTCTGAT-AG 1321
Query 1052 AAGAAGTTGAGGGAGTGGAAGGACTTGATGAAACTCCTGATTTTCTTGAGGAAGTTGCTG 1111
|||||| |||| ||||||||||||||||||| |||| | |||| ||||||||| ||| |
Sbjct 1322 AAGAAGATGAGACAGTGGAAGGACTTGATGAACCTCCCGTTTTTGTTGAGGAAGCTGCCG 1381
Query 1112 CAAGAAAAAATACAGTT-TTTGTCGCCAATCTCCCTTACAACTGTCGTCTAATAGT-ACC 1169
| ||||||||| | | ||| | ||||||||| || |||| | | |||| | ||
Sbjct 1382 TACTAAAAAATAC-GCTCTTTATTGCCAATCTCTCTCACAAAA--C-TAAAATA-TCAC- 1435
Query 1170 AACTATCATCAATTTCTTCAGTGATGTTGGAGAAATTGTTCATA-TTCGAATTATTGTAG 1228
| ||||||||| ||||||| |||||||||||| || ||| ||||| ||||||||
Sbjct 1436 A--TATCATCAAATTCTTCAAAGATGTTGGAGAAGTT-TTCCGCGTTCGACTTATTGTAA 1492
Query 1229 ACCACATGGGTGAGCCTGTGGGCTGTGGCTTTGTGGAGTTTAATTCTTCCAACGAAGCAG 1288
|||||| |||||||| |||||| ||||||||||| |||||| ||| | || ||||||
Sbjct 1493 ACCACAGGGGTGAGCATGTGGGTTGTGGCTTTGTCGAGTTTGCCTCTGCTAATGAAGCAA 1552
Query 1289 AGAAGGCGCTGCAAAAGAAGACTGGT-AAGATTT-C----T-----G-TT------GACG 1330
||||||||||||||||||||| |||| || |||| | | | || ||||
Sbjct 1553 AGAAGGCGCTGCAAAAGAAGAATGGTGAAAATTTGCGCAGTCATAAGATTTTTCTTGACG 1612
Query 1331 TGGCTGAGATAGCTTCATACCCTGTTGGACCCAAGTACAACGTTGCTA-AGAAGCTTTGG 1389
||||||||| |||| |||||||| | |||||||||||||| |||| | |||||||||||
Sbjct 1613 TGGCTGAGAGAGCTCCATACCCTCTCCGACCCAAGTACAACCTTGC-AGAGAAGCTTTGG 1671
Query 1390 TACGAA 1395
|||||
Sbjct 1672 CACGAA 1677
> Ahg906790 jgi|Araly1|906790|Al_scaffold_0003_3918
Length=1443
Score = 375 bits (203), Expect = 4e-103
Identities = 407/502 (81%), Gaps = 27/502 (5%)
Strand=Plus/Plus
Query 475 GTAGTCATTGTTTCCAATCTCTCTCCCC---TAACTAAAATAGCACATATCAAAGGTTTC 531
||| || ||||| ||||||||||||||| ||||||| | ||||||||| ||||
Sbjct 445 GTACTCTTTGTTGCCAATCTCTCTCCCCAAACAACTAAACTTTCACATATCACCCTTTTC 504
Query 532 TTCAATGGTGTTGCACAAGTTGTTAGCGTTCGACTTGTTGTAAACCACGAGGGTAAGCAT 591
||||| | ||||| | | |||||||| ||||||||| |||||||||| ||||||||||||
Sbjct 505 TTCAAAGATGTTGGAGATGTTGTTAGTGTTCGACTTATTGTAAACCAGGAGGGTAAGCAT 564
Query 592 GTGGGCTATGGATTTGTTGAGTTTGCTTCTGCTTACGGAGCAAACAAGGCTCTGGAAGAG 651
||||||||||| ||||||||||||||| ||||| || |||||| ||| |||||| |
Sbjct 565 GTGGGCTATGGCTTTGTTGAGTTTGCTACTGCTCACCAAGCAAAGTGGGCGCTGGAAAAT 624
Query 652 AAAAATGGTGAATATC-TGCACAATCATAAGATTCTGTTGATGAAAGGAC---AT-GAAT 706
|| ||||||||||| | ||||| ||||||||||| | |||||| |||||| || |||
Sbjct 625 AAGAATGGTGAATA-CTTGCACGATCATAAGATTTTCTTGATGCAAGGACTTGATGGAA- 682
Query 707 CTCCTGGTTTTGCTGAGGAAGCTGCCATAA-CAA-AA-ACGCTCTTTGTTGCCAATCTC- 762
|||| | || |||||||| || |||||||| || || || ||||||||| ||||||||
Sbjct 683 CTCCAGATTCTGCTGAGGCAGTTGCCATAAGAAATAAGACACTCTTTGTTACCAATCTCT 742
Query 763 CGTGAC-T--CCATTCAGATATCAGATATCATCAATTTCTTCAAAGATGTTGGAGAAGTT 819
| | | | | | | |||||| ||||||||||||||||||||||||||||| |||||
Sbjct 743 C-TCCCATAACAACAAAAATATCACATATCATCAATTTCTTCAAAGATGTTGGACAAGTT 801
Query 820 GTTCATGTTCGACTTATTGTAAACAGCCAGGGA--AAGCAT-GCGGGCTGGGGTTTTGTT 876
|||||||||||||||||||| | | ||| || || || | ||| | || ||||||
Sbjct 802 GTTCATGTTCGACTTATTGT--AGA-CCAAAGATGCAGGATGGTGGGTTTTGGCTTTGTT 858
Query 877 GAGTTTGCTTCTGCTAACGAAGCAGAGAAGGCGCTGGTAAAGAAC--GG-TGAATATTTG 933
||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||
Sbjct 859 GAGTTTGCTTCTGCTAACGAAGCAGAGAAGGCGCTGGAAAAGAAGAAGGGTGAATATTTG 918
Query 934 CACAATTACAAGATTTCTCTTG 955
|||||| | ||||| ||||||
Sbjct 919 CACAATCGCGAGATTGCTCTTG 940
Score = 191 bits (103), Expect = 1e-47
Identities = 213/264 (81%), Gaps = 15/264 (6%)
Strand=Plus/Plus
Query 1166 TACCAACTATCATCAATTTCTTCAGTGATGTTGGAGAAATTGTTCATATTCGAATTATTG 1225
|||||| ||||||||| || |||| | |||||||||| |||||| | | || ||||||
Sbjct 1133 TACCAAATATCATCAAGTTATTCAAAGTTGTTGGAGAAGTTGTTCGTGCTGGAGTTATTG 1192
Query 1226 TAGACCACAT-GGGTGAGCCTGTGGGCTGTGGCTTTGTGGAGTTTAATTCTTCCAACGAA 1284
|||||||| | |||||||| |||||||||| ||||||| |||||| |||| | | |||
Sbjct 1193 TAGACCAC-TGGGGTGAGCATGTGGGCTGTTGCTTTGTTGAGTTTGCTTCTGCTGATGAA 1251
Query 1285 GCAGAGAAGGCGCTGCAAAAGAAGACTGG---TAAGATTTCTGTTGACGTGGCTGAGATA 1341
||| |||||||| ||||| || || ||| ||| ||| |||| ||||||||||||||
Sbjct 1252 GCAAAGAAGGCGGTGCAAGTGAGGAATGGTTATAATTTTTTTGTTAACGTGGCTGAGATA 1311
Query 1342 G--C-TTCATACCCTGTT-GGACCCAAGTACAACG-TTGCTA-AGAAGCTTTGGTACGAA 1395
| | | |||||||| || ||| ||| ||||| | |||| | |||||||||||||||||
Sbjct 1312 GATCGTCCATACCCT-TTCCGACTCAATTACAA-GCTTGC-AGAGAAGCTTTGGTACGAA 1368
Query 1396 GACAACCTTCGACGAGGAATGCTT 1419
|||||||||||||||| || ||||
Sbjct 1369 GACAACCTTCGACGAG-AAGGCTT 1391
> Ahg937635 jgi|Araly1|937635|scaffold_501826.1
Length=1229
Score = 342 bits (185), Expect = 4e-93
Identities = 493/633 (78%), Gaps = 56/633 (9%)
Strand=Plus/Plus
Query 701 ATGAATCTCCTGGTTTTGCTGAGGAAGCTGCCATAACA-AAAA--CGCTCTTTGTTGC-C 756
||||| |||| ||| || ||||| || |||| ||| | |||| |||||||||||| |
Sbjct 403 ATGAAACTCCCAGTTGTGTTGAGGCAGTTGCCTTAAGAGAAAAGGTGCTCTTTGTTGCGC 462
Query 757 AATC-TCCGTGACTCC--ATTCAGATATCAGATATCATCAATTTCTTCAAAGATGTTGGA 813
||| | | | | || | | | |||||| ||||||||||||||||||||||||||||
Sbjct 463 -ATCTTTC-T--CGCCAAACTAAAATATCACATATCATCAATTTCTTCAAAGATGTTGGC 518
Query 814 GAAGTTGTTCATGTTCGACTTATTGTAAAC-AGCCAGGGAAAGCATGCGGGCTGGGGTTT 872
||||||||||||| |||||||||||| || | |||| |||||||| ||| || ||
Sbjct 519 CAAGTTGTTCATGTCCGACTTATTGTAGACCAAA-AGGGCAAGCATGCTGGCCATGGCTT 577
Query 873 TGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAGGCGCTGGTAAAGAAC---GGTGAATA 929
|||||||||| |||||||| |||||||| |||||||||||| |||||| || |||||
Sbjct 578 TGTTGAGTTTACTTCTGCTGACGAAGCAAAGAAGGCGCTGGAAAAGAAGAATGGAGAATA 637
Query 930 TTTGCACAATTACAAGATTTCTCTTGA--CGGAGCTAAGACAGCTCCACACCGTCCACCC 987
||| ||| || | |||||| |||||| ||| ||||||||||||| |||||||||
Sbjct 638 TTTACACGATCGCGAGATTTATCTTGATTCGGT--TAAGACAGCTCCATACCGTCCAC-- 693
Query 988 AAGTTTTGCCTAGATCACAAGGTTTGGTACGAAGACTACCTTCGAAGAGAGAGCCTTCTC 1047
| ||| || | | | ||||||||||||||||| |||| |||| |||
Sbjct 694 --G----GCC-----CA-A-G-T-----ACGAAGACTACCTTCGACGAGAAAGCCGTCTG 734
Query 1048 ATTAAA-GAAGTTGAGGGAGTGGAAGGACTTGATGA--AA-CTCCTGATTTTCTTGAGGA 1103
|| | | |||| ||||| |||||||||||||||||| || |||| || ||| |||||||
Sbjct 735 AT-AGATGAAGATGAGGCAGTGGAAGGACTTGATGATGAAACTCCCGAGTTTGTTGAGGA 793
Query 1104 AGTTGCTGCAAGAAAAAATACAGTTTTTG-TCGCCAATCTCCCTTACAACTGTCGTCTAA 1162
|||||| | |||||| || || | |||| | ||||||||| ||| ||| | | ||
Sbjct 794 AGTTGCCGTAAGAAAGAAGAC-GCTTTTCATTGCCAATCTCTCTTTCAAAA--C-TAAAA 849
Query 1163 TAGTACCA-ACTATCATCAATTTCTTCAGTGATGTTGGAGAAATTGTTCATATTCGAATT 1221
|| | | | | |||| |||||||||||| |||||||||||| || ||| | || || ||
Sbjct 850 TA-T-C-AGA-TATCGTCAATTTCTTCAAAGATGTTGGAGAAGTTTTTCGTGTTAGACTT 905
Query 1222 ATTGTAGACCACATGGGTGAGCCTGTGGGCTGTGGCTTTGTGGAGTTTAATTCTTCCAAC 1281
|||||| ||||||||||||||| |||||||||||||||||| || ||| |||| | |||
Sbjct 906 ATTGTAAACCACATGGGTGAGCATGTGGGCTGTGGCTTTGTTGAATTTTCTTCTGCTAAC 965
Query 1282 GAAGCAGAGAAGGCGCTGCAAAAGAAGACTGGT 1314
|||||| ||||||||||||||||||||| ||||
Sbjct 966 GAAGCAAAGAAGGCGCTGCAAAAGAAGAATGGT 998
Score = 180 bits (97), Expect = 3e-44
Identities = 242/308 (79%), Gaps = 25/308 (8%)
Strand=Plus/Plus
Query 701 ATGAATCTCCTG-GTTTTGCTGAGGAAGCTGCCATAA-CAA-AA-ACGCTCTTT-GTTGC 755
||||| |||| | | |||| |||||||| |||| ||| || || ||||| ||| ||||
Sbjct 769 ATGAAACTCCCGAG-TTTGTTGAGGAAGTTGCCGTAAGAAAGAAGACGCT-TTTCATTGC 826
Query 756 CAATCTC-CGTGACTCCATTCAGATATCAGATATCATCAATTTCTTCAAAGATGTTGGAG 814
||||||| | | | | | | |||||||||||| ||||||||||||||||||||||||
Sbjct 827 CAATCTCTC-TTTCAAAACTAAAATATCAGATATCGTCAATTTCTTCAAAGATGTTGGAG 885
Query 815 AAGTTGTTCATGTTCGACTTATTGTAAAC-AGCCA-GGGAAAGCATGCGGGCTGGGGTTT 872
||||| ||| |||| |||||||||||||| | | | ||| |||||| |||||| || ||
Sbjct 886 AAGTTTTTCGTGTTAGACTTATTGTAAACCA-C-ATGGGTGAGCATGTGGGCTGTGGCTT 943
Query 873 TGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAGGCGCTGGTAAAGAAC---GGTGAATA 929
|||||| ||| ||||||||||||||||| ||||||||||| |||||| |||||| |
Sbjct 944 TGTTGAATTTTCTTCTGCTAACGAAGCAAAGAAGGCGCTGCAAAAGAAGAATGGTGAAAA 1003
Query 930 TTTGCACAATTACA--AGATTTCTCTTGACGGAG-CTAAGACAGCTCCACACCGTC-C-- 983
|||| | || | | |||| |||||||| || || ||| ||||||| ||| || |
Sbjct 1004 ATTGCGCT-TT-CGGTATATTTTTCTTGACG-AGGCTGAGATAGCTCCATACCCTCTCCG 1060
Query 984 ACCCAAGT 991
||||||||
Sbjct 1061 ACCCAAGT 1068
Score = 158 bits (85), Expect = 1e-37
Identities = 167/204 (82%), Gaps = 15/204 (7%)
Strand=Plus/Plus
Query 242 TCGATTTCTTCAGTGATGTTGGAGAAGTTGTTAATGTTCGAATT-T-GCTTAAGCCAC-A 298
|||||||||||| |||||||||||||||||||| ||||||| || | | | || || | |
Sbjct 55 TCGATTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTG-TAAACCC-CGA 112
Query 299 CGGG-AAGC-TGTTGCGTTCTGGCTTTGTTGAGTTTTCTTCTGCTAG-TGAGGCAAACAA 355
||| |||| ||| | | | |||||||||||||||| ||||| || | | || ||||||
Sbjct 113 -GGGTAAGCATGTGG-GCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCTTAG-CAAACAT 169
Query 356 GGCACTGGAAAAGAAGAATGGTGAATATTTGCACGATCA-AGAGATTTCTCTTAAAGTTG 414
||| ||||||||||||||||||||||||||||||||||| | |||||| |||| || |
Sbjct 170 GGCGCTGGAAAAGAAGAATGGTGAATATTTGCACGATCATA-AGATTTTTCTTGGTGTGG 228
Query 415 CTCAGACAAG-TCCATACCGTCCA 437
|| ||||| | |||| ||| ||||
Sbjct 229 CTAAGACA-GCTCCAGACCCTCCA 251
> Ahg355983 jgi|Araly1|355983|fgenesh1_pg.C_scaffold_7003156
Length=1659
Score = 322 bits (174), Expect = 5e-87
Identities = 377/472 (80%), Gaps = 26/472 (6%)
Strand=Plus/Plus
Query 450 GACACCTCCTGATT-TTGTTGACG-AAGTAGTCATTGTTTCCAATCTCTCTCCCCTA-AC 506
|||| |||| |||| || |||| | ||||| || || || ||||||||||||||| | ||
Sbjct 553 GACA-CTCCCGATTCTT-TTGA-GAAAGTACTCTTTCTTGCCAATCTCTCTCCCC-AGAC 608
Query 507 TAAAATAGCACATATCAAAGGTTTCTTC-AATGGTGTTGCACAAGTTGTTAGCGTTCGAC 565
|||||| || ||||||||||||| ||| ||| | ||| ||||||||| ||||| |
Sbjct 609 TAAAATCTCAGATATCAAAGGTTTATTCAAAT-ATTTTG---GAGTTGTTAGTGTTCGTC 664
Query 566 TTGTTGTAAACCACGAGGGTAAGCATGTGGGCTATGGATTTGTTGAGTTTGCTTCTGCTT 625
|| | |||||| || ||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 665 TTATCGTAAACAACAAGGGTAAGCATCTGGGCTATGCCTTTGTTGAGTTTGCTTCTGCTT 724
Query 626 ACGGAGCAAACAAGGCTCTGGAAGAGAAAAATGGTGAATATCTGCACAATCATAAGA-TT 684
|| | ||||||||||| ||| || |||| || || |||||| |||| ||| | ||| ||
Sbjct 725 ACCGCGCAAACAAGGCACTGAAAAAGAAGAACGGCGAATATTTGCATGATCGTCAGATTT 784
Query 685 CTGTTGATGAAAGGAC---ATGAATCTCCTGGTTTTGCTGAGGAAGCTGCCATAAC--AA 739
| |||||||||| || ||||| |||| | || || ||||| | ||||||| | ||
Sbjct 785 AT-TTGATGAAAGAACATGATGAAACTCCAGATTATGTTGAGGCGGTTGCCATAGCGAAA 843
Query 740 AA-ACGCTCTTTGTTGCCAATCTCCGTGACTCC--ATTCAGATATCAGATATCATCAATT 796
|| || ||||||||| || ||| | | | || | | | |||||||||||||||||||
Sbjct 844 AAGACACTCTTTGTTTCCGGTCT-C-TCTCCCCAAACTGATATATCAGATATCATCAATT 901
Query 797 TCTTCAAAGATGTTGGAGAAGTTGTTCATGTTCGACTTA-TTGTAAACAGCCAGGGAAAG 855
||||||||||||| |||||||| |||||||||| ||||| || |||||| | | || | |
Sbjct 902 TCTTCAAAGATGTCGGAGAAGTCGTTCATGTTCAACTTACTT-TAAACAACAAAGGCAGG 960
Query 856 CATGCGGGCTGGGGTTTTGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAGG 907
|||| ||||| || ||||||||||||||||||||| |||||| ||||||||
Sbjct 961 CATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTGCTGACGAAGAAGAGAAGG 1012
Score = 215 bits (116), Expect = 8e-55
Identities = 294/375 (78%), Gaps = 32/375 (9%)
Strand=Plus/Plus
Query 692 TGAAAGGAC---ATGAATCTCCTGGTTTTGCTGAGGAAGCTGCCATAAC--AAAA-ACGC 745
||||||||| ||||| |||||| ||||| |||| | |||| |||| |||| ||||
Sbjct 1202 TGAAAGGACTTTATGAAACTCCTGATTTTGTTGAGCCATTTGCCGTAACAAAAAAGACGC 1261
Query 746 TCTTTG-TTGCCAATCTC-CGTGA-CTCCATTCAGATATCAGATATCATCAATTTCTTCA 802
|||||| || |||||||| | | | || | | | ||||||||||| |||| ||||||||
Sbjct 1262 TCTTTGCTT-CCAATCTCTC-TCACCT-AACTAAAATATCAGATATTATCAGTTTCTTCA 1318
Query 803 AAGATGTTGGAGAAGTTGTTCATGTTCGACTTATTGTAAAC-AGCCA-GGGAAAGCATGC 860
||||||||||||||||||||| |||||||||||||||| || | | | ||| |||| ||
Sbjct 1319 AAGATGTTGGAGAAGTTGTTCGTGTTCGACTTATTGTAGACCA-C-ATGGGTAAGCCTGT 1376
Query 861 GGGCTGGGGTTTTGTTGAGTTTGCTTCTGCT-AACGAAGCAGAGAAGGCGCTGGTAAAGA 919
|||||| || ||| ||||||||||||||||| || ||||||||||||||||||| |||||
Sbjct 1377 GGGCTGTGGCTTTATTGAGTTTGCTTCTGCTGAA-GAAGCAGAGAAGGCGCTGGAAAAGA 1435
Query 920 AC---GGTGAATATTTGCACAATTAC-AAGATTTCTCTTGACG-GAGCTAAGACAGCTCC 974
| |||||| ||||| | ||| ||||||| ||||||| | ||| ||| ||||||
Sbjct 1436 AGAATGGTGAACGTTTGCGCT-TTAGTAAGATTTGTCTTGACATG-GCTGAGATAGCTCC 1493
Query 975 ACACCGTC-C--ACCCAAGTTTTGCCTAG-ATCACAAGGTTTGGTACGAAGACTACCTTC 1030
| ||| || | || ||||| ||| | | | ||| ||||||| |||||| | ||||
Sbjct 1494 ATACCCTCTCCGACTCAAGTACAACCTTGCAG-AGAAGCTTTGGTATGAAGACAAACTTC 1552
Query 1031 GAAGAGAGA-GCCTT 1044
|| ||| || |||||
Sbjct 1553 GAGGAG-GAAGCCTT 1566
> Ahg891097 jgi|Araly1|891097|Al_scaffold_0007_3083
Length=1356
Score = 248 bits (134), Expect = 8e-65
Identities = 266/328 (81%), Gaps = 15/328 (5%)
Strand=Plus/Plus
Query 722 AGGAAGCTGCCATA--ACAAAA-ACGCTCTTTGTTGCCAATCT-CCGTGACTCCATTCAG 777
||||||||||| || | |||| || |||||||||| |||| | || || | | | |
Sbjct 197 AGGAAGCTGCCGTACGAAAAAAGACTCTCTTTGTTGGCAATATCCCATG-CAAGACTAAA 255
Query 778 ATATCAGATATCATCAATTTCTTCAAAGATGTTGGAGAAGTTGTTCATGTTCGACTTATT 837
||| || |||||||| ||||||||||| ||||||||||| |||||| ||||| |||||||
Sbjct 256 ATACCAAATATCATCGATTTCTTCAAAAATGTTGGAGAAATTGTTCGTGTTCAACTTATT 315
Query 838 GTAAACAGCCAGGGAAAGCATGCGGGCTGGGGTTTTGTTGAGTTTGCTTCTGCTAACGAA 897
||| | | |||| | ||||| |||||| || |||||||||||||||||||||||||||
Sbjct 316 CTAAGCCTCAAGGGTACGCATGTGGGCTGTGGCTTTGTTGAGTTTGCTTCTGCTAACGAA 375
Query 898 GCAGAGAAGGCGCTGGTAAAGAA---CGGTGAATATTTGCACAATTACAAGATT-TCTCT 953
||||||||||| |||| |||||| ||||||||||||| | || | |||||| | |||
Sbjct 376 GCAGAGAAGGCACTGGAAAAGAAGAACGGTGAATATTTGGGCGATCATAAGATTGT-TCT 434
Query 954 TGACGGA-GCTA--A-GACAGCTCCACACCGTCCACCCAAGTTTTGCCTAGATCACAAGG 1009
||| ||| |||| | | |||| | | | ||||||||||| |||| ||||||||| ||
Sbjct 435 TGA-GGAAGCTACTAAGGGAGCTAAATATCTTCCACCCAAGTATTGCTTAGATCACATGG 493
Query 1010 TTTGGTACGAAGACTACCTTCGAAGAGA 1037
||||||||||||||||||||||| ||||
Sbjct 494 TTTGGTACGAAGACTACCTTCGACGAGA 521
Score = 176 bits (95), Expect = 4e-43
Identities = 287/375 (77%), Gaps = 31/375 (8%)
Strand=Plus/Plus
Query 707 CTCCTGGTTTTGCTGAGG-A--AGCTGCCATAACAAAA-ACGCTCTTTGTTGCCAATCTC 762
|||||| || || ||||| | ||||| |||| |||| |||||||||||| || ||||
Sbjct 863 CTCCTGATTCTGTTGAGGCAGTTGCTGCAATAA-AAAAGACGCTCTTTGTTACCCATCTA 921
Query 763 CGTGACTCCATTCAG--ATATCAGATATCATCAATTTCTTCAAAGATGTTGGAGAAGTTG 820
| | | || | | |||||| |||||||||| |||||||||||||||||||||||||
Sbjct 922 TTTCA-T-CAAACTGTAATATCACATATCATCAACTTCTTCAAAGATGTTGGAGAAGTTG 979
Query 821 TTCATGTTCGACTTATTGTAAA-CAGCCAGGGAAAGCATGCGGGCTGGGGTTTTGTTGAG 879
|||||||||||||||||||||| || | |||| ||| ||| |||||| || |||||| ||
Sbjct 980 TTCATGTTCGACTTATTGTAAATCA-CAAGGGCAAGAATGTGGGCTGTGGCTTTGTTCAG 1038
Query 880 TTTGCTTCTGCTAACGAAGCAGAGAAGGCGCTG-GTAAAGAACG-GTG--AATA-TTTGC 934
||||||||| | |||||||| ||||||| ||| | |||||| | ||| || | ||| |
Sbjct 1039 TTTGCTTCTATTGACGAAGCAAAGAAGGCACTGCG-AAAGAA-GTGTGGTAAAAATTTCC 1096
Query 935 ACAATTACAAGATTTCTCTTGACG-GAGCTAAGACAGCTCCACACCGTC-C--ACCCAAG 990
| | | |||| |||||||| | ||| ||| ||||||| ||| || | ||| |||
Sbjct 1097 TTGGTCGCGATATTTTTCTTGACGTG-GCTGAGATAGCTCCATACCCTCTCCGACC-AAG 1154
Query 991 TTTTG-CCTAG-ATCACAAGGTTTGGTACGAAGACTACCTTCGA-AGAGAGAGCCTTCTC 1047
| ||| | | | ||||| ||| || ||| |||||||||| | ||| ||||||||
Sbjct 1155 GTACAACCTTGCAG-AGAAGGTCTGGAACAAAGTCTACCTTCGACA-AGAAAGCCTTCTG 1212
Query 1048 ATTA-AAGAAGTTGA 1061
|| | |||||| |||
Sbjct 1213 AT-AGAAGAAGATGA 1226
> Ahg947382 jgi|Araly1|947382|scaffold_703611.1
Length=725
Score = 228 bits (123), Expect = 1e-58
Identities = 228/275 (83%), Gaps = 22/275 (8%)
Strand=Plus/Plus
Query 722 AGGAAGCTGCCATAACAAAAACGCTCTTTGTTGCCAATCTCCGTGA-C-T-CCATTCAGA 778
|||||||||||| |||||||||||||| |||||||||||| | | | | | |||| | |
Sbjct 230 AGGAAGCTGCCACAACAAAAACGCTCTATGTTGCCAATCT-C-T-ATCGTAACATTAAAA 286
Query 779 TATCAGATATCATCAATTTCTTCAAAGATGTTGGAGAAGTTGTTCATGTTCGACTTATTG 838
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 287 TATCAGATATAATCAATTTCTTCAAAGATGTTGGGGAAGTTGTTCATGTTCGACTTATTG 346
Query 839 TAAACAGCCAGGGAAAG-CATGCGGGCTGGGGTTTTGTTGAGTTTGCTTCTGCTAACGAA 897
|||||||| |||| | ||||| ||||| | |||||||||||||||||||||||||||
Sbjct 347 TAAACAGCAAGGG-CTGTTATGCGTGCTGGTGCTTTGTTGAGTTTGCTTCTGCTAACGAA 405
Query 898 GCAGAGAAGGCGCTGGTAAAGAACGGTGAATATTTGCACAATTACAAGATTTCTCTTGAC 957
||||||||| || ||||||||||||| || || |||||||| ||||||
Sbjct 406 GCAGAGAAG--------AA----CGGTGAATATTTGGACGATCGCAAGATTTTTCTTGAA 453
Query 958 G-GAGCTAAGACAGCTCCACACCGTCCACCCAAGT 991
| | | |||||||| |||| | ||||||||||||
Sbjct 454 GCG-GTTAAGACAGTTCCATTCAGTCCACCCAAGT 487
Score = 126 bits (68), Expect = 4e-28
Identities = 104/121 (86%), Gaps = 4/121 (3%)
Strand=Plus/Plus
Query 789 CATCAATTTCTTCAAAGATGTTGGAGAAGTTGTTCATGTTCGACTTATTGTAAAC-AGCC 847
|||||| ||||| ||||| |||||||||||||||||||||||||||||||| || | |
Sbjct 576 CATCAAATTCTTTGAAGATATTGGAGAAGTTGTTCATGTTCGACTTATTGTAGACTA-C- 633
Query 848 A-GGGAAAGCATGCGGGCTGGGGTTTTGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAG 906
| ||| |||||| || ||| || |||||||||||| ||||| |||||||||||||||||
Sbjct 634 ATGGGTGAGCATGTGGACTGTGGCTTTGTTGAGTTTACTTCTTCTAACGAAGCAGAGAAG 693
Query 907 G 907
|
Sbjct 694 G 694
> Ahg891584 jgi|Araly1|891584|Al_scaffold_0007_3570
Length=1284
Score = 130 bits (70), Expect = 3e-29
Identities = 148/183 (81%), Gaps = 15/183 (8%)
Strand=Plus/Plus
Query 220 CAAACAAAAAT-TTCAGATATCATCGATTTCTTCAGTGATGTTGGAGAAGTTGTTAATGT 278
||||| || || || ||||||| ||||||||| || ||||||||||||||||| | ||
Sbjct 397 CAAACTAAGATATT-AGATATCTTCGATTTCTGCAAAGATGTTGGAGAAGTTGTCAGTGC 455
Query 279 TCGA-AT-TTGCTTAAGCCA-CACGGG-AAGC-TGTTGCGTTCTGGCTTTGTTGAGTTTT 333
|||| | |||| || ||| | ||| |||| || || | | || |||||||||| |||
Sbjct 456 TCGACTTATTGC--AAACCATGA-GGGCAAGCATG-TGGGCTGTGCCTTTGTTGAG-TTT 510
Query 334 C-TTCTGCTAGT-GAGGCAAACAAGGCACTGGAAAAGAAGAATGGTGAATATTTGCACGA 391
| |||||||| | || ||||| ||||| |||||||||||||||||||||||||||||| |
Sbjct 511 CTTTCTGCTA-TCGAAGCAAATAAGGCGCTGGAAAAGAAGAATGGTGAATATTTGCACAA 569
Query 392 TCA 394
|||
Sbjct 570 TCA 572
Score = 67.6 bits (36), Expect = 3e-10
Identities = 58/68 (85%), Gaps = 4/68 (6%)
Strand=Plus/Plus
Query 355 AGGCACTGGAAAAGAAGAATGGTGAATATTTGCACGATC--AAGAGATTTCTCTTAAAGT 412
||||||||||||||||||||||||||||||||| | ||| |||| | ||||| || ||
Sbjct 221 AGGCACTGGAAAAGAAGAATGGTGAATATTTGCTCCATCGCAAGATAATTCTC--AATGT 278
Query 413 TGCTCAGA 420
|||| |||
Sbjct 279 TGCTAAGA 286
> Ahg937636 jgi|Araly1|937636|scaffold_501827.1
Length=377
Score = 128 bits (69), Expect = 1e-28
Identities = 142/176 (81%), Gaps = 9/176 (5%)
Strand=Plus/Plus
Query 736 ACAAAA-ACGCTCTTTGTTGCCAATCTCCGTGACTCCAT--TCAGATATCAGATATCATC 792
|||||| ||||||| |||| || ||| | | | |||| | | |||||||||||||||
Sbjct 135 ACAAAACACGCTCTATGTTACCTGTCT-C-TCTCCCCATACTAAAATATCAGATATCATC 192
Query 793 AATTTCTTCAAAGATGTTGGAGAAGTTGTTCA-TGTTCGACTTATTGT-AAACAGCCAGG 850
|||||||||||||||||||| |||||||| | ||||| ||||| | | |||| || |||
Sbjct 193 GATTTCTTCAAAGATGTTGGACAAGTTGTT-AGTGTTCAACTTACTATAAAAC-GCGAGG 250
Query 851 GAAAGCATGCGGGCTGGGGTTTTGTTGAGTTTGCTTCTGCTAACGAAGCAGAGAAG 906
| |||| | | | | || |||||||||||||||||||||||||||||| |||||
Sbjct 251 GTAAGCGTTTGTCCAGTGGCTTTGTTGAGTTTGCTTCTGCTAACGAAGCAAAGAAG 306
> Ahg897736 jgi|Araly1|897736|Al_scaffold_0005_1702
Length=1833
Score = 119 bits (64), Expect = 7e-26
Identities = 111/133 (83%), Gaps = 6/133 (5%)
Strand=Plus/Plus
Query 778 ATATCAGATATCATCAATTTCTTCAAAGATGTTGGAGAAGTTGTTCA-TGTTCGACTT-A 835
|||||| ||||||||||||||||||||||||||||| |||||||| | ||||| |||| |
Sbjct 1654 ATATCAAATATCATCAATTTCTTCAAAGATGTTGGACAAGTTGTT-AGTGTTCAACTTGA 1712
Query 836 TTGTAAA-CAGCCAGGGAAAGCATGCGGGCTGGGGTTTTGTTGAGTTTGCTTCTGCTAAC 894
|| |||| | || | || |||| | | | | || |||||||||||||||||||| |||
Sbjct 1713 TT-TAAAAC-GCGACGGTAAGCGTTTGTCCAGTGGCTTTGTTGAGTTTGCTTCTGCCAAC 1770
Query 895 GAAGCAGAGAAGG 907
|||||| ||||||
Sbjct 1771 GAAGCAAAGAAGG 1783
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55916479660
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5