BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G49980.1 Length=2734 Score E Sequences producing significant alignments: (Bits) Value Ahg914105 jgi|Araly1|914105|Al_scaffold_0001_4359 2547 0.0 Ahg356151 jgi|Araly1|356151|fgenesh1_pg.C_scaffold_7003324 1413 0.0 Ahg914106 jgi|Araly1|914106|Al_scaffold_0001_4360 815 0.0 > Ahg914105 jgi|Araly1|914105|Al_scaffold_0001_4359 Length=1911 Score = 2547 bits (1379), Expect = 0.0 Identities = 1531/1603 (96%), Gaps = 15/1603 (1%) Strand=Plus/Plus Query 56 ATGGATAATGGCGAATCATCATCCACCAACAATTCGTCGCGTCCATGGGAATCCTACAAT 115 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGATAATGGCGAATCATCATCCACCAACAATTCGTCGCGTCCATGGGAATCCTACAAC 60 Query 116 ACCGTCTTCACTAACGCGAAAGCCGGTATGGAGGGAGTTGACAAAGAGAAAGTCCAGAGG 175 ||| ||||||| ||||| |||||||| |||||||||||||| || || |||||||||||| Sbjct 61 ACCTTCTTCACGAACGCCAAAGCCGGAATGGAGGGAGTTGATAAGGAAAAAGTCCAGAGG 120 Query 176 GTTGTCTATGAAATGAGTAAAGGATCCAAGTATTTTCAAAATGAGGAGCGTAAAGAAGCT 235 |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct 121 ATTGTCTATGAAATGAGTAAAGGATCCAAGTTTTTTCAAAATGAGGAACGTAAAGAAGCT 180 Query 236 CTTATGAAACAAAAGATTGAGCATATGCGTGATCGATGCGCAAAGCTTTCATCCCT-TGA 294 ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| | | Sbjct 181 CTTATGAAACAAAAGATTGAGCATATGCGTGATAGATGCGCAAAGCTTTCGT-CCTCTAA 239 Query 295 TTTATCTAATTATCAGAAGGTGGTTGATAAAAGGATCTTAGAGTTAGAAGCTACACGTGA 354 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 TTTATCTAATTATCACAAGGTGGTTGATAAAAGGATCTTAGAGTTAGAAGCTACACGTGA 299 Query 355 CCTATCCAGAATTTGGCTTCATGTTGATATGGATGCTTTTTATGCTGCTGTTGAAACTTT 414 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 300 CCTATCCAGAATTTGGCTGCATGTTGATATGGATGCTTTTTATGCTGCTGTTGAAACTTT 359 Query 415 GAGCGATCCTTCGATCAAGGGCAAGCCAATGGCTGTTGGAGGCTTATCCATGATCTCCAC 474 |||||||||||| ||||||||||||| |||||||||||||| || |||||||||||||| Sbjct 360 GAGCGATCCTTCTCTCAAGGGCAAGCCGATGGCTGTTGGAGGATTGTCCATGATCTCCAC 419 Query 475 TGCTAATTATGAGGCAAGGAAGTTTGGGGTCCGTGCTGCAATGCCTGGCTTCATTGCTCG 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 TGCTAATTATGAGGCAAGGAAGTTTGGGGTCCGTGCTGCAATGCCTGGCTTCATTGCTCG 479 Query 535 TAAATTGTGTCCAGATTTGATATTTGTTCCTGTTGATTTCACTAAGTATACTCACTACAG 594 |||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 480 TAAACTATGTCCAGATTTGATATTTGTTCCTGTAGATTTCACTAAGTATACTCACTACAG 539 Query 595 TGACTTAACCAGAAAGGTTTTTAGGAACTATGATCCTCACTTCATTGCTGGGAGCTTGGA 654 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 TGACTTAACAAGAAAGGTTTTTAGGAACTATGATCCTCACTTCATTGCTGGGAGCTTGGA 599 Query 655 TGAAGCCTACCTTGACATAACTGAGGTTTGTCGAGAAAGAGGTCTTTCAGGTGGAGAAAT 714 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 TGAAGCCTACCTTGACATAACTGAGGTTTGTCGAGAAAGAGGTCTTTCAGGTGGAGAAAT 659 Query 715 TGCAGAGGAGCTTAGATCTTCTGTTTATTCCGAGACTGGACTGACATGCAGTGCTGGAGT 774 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 TGCAGAGGAGCTTAGATCTTCTGTTTATTCCGAGACTGGACTGACATGCAGTGCTGGAGT 719 Query 775 AGCGGCAAACCGCTTGCTAGCCAAGGTTTGCTCAGACATTAACAAGCCTAATGGACAGTT 834 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 AGCGGCAAACCGCTTACTAGCCAAGGTTTGCTCAGACATTAACAAGCCTAATGGACAGTT 779 Query 835 TGTTCTACAAAATGACCGATCAACTGTCATGACATTCGTATCTTTCCTCCCTGTAAGAAA 894 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 780 TGTTCTACAAAATGACCGATCAACTGTCATGACATTTGTATCTTCCCTCCCTGTAAGAAA 839 Query 895 GATCGGTGGAATTGGTAAGGTTACTGAACATATTTTAAAGGATGCTTTGGGAATTAAAAC 954 |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 840 GATCGGTGGAATTGGTAAGGTTACTGAACATATTCTAAAAGATGCTTTGGGAATTAAAAC 899 Query 955 ATGTGAGGAGATGGTGCAGAAGGGAtctcttctctacgctctcttctctcAGTCATCAGC 1014 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 900 ATGCGAGGAGATGGTGCAGAAGGGATCTCTTCTCTACGCTCTCTTCTCTCAGTCGTCAGC 959 Query 1015 AGACttttttttGTCGGTTGGACTGGGGCTTGGAGGAACAAACACCCCTCAGGTTAGGTC 1074 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 960 AGACTTTTTTTTGTCGGTTGGACTGGGGCTTGGAGGAACAGACACCCCTCAGGTTAGGTC 1019 Query 1075 TCGTAAAAGTATTAGCAGTGAGAGGACATTTGCTGCGACAGGAGATGAAAGATTGCTATA 1134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1020 TCGTAAAAGTATTAGCAGTGAGAGGACATTTGCTGCGACAGGAGATGAAAGATTGCTATA 1079 Query 1135 TTCCAAGTTGGATGAACTTGCAGAAATGCTATCTCATGACATGAAAAAGGAGGGCCTAAC 1194 ||| ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1080 TTCGAAGTTGGCTGAAATTGCAGAAATGCTATCTCATGACATGAAAAAGGAGGGTCTAAC 1139 Query 1195 AGCAAGAACGTTGACACTTAAACTGAAAACTGCCTCCTTTGAGATCAGGAGCAGAGCTGT 1254 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1140 AGCAAGGACGTTGACACTTAAACTGAAAACTGCCTCCTTTGAGATCAGGAGCAGAGCTGT 1199 Query 1255 TAGCCTGCAGAGGTACACGTGTTCAAGCGATGATATACTAAAGCATGCTACAAAGCTGTT 1314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1200 TAGCCTGCAGAGGTACACGTGTTCAAGCGATGATATACTAAAGCATGCTACAAAGCTGTT 1259 Query 1315 GAAGGCAGAACTTCCTGTTTCCGTAAGGTTGATAGGTTTGCGCATGTCGCAGTTCGTTGA 1374 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1260 GAAGGCGGAACTTCCTGTTTCCGTAAGGTTGATAGGTTTGCGCATGTCGCAGTTCGTTGG 1319 Query 1375 AGAAATCCGCAATTCTGATCCTTCACAGGGAACTATTACTAAGTTCATCGTTCAAAAGGA 1434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320 AGAAATCCGCAATTCTGATCCTTCACAGGGAACTATTACTAAGTTCATCGTTCAAAAGGA 1379 Query 1435 TTCCTCAAGACAAGCACAAGATCTGGATGACAATGACTCATTTGACTTGGATGCTAATAA 1494 ||| |||||||||| | ||||||||| ||||||||||||||||| ||||||| ||| Sbjct 1380 TTCTTCAAGACAAG-A-----TCTGGATGATAATGACTCATTTGACTTAGATGCTAGTAA 1433 Query 1495 AAATTGCTTAAGCAATGACGAGAGCGGGAATGTATCCTTTGGTTCTCATGAGACAAGCTC 1554 |||||||||||| ||||||| ||| | ||||||||||||| ||||||||||||| Sbjct 1434 AAATTGCTTAAGTAATGACGTGAGT-----T-TATCCTTTGGTTCCCATGAGACAAGCTA 1487 Query 1555 TGCCCATCTGAAGGATGTTGTCGAATATGAAGAACGGTCCCAAATAGATTCCGGAAAGGT 1614 ||||||||||||||||||||| |||||||||||||| || ||||||||||| | |||||| Sbjct 1488 TGCCCATCTGAAGGATGTTGTTGAATATGAAGAACGATCACAAATAGATTCTGAAAAGGT 1547 Query 1615 AATTCCAAATCAAGAGTGTATGAAAAAAGAAGAAAGGCTGCAA 1657 ||||||||||||||| ||| ||||||| |||||||||| |||| Sbjct 1548 AATTCCAAATCAAGAATGTGTGAAAAA-GAAGAAAGGCCGCAA 1589 Score = 468 bits (253), Expect = 1e-130 Identities = 303/326 (93%), Gaps = 7/326 (2%) Strand=Plus/Plus Query 1749 CAGTTTCAGTATTTCCACAAACGGAGCCGTTATATTGGATTGACGGCTACAAATGCGTCT 1808 |||||||||||||||| ||||||| ||| ||||||||| |||| |||||||||||||||| Sbjct 1590 CAGTTTCAGTATTTCCGCAAACGG-GCCATTATATTGGGTTGATGGCTACAAATGCGTCT 1648 Query 1809 TGTGTGGGATAGAGTTACCACCATCTTTTGTAGAGGAACGACAAGAACAC-TC-TGATTT 1866 ||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||| Sbjct 1649 TGTGTGGGATAGAGTTACCACCATCTTTTGTTGAGGAACGACAAGAACACCTCCTGATTT 1708 Query 1867 TCATCTCGCTCAGAGACTTCAAAACGAAGAAACTGGCTCTAGTTCTTCCACAACACCTTC 1926 |||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 1709 TCATCTTGCTCAGAGACTTCAAAACGAAGAATCTGGATCTAGTTCTTCCACAACACCTTC 1768 Query 1927 AAAACGAAGGATTCT-CGGAAAGGAAAAGGTAAATTCGAAGCCAAAGAAGCAGAAACCAG 1985 |||||||||| | | | || || ||||||||||||| |||| ||||||||||||||||| Sbjct 1769 AAAACGAAGG-T-CAGCTGACAG-AAAAGGTAAATTCCAAGCGAAAGAAGCAGAAACCAG 1825 Query 1986 ATCAAAAGGACAGTAGCAAACACATCCCAATACACGCATTCTTCACAAAAAGCAATCAAA 2045 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 1826 ATCAAAAGGACAGTAGCAAACACATCCCAATACACACATTCTTCACAAAGAGCAATCAAA 1885 Query 2046 ACTCTAACGAAACCCAGAGGAAATGA 2071 |||| ||||||||||||||||||||| Sbjct 1886 ACTCGAACGAAACCCAGAGGAAATGA 1911 > Ahg356151 jgi|Araly1|356151|fgenesh1_pg.C_scaffold_7003324 Length=1779 Score = 1413 bits (765), Expect = 0.0 Identities = 970/1065 (91%), Gaps = 29/1065 (3%) Strand=Plus/Plus Query 1587 AACGGTCCCAAATAGATTCCGGAAAGGTAATTCCAAATCAAGAGTGTATGAAAAAAGAAG 1646 |||| |||||||||||||| | ||||||||||||||||||||| ||| || | ||||||| Sbjct 737 AACGATCCCAAATAGATTCTGAAAAGGTAATTCCAAATCAAGAATGTGTGGAGAAAGAAG 796 Query 1647 AAAGGCTGCAAATATTGGAAGGAGATTCACTGCTCAAAAAATACAAGGAGTGCAAACCAG 1706 |||||| |||| |||||||||||||| | |||||||||||| |||||||||||||||||| Sbjct 797 AAAGGCCGCAAGTATTGGAAGGAGATGCTCTGCTCAAAAAACACAAGGAGTGCAAACCAG 856 Query 1707 ATACTAGTCACTCGATGAATGATAATTCTAATG--C---A-ACCGAAGCAGTTTCAGTAT 1760 |||| | ||||| ||||||||||| || ||||| | | ||||||||||||||||||| Sbjct 857 ATACGAATCACTTGATGAATGATAGTTATAATGTACAAAACACCGAAGCAGTTTCAGTAT 916 Query 1761 TTCCACAAACGGAGCCGTTATATTGGATTGACGGCTACAAATGCGTCTTGTGTGGGATAG 1820 |||| ||||||||||| ||||||||| |||| || ||||||||||||||||||||||| | Sbjct 917 TTCCGCAAACGGAGCCATTATATTGGGTTGATGGGTACAAATGCGTCTTGTGTGGGATCG 976 Query 1821 AGTTACCACCATCTTTTGTAGAGGAACGACAAGAACACTCTGATTTTCATCTCGCTCAGA 1880 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 977 AGTTACCACCATCTTTTGTAGAGGAACGACAAGAACACTCTGATTTTCATCTCGCTCAGA 1036 Query 1881 GACTTCAAAACGAAGAAACTGGCTCTAGTTCTTCCACAACACCTTCAAAACGAAGGATTC 1940 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 1037 GACTTCAAAACGAAGAATCTGGCTCGAGTTCTTCCACAACACCTTCAAAACGAAGGATTC 1096 Query 1941 TCGGAAAGGAAAAGGTAAATTCGAAGCCAAAGAAGCAGAAACCAGATCAAAAGGACAGTA 2000 |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 1097 TCGGAAAGGAAAAGGTAAATTCCAAACCAAAGAAGCAGAAACCAGATCAAAAGGACAGTA 1156 Query 2001 GCAAACACATCCCAATACACGCATTCTTCACAAAAAGCAATCAAAACTCTAACGAAACCC 2060 || || ||| | | | | | |||||||||||||| |||||||| | Sbjct 1157 GC-AA-ACA---C-A-A-A-G--------------AGCAATCAAAACTCGAACGAAACTC 1193 Query 2061 AGAGGAAATGAAGATGGCTCTGAGCCCACCGAAACTCATTCTCTCACCGTCCAATTCCCT 2120 ||| ||||||||||||||||||| ||| | ||||||| ||||||||||||||||||||| Sbjct 1194 AGAAGAAATGAAGATGGCTCTGATTCCAGCTAAACTCAATCTCTCACCGTCCAATTCCCT 1253 Query 2121 CGGCGATTCCAATTCCCTACCGTCGATGTCAGACATCCTGACGTCATCAAAAGCTCGAAA 2180 || || |||| || ||||||||||||||||||||||||| ||||||| ||||||||| Sbjct 1254 GGGTGAACCCAAATCATTACCGTCGATGTCAGACATCCTGACATCATCAAGAGCTCGAAA 1313 Query 2181 GCTAGACTTAAAGATCCAGACTTTAGGACCGTTTTTCAGAGTGACAGGGAAGAACGCAGA 2240 | |||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||| Sbjct 1314 GATAGACTTAAAGATCCAAACTTTAGGACCGTTTTTCAGAGTGACGGGGAAGAACTTAGA 1373 Query 2241 CACGGGCGGTGAGGTGGGAAGAGCAGAGGGAGTGGTGCGTCCATGGTTCGGACGCGGTTT 2300 || ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 1374 AACAGGCAGTGAGGTGGGAAGAGCAGAGGGAGTGGTGCGTCCATGGTTCGGACACGGCTT 1433 Query 2301 GGTTCTGCATTTGGATACGATAAGACTGACGAAAGAGACAGTGGCTATGGATAAGTCTGT 2360 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 1434 GGTTCTGCATTTGGATACGATAAGACTGACGAAAGAGACGGTGGCTATGGATAAATCTGT 1493 Query 2361 TCTTGGAGTTGGTTTATACGTCGGAGCTGTAGCGATTCGCCATGGCTACGACTGTGGTTG 2420 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1494 TCTTGGAGTTGGTTTATACGTCGGAGCTGTAGCTATTCGCCATGGCTACGACTGTGGTTG 1553 Query 2421 CCGTACTGCTCAGCTTCTTGCTATCTACGACTCCGATCTCTACCATTCCAAGCTGGTTAG 2480 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1554 CCGCACTGCTCAGCTTCTCGCTATCTACGACTCCGATCTCTACCATTCCAAGCTGGTTAG 1613 Query 2481 GTTTTACAGAAGAATTGGGTTCGAAGAGGTGAATGAAGTGAGTGGGTCGTCAATTGGAGA 2540 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 1614 GTTTTACAGAAGAATTGGGTTCGAAGAGGTGAAAGAAGTGAGTGGGTCGTCGATTGGAGA 1673 Query 2541 CATGGCTGACATGTTAGTGTGGGGCGGAGTTGGTACTCGCATGGATGCTAATATCCATCA 2600 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1674 CATGGCTGACATGTTAATGTGGGGTGGAGTTGGTACTCGCATGGATGCTAATATACATCA 1733 Query 2601 TCTTCTTTTTAAATGGTCCAAAGTTTTCCTCAAATCACATTCTTA 2645 ||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct 1734 TCTCCTTCTTAAATGGTCCAAAGTTTTCCTCAAATCACATTCTTA 1778 Score = 499 bits (270), Expect = 4e-140 Identities = 321/345 (93%), Gaps = 6/345 (2%) Strand=Plus/Plus Query 1147 TGAACTTGCAGAAATGCTATCTCATGACATGAAAAAGGAGGGCCTAACAGCAAGAACGTT 1206 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 399 TGAAATTGCAGAAATGCTATCTCATGACATGAAAAAGGAGGGTCTAACAGCAAGGACGTT 458 Query 1207 GACACTTAAACTGAAAACTGCCTCCTTTGAGATCAGGAGCAGAGCTGTTAGCCTGCAGAG 1266 || |||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 459 GATACTTCAACTGAAAACTACCTCCTTTGAGATCAGAAGCAGAGCTGTTAGCCTGCAGAG 518 Query 1267 GTACACGTGTTCAAGCGATGATATACTAAAGCATGCTACAAAGCTGTTGAAGGCAGAACT 1326 ||||||||||||||| ||||||||||||||||||| | |||||||||||||||| ||||| Sbjct 519 GTACACGTGTTCAAGTGATGATATACTAAAGCATGGTGCAAAGCTGTTGAAGGCGGAACT 578 Query 1327 TCCTGTTTCCGTAAGGTTGATAGGTTTGCGCATGTCGCAGTTCGTTGAAGAAATCCGCAA 1386 ||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 579 TCCTGTTTCCGTATTGTTGATAGGTTTGCGCATGTCGCAGTTTGTTGGAGAAATCCGCAA 638 Query 1387 TTCTGATCCTTCACAGGGAACTATTACTAAGTTCATCGTTCAAAAGGATTCCTCAAGACA 1446 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 639 TTCTGATCCTTCACAGGGAACTATTACTAAGTTCATCGTTCAAAAGGATTCTTCAAGACA 698 Query 1447 AGCACAAGATCTGGATGACAATGACTCATTTGACTTGGATGCTAA 1491 || | ||||||||| ||||||||||||||||| |||||||| Sbjct 699 AG-A-----TCTGGATGATAATGACTCATTTGACTTAGATGCTAA 737 > Ahg914106 jgi|Araly1|914106|Al_scaffold_0001_4360 Length=501 Score = 815 bits (441), Expect = 0.0 Identities = 481/501 (96%), Gaps = 0/501 (0%) Strand=Plus/Plus Query 2146 ATGTCAGACATCCTGACGTCATCAAAAGCTCGAAAGCTAGACTTAAAGATCCAGACTTTA 2205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGTCAGACATCCTGACGTCATCAAAAGCTCGAAAGCTAGACTTAAAGATCCAGACTTTA 60 Query 2206 GGACCGTTTTTCAGAGTGACAGGGAAGAACGCAGACACGGGCGGTGAGGTGGGAAGAGCA 2265 |||||||||||||||||||| |||||||||||||| || ||||||||||| ||| ||||| Sbjct 61 GGACCGTTTTTCAGAGTGACGGGGAAGAACGCAGATACAGGCGGTGAGGTAGGACGAGCA 120 Query 2266 GAGGGAGTGGTGCGTCCATGGTTCGGACGCGGTTTGGTTCTGCATTTGGATACGATAAGA 2325 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 121 GAGGGAGTGGTGCGGCCATGGTTCGGACGCGGCTTGGTTCTGCATTTGGATACGATAAGA 180 Query 2326 CTGACGAAAGAGACAGTGGCTATGGATAAGTCTGTTCTTGGAGTTGGTTTATACGTCGGA 2385 |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 181 CTGACGAAAGAGACGGTGGCAATGGATAAGTCTGTTCTTGGAGTTGGTTTATACGTCGGA 240 Query 2386 GCTGTAGCGATTCGCCATGGCTACGACTGTGGTTGCCGTACTGCTCAGCTTCTTGCTATC 2445 |||||||| ||||| ||||||||||||||||||||||| |||||||| ||||| |||||| Sbjct 241 GCTGTAGCTATTCGTCATGGCTACGACTGTGGTTGCCGCACTGCTCAACTTCTCGCTATC 300 Query 2446 TACGACTCCGATCTCTACCATTCCAAGCTGGTTAGGTTTTACAGAAGAATTGGGTTCGAA 2505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TACGACTCCGATCTCTACCATTCCAAGCTGGTTAGGTTTTACAGAAGAATTGGGTTCGAA 360 Query 2506 GAGGTGAATGAAGTGAGTGGGTCGTCAATTGGAGACATGGCTGACATGTTAGTGTGGGGC 2565 |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 361 GAGGTGAAAGAAGTGAGTGGGTCGTCGATTGGAGACATGGCTGACATGTTAGTGTGGGGT 420 Query 2566 GGAGTTGGTACTCGCATGGATGCTAATATCCATCATCTTCTTTTTAAATGGTCCAAAGTT 2625 |||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| Sbjct 421 GGAGTTGGTACTCGCATGGATGCTAATATCCATCATCTCCTTCTTAAATGGTACAAAGTT 480 Query 2626 TTCCTCAAATCACATTCTTAA 2646 ||||||||||||||||||||| Sbjct 481 TTCCTCAAATCACATTCTTAA 501 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 103148383460 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5