BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G50250.1 Length=2473 Score E Sequences producing significant alignments: (Bits) Value Ahg923463 jgi|Araly1|923463|scaffold_104744.1 3572 0.0 Ahg494803 jgi|Araly1|494803|fgenesh2_kg.8__619__AT5G42270.1 1786 0.0 > Ahg923463 jgi|Araly1|923463|scaffold_104744.1 Length=2267 Score = 3572 bits (1934), Expect = 0.0 Identities = 2163/2271 (95%), Gaps = 26/2271 (1%) Strand=Plus/Plus Query 108 GAAGAAGAAGAAACAGAGCTGCTTCAAT----G-----GCTTCTAACTCATTACTACGTT 158 |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 4 GAAGAAGAAGAAACAGAGCTGCTTCAATGGCGGCCACAGCTTCTAACTCATTACTACG-- 61 Query 159 CTTCTTCAAATTTCTTCTTAGGATCCCATATCATAATCTCATCTCCCACCCCTAAAACCA 218 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 62 -TTCTTCAAA--T-TTCTTAGGATCCCATATCATAATCTCATCTCCCACCCCTAAAACCA 117 Query 219 CCAGAAAACCCTCTTTCCCTTTCTCCTTCGTCTCCCGTGCTAAATACCAAATCACTCGAT 278 |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 118 CCAGAAAACCCTCTTTCCCTTTCTCCTTCGCCTCCCGTGCAAAATACCAAATCACTCGAT 177 Query 279 CGTCTCAAGACGAA-AATTCGCCAAATGGTAAACCCAATTCGCCATTCTCGTCGCAAGTA 337 |||||| |||| || ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 178 CGTCTCTAGAC-AACAATTCTCCAAATGGTAAACCCAATTCGCCACTCTCGTCGCAAGTT 236 Query 338 GCCTTAGCAGCTATTCTACTATCTTCAATTTCATC-T-T-CGCCGCTAGCTTTAGCTGTA 394 || |||||||||||||| | |||||||||||||| | | |||||| ||||||||||||| Sbjct 237 GCTTTAGCAGCTATTCTGTTCTCTTCAATTTCATCATCTCCGCCGCGAGCTTTAGCTGTA 296 Query 395 GTGGACGAACCAGCTTCTCCGTCTGTCGTTAT---AG---AATCTCAAGCTGTGAAGCCA 448 |||||||||||||||||||||||| ||||| | || || ||||||| ||||||||| Sbjct 297 GTGGACGAACCAGCTTCTCCGTCTCTCGTTGTGGAAGCTCAAGCTCAAGCAGTGAAGCCA 356 Query 449 TCGACGCCATCGCCATTGTTCATTCAGAACGAGATACTTAAGGCTCCTAGTCCTAAATCA 508 |||||| ||||||| |||||||||||||||||||||||||| || ||||||||||||||| Sbjct 357 TCGACGTCATCGCCGTTGTTCATTCAGAACGAGATACTTAAAGCACCTAGTCCTAAATCA 416 Query 509 TCGGATCTCCCAGAAGGATCACAGTGGCGATACAGCGAGTTTCTTAACGCTGTGAAGAAA 568 |||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 417 TCGGATCTTCCTGAAGGATCACAGTGGCGATACAGCGAGTTTCTTAACGCGGTGAAGAAA 476 Query 569 GGGAAAGTCGAGAGAGTTAGATTCAGCAAAGATGGTTCTGTTGTTCAGCTTACTGCCGTC 628 || || || ||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 477 GGTAAGGTGGAGAGAGTTAGATTCAGCAAAGACGGTTCTGTTGTTCAGCTTACTGCTGTC 536 Query 629 GACAATCGCCGTGCTTCAGTCATCGTCCCTAACGACCCTGACCTTATTGATATCTTGGCT 688 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 537 GACAATCGCCGTGCCTCCGTCATCGTCCCTAACGACCCTGACCTTATTGATATCTTGGCT 596 Query 689 ATGAACGGAGTTGATATATCCGTCTCTGAAGGAGAATCCTCAGGCAATGACTTGTTCACT 748 |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct 597 ATGAACGGAGTTGATATATCGGTTTCTGAAGGAGAATCCTCTGGCAATGACTTGTTCACT 656 Query 749 GTCATTGGAAACTTGATTTTCCCGCTTTTGGCCTTTGGTGGACTCTTCTTGCTTTTCAGG 808 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 657 GTCATTGGAAACTTGATTTTCCCGCTTTTGGCCTTTGGTGGACTCTTCTTGCTTTTCAGG 716 Query 809 CGAGCTCAGGGAGGCCCTGGTGGTGGTCCTGGTGGCTTGGGTGGTCCTATGGATTTCGGA 868 ||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 717 CGAGCTCAGGGCGGTCCTGGTGGTGGCCCTGGAGGCTTGGGTGGTCCTATGGATTTCGGA 776 Query 869 CGTTCTAAATCCAAGTTCCAGGAAGTGCCTGAGACTGGTGTATCATTTGCAGATGTTGCT 928 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 777 CGTTCTAAATCCAAGTTCCAGGAAGTGCCTGAGACTGGTGTGTCATTCGCAGATGTTGCT 836 Query 929 GGGGCTGATCAAGCTAAGTTGGAGTTACAGGAAGTTGTGGATTTCTTGAAGAATCCTGAT 988 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 837 GGTGCTGATCAAGCTAAGTTGGAGTTACAGGAAGTTGTGGATTTCTTGAAGAATCCTGAT 896 Query 989 AAGTACACAGCCTTGGGTGCTAAGATTCCTAAAGGGTGTTTGCTTGTTGGACCGCCTGGT 1048 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 897 AAGTACACAGCCTTGGGTGCTAAGATTCCTAAAGGGTGTTTGCTTGTTGGACCGCCTGGT 956 Query 1049 ACGGGTAAGACACTCCTGGCTAGGGCGGTGGCTGGGGAAGCTGGAGTGCCGTTCTTCTCT 1108 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| Sbjct 957 ACGGGTAAGACACTCCTGGCTAGGGCGGTGGCTGGGGAAGCAGGAGTACCGTTCTTTTCT 1016 Query 1109 TGCGCGGCCTCGGAGTTCGTAGAGCTTTTTGTGGGTGTGGGTGCATCGAGAGTTAGGGAT 1168 ||||| ||||||||||| || |||||||||||||||||||||||||| |||||||||||| Sbjct 1017 TGCGCAGCCTCGGAGTTTGTGGAGCTTTTTGTGGGTGTGGGTGCATCTAGAGTTAGGGAT 1076 Query 1169 TTGTTCGAGAAGGCTAAGTCTAAAGCCCCTTGTATTGTATTCATTGATGAGATTGACGCT 1228 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct 1077 TTGTTCGAGAAGGCTAAGTCGAAAGCACCTTGTATTGTATTCATTGATGAGATTGATGCT 1136 Query 1229 GTGGGTAGGCAGAGAGGAGCTGGGATGGGAGGAGGAAATGATGAGAGAGAACAGACTATT 1288 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1137 GTGGGGAGGCAGAGAGGAGCTGGGATGGGAGGAGGAAATGATGAGAGAGAACAGACTATT 1196 Query 1289 AATCAGCTGTTGACAGAGATGGATGGATTTTCTGGCAACTCTGGTGTGATAGTTTTGGCA 1348 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1197 AATCAGTTGTTGACGGAGATGGATGGATTTTCTGGCAACTCTGGTGTGATAGTTTTGGCA 1256 Query 1349 GCTACGAATAGGCCGGACGTTCTTGATTCGGCTTTGTTGAGGCCTGGAAGGTTTGATCGA 1408 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1257 GCTACTAATAGGCCGGACGTTCTTGATTCGGCACTGTTGAGGCCTGGAAGGTTTGATCGA 1316 Query 1409 CAGGTCACGGTGGATAGGCCTGATGTGGCTGGCAGAGTCAAGATTCTTCAGGTTCATTCT 1468 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1317 CAGGTTACGGTGGATAGGCCTGATGTGGCTGGCAGAGTCAAGATTCTCCAGGTTCATTCT 1376 Query 1469 AGGGGGAAGGCACTCGGTAAAGATGTGGACTTTGACAAGGTTGCCAGAAGGACCCCTGGT 1528 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| Sbjct 1377 AGGGGGAAGGCACTCGGTAAAGATGTGGACTTTGACAAGGTTGCGAGGAGGACCCCCGGT 1436 Query 1529 TTCACGGGTGCTGACTTACAAAACCTGATGAATGAAGCGGCGATTCTTGCGGCTAGGCGT 1588 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 1437 TTCACGGGTGCTGACTTACAAAACCTGATGAATGAAGCGGCGATTCTTGCAGCCAGGCGT 1496 Query 1589 GAGCTTAAGGAAATAAGCAAGGATGAAATCTCTGATGCTCTTGAGAGGATCATTGCTGGA 1648 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1497 GAGCTTAAGGAGATAAGCAAGGATGAAATCTCTGATGCTCTTGAGAGGATCATTGCTGGA 1556 Query 1649 CCTGAGAAGAAGAATGCAGTTGTCTCTGAAGAGAAGAAGAGACTTGTTGCATACCATGAG 1708 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1557 CCTGAGAAGAAGAATGCAGTTGTCTCTGATGAGAAGAAGAGACTTGTTGCATACCATGAG 1616 Query 1709 GCTGGTCATGCTCTAGTGGGTGCTCTTATGCCAGAATATGATCCGGTTGCAAAGATTTCT 1768 ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1617 GCTGGCCATGCTCTAGTGGGTGCTCTTATGCCGGAATATGATCCGGTTGCAAAGATTTCC 1676 Query 1769 ATCATTCCTCGTGGCCAAGCTGGTGGGCTCACtttttttGCTCCAAGCGAAGAAAGACTT 1828 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1677 ATCATTCCTCGTGGCCAAGCTGGTGGGCTCACTTTTTTTGCTCCAAGCGAAGAAAGACTT 1736 Query 1829 GAGTCTGGATTGTACAGTAGGAGCTACCTTGAGAATCAAATGGCTGTTGCACTTGGCGGA 1888 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 1737 GAGTCTGGATTGTACAGCAGGAGCTACCTCGAGAATCAAATGGCTGTTGCACTTGGCGGA 1796 Query 1889 AGGGTTGCAGAGGAGGTGATCTTTGGGGATGAGAATGTGACGACTGGAGCATCAAATGAT 1948 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1797 AGGGTTGCAGAGGAGGTGATCTTTGGGGATGAGAATGTGACGACCGGAGCATCAAATGAT 1856 Query 1949 TTCATGCAGGTGTCTCGTGTGGCACGTCAAATGATTGAGAGATTTGGGTTCAGCAAAAAG 2008 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1857 TTCATGCAGGTGTCTCGTGTGGCACGTCAAATGATTGAGAGATTTGGCTTCAGCAAAAAG 1916 Query 2009 ATTGGACAAGTTGCTGTTGGTGGCCCTGGTGGAAATCCCTTCATGGGTCAACAAATGTCA 2068 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1917 ATTGGACAAGTTGCTGTTGGTGGCCCTGGTGGAAATCCCTTTATGGGTCAACAAATGTCA 1976 Query 2069 TCACAGAAAGATTACTCAATGGCAACTGCGGATATTGTAGATGCTGAGGTGCGAGAGTTA 2128 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1977 TCACAGAAAGATTACTCAATGGCAACTGCAGATATTGTAGATGCTGAGGTGCGAGAGTTA 2036 Query 2129 GTTGAGAAGGCATACAAGAGAGCAACGGAGATCATAACAACTCATATTGATATCCTACAC 2188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2037 GTTGAGAAGGCATACAAGAGAGCAACGGAGATCATAACAACTCATATTGATATCCTACAC 2096 Query 2189 AAGCTTGCACAGCTCCTGATCGAGAAAGAAACTGTTGACGGTGAAGAGTTCATGAGTCTC 2248 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct 2097 AAGCTTGCACAGCTCCTCATCGAGAAAGAAACTGTTGACGGCGAAGAGTTCATGAGCCTC 2156 Query 2249 TTTATTGACGGCCAAGCTGAGTTGTATATTTCTTGATTCCTCAAAGTTGCCATTGCTTAG 2308 ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct 2157 TTTATTGACGGCCAAGCTGAGTTGTATATATCTTGATTCCTCAAAGTTGTCATTGCTTAG 2216 Query 2309 TGCTTACAATACCATAAGCTAATAAGTATATTCGTGTTCATATGTGTCACC 2359 ||||||||||| ||| |||| ||||||||||| |||||||||||||||||| Sbjct 2217 TGCTTACAATATCATTAGCTTATAAGTATATTTGTGTTCATATGTGTCACC 2267 > Ahg494803 jgi|Araly1|494803|fgenesh2_kg.8__619__AT5G42270.1 Length=2326 Score = 1786 bits (967), Expect = 0.0 Identities = 1526/1797 (85%), Gaps = 34/1797 (2%) Strand=Plus/Plus Query 504 AATCATCGGATCTCCCAGAAGGATCACAGTGGCGATACAGCGAGTTTCTTAACGCTGTGA 563 ||||||||||||| || || ||| |||||||||||||||| |||||||| || ||||||| Sbjct 495 AATCATCGGATCTTCCTGATGGAACACAGTGGCGATACAGTGAGTTTCTAAATGCTGTGA 554 Query 564 AGAAAGGGAAAGTCGAGAGAGTTAGATTCAGCAAAGATGGTTCTGTTGTTCAGCTTACTG 623 ||||||| ||||| |||||||| | ||| || ||||||||||||||| ||||||| || | Sbjct 555 AGAAAGGTAAAGTTGAGAGAGTGAAATTTAGTAAAGATGGTTCTGTTCTTCAGCTAACAG 614 Query 624 CCGTCGACAATCGCCGTGCTTCAGTCATCGTCCCTAACGACCCTGACCTT-ATTGATATC 682 | || || ||||| |||||| | || || || ||||| || || || || ||||||||| Sbjct 615 CTGTTGATAATCGTCGTGCTACTGTTATTGTTCCTAATGATCCGGA-TTTGATTGATATC 673 Query 683 TTGGCTATGAACGGAGTTGATATATCCGTCTCTGAAGGAGAATCCTCAGGCAATGACTTG 742 ||||| ||||| || || |||||||| || || |||||||||| || || |||| ||| Sbjct 674 TTGGCGATGAATGGTGTCGATATATCGGTTTCGGAAGGAGAAT-CT--GGAAATGGGTTG 730 Query 743 -TTCACTGTCATTGGAAACTTGATTTTCCCGCTT-TTGGCCTTTGGTGGACTCTTCTT-G 799 || | | ||||||| || ||| |||| || || ||||| ||||| || | || || Sbjct 731 TTTGA-TTTCATTGGTAATTTGCTTTTTCC-TTTGTTGGCTTTTGGAGGGTTGTT-TTAT 787 Query 800 CT-TTTCAGGCGAGCTCAGGGAGGCCCTGGTGGTGGTCCTGGTGGCTTGGGTGGTCCTAT 858 || ||| ||| ||| ||||||||| || |||||||||||| || || || |||||||| Sbjct 788 CTCTTT-AGGGGAGGTCAGGGAGG---TGCTGGTGGTCCTGGAGGTTTAGGAGGTCCTAT 843 Query 859 GGATTTCGGACGTTCTAAATCCAAGTTCCAGGAAGTGCCTGAGACTGGTGT-ATCATTTG 917 |||||||||| | || ||||| ||||| ||||||||||| || ||||| || | | |||| Sbjct 844 GGATTTCGGAAGATCGAAATCGAAGTTTCAGGAAGTGCCGGAAACTGGGGTGA-CGTTTG 902 Query 918 CAGATGTTGCTGGGGCTGATCAAGCTAAG-TTGGAGTTACAGGAAGTTGTGGATTTCTTG 976 ||||||||||| ||||||||||||||| || |||||||| |||||||| ||||||||| Sbjct 903 GTGATGTTGCTGGAGCTGATCAAGCTAAGCTT-GAGTTACAAGAAGTTGTTGATTTCTTG 961 Query 977 AAGAATCCTGATAAGTACACAGCCTTGGGTGCTAAGATTCCTAAAGGGTGTTTGCTT-GT 1035 ||||||||||||||||| || || || ||||||||||||||||||||||||||| || || Sbjct 962 AAGAATCCTGATAAGTATACTGCTTTAGGTGCTAAGATTCCTAAAGGGTGTTTG-TTGGT 1020 Query 1036 TGGACCGCCTGGTACGGGTAAGACACTCCTGGCTAGGGCGGTGGCTGGGGAAGCTGGAGT 1095 ||| || || |||||||| ||||| || ||||||| || |||||||| ||||| ||||| Sbjct 1021 TGGTCCACCGGGTACGGGGAAGACGCTTTTGGCTAGAGCTGTGGCTGGAGAAGCAGGAGT 1080 Query 1096 GCCGTTCTTCTCTTGCGCGGCCTCGGAGTTCGTAGAGCTTTTTGTGGGTGTGGGTGCATC 1155 ||||||||| || || || || |||||||| || ||||||||||| ||||||||||| || Sbjct 1081 GCCGTTCTTTTCGTGTGCTGCTTCGGAGTTTGTGGAGCTTTTTGTTGGTGTGGGTGCTTC 1140 Query 1156 GAGAGTTAGGGATTTGTTCGAGAAGGCTAAGTCTAAAGCCCCTTGTATTGTATTCATTGA 1215 ||||||||||||||||| |||||||| || || ||||| ||||||||||| || ||||| Sbjct 1141 TAGAGTTAGGGATTTGTTTGAGAAGGCGAAATCGAAAGCTCCTTGTATTGTGTTTATTGA 1200 Query 1216 TGAGATTGACGCTGTGGGTAGGCAGAGAGGAGCTGGGATGGGAGGAGGAAATGATGAGAG 1275 ||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||| Sbjct 1201 TGAGATTGATGCTGTGGGTAGGCAAAGAGGAGCTGGGATGGGTGGTGGAAATGATGAGAG 1260 Query 1276 AGAACAGACTATTAATCAGCTGTTGACAGAGATGGATGGATTTTCTGGCAACTCTGGTGT 1335 ||||||||| ||||||||||| ||||| ||||||||||| |||||||| || |||||||| Sbjct 1261 AGAACAGACGATTAATCAGCTTTTGACTGAGATGGATGGGTTTTCTGGTAATTCTGGTGT 1320 Query 1336 GATAGTTTTGGCAGCTACGAATAGGCCGGACGTTCTTGATTCGGCTTTGTTGAGGCCTGG 1395 || || ||||| || || ||||| ||||| |||||||| || || ||| |||| ||||| Sbjct 1321 CATTGTGTTGGCTGCAACCAATAGACCGGATGTTCTTGACTCCGCATTGCTGAGACCTGG 1380 Query 1396 AAGGTTTGATCGACAGGTCACGGTGGATAGGCCTGATGTGGCTGGCAGAGTCAAGATTCT 1455 || ||||| || || ||||| ||||||||||||||||| ||||| ||||||||||| || Sbjct 1381 TAGATTTGACCGGCAAGTCACAGTGGATAGGCCTGATGTAGCTGGAAGAGTCAAGATCCT 1440 Query 1456 TCAGGTTCATTCTAGGGGGAAGGC-ACTCGGTAAAGATGTGGACTT-TGACAAGGTTGCC 1513 ||||| |||||||| |||||||| | | || || |||||||| || ||| || ||||| Sbjct 1441 GCAGGTGCATTCTAGAGGGAAGGCTA-TTGGGAAGGATGTGGA-TTATGAGAAAGTTGCG 1498 Query 1514 AGAAGGACCCCTGGTTTCACGGGTGCTGACTTACAAAACCTGATGAATGAAGCGGCGATT 1573 || || || || |||||||| |||||||| ||||| ||||||||||||||||| |||||| Sbjct 1499 AGGAGAACTCCGGGTTTCACTGGTGCTGATTTACAGAACCTGATGAATGAAGCTGCGATT 1558 Query 1574 CTTGCGGCTAGGCGTGAGCTTAAGGAAATAAGCAAGGATGAAATCTCTGATGCTCTTGAG 1633 ||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct 1559 CTTGCGGCTAGACGTGAGCTTAAGGAGATAAGCAAGGATGAAATATCCGATGCTCTTGAG 1618 Query 1634 AGGATCATTGCTGGACCTGAGAAGAAGAATGCAGTTGTCTCTGAAGAGAAGAAGAGACTT 1693 ||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct 1619 AGGATCATTGCTGGACCGGAGAAGAAGAATGCTGTTGTCTCAGAGGAGAAGAAGAGACTT 1678 Query 1694 GTTGCATACCATGAGGCTGGTCATGCTCTAGTGGGTGCTCTTATGCCAGAATATGATCCG 1753 ||||| || ||||||||||| |||||| |||| ||||| |||||||| || || ||||| Sbjct 1679 GTTGCTTATCATGAGGCTGGGCATGCTTTAGTTGGTGCACTTATGCCGGAGTACGATCCA 1738 Query 1754 GTTGCAAAGATTTCTATCATTCCTCGTGGCCAAGCTGGTGGGCTCACtttttttGCTCCA 1813 || || ||||| || || ||||| ||||| ||||||||||||||||| ||||| || || Sbjct 1739 GTGGCCAAGATATCGATTATTCCACGTGGTCAAGCTGGTGGGCTCACCTTTTTCGCCCCT 1798 Query 1814 AGCGAAGAAAGACTTGAGTCTGGATTGTACAGTAGGAGCTACCTTGAGAATCAAATGGCT 1873 |||||||| |||||||||||||||||||| || || |||||||||||||||||||||||| Sbjct 1799 AGCGAAGAGAGACTTGAGTCTGGATTGTATAGCAGAAGCTACCTTGAGAATCAAATGGCT 1858 Query 1874 GTTGCACTTGGCGGAAGGGTTGCAGAGGAGGTGATCTTTGGGGATGAGAATGTGACGACT 1933 ||||||||||| |||||||||||||| |||||||||||||| || |||||||| || || Sbjct 1859 GTTGCACTTGGTGGAAGGGTTGCAGAAGAGGTGATCTTTGGTGACGAGAATGTAACAACC 1918 Query 1934 GGAGCATCAAATGATTTCATGCAGGTGTCTCGTGTGGCACGTCAAATGATTGAGAGATTT 1993 ||||||||||| ||||||||||||||||| || ||||| || |||||| |||||||||| Sbjct 1919 GGAGCATCAAACGATTTCATGCAGGTGTCACGAGTGGCTCGCCAAATGGTTGAGAGATTC 1978 Query 1994 GGGTTCAGCAAAAAGATTGGACAAGTTGCTGTTGGTGGCCCTGGTGGAAATCCCTT-CAT 2052 ||||||||||||||||||||||||||||| |||||||| | || ||||| ||||| | | Sbjct 1979 GGGTTCAGCAAAAAGATTGGACAAGTTGCAGTTGGTGGAGCAGGAGGAAA-CCCTTTCTT 2037 Query 2053 GGGTCAACAA-ATGTCATCACAGAAAGATTACTCAATGGCAACTGCGGATATTGTAGATG 2111 ||||||| | |||||||||||||| ||||||||||||||||| |||||| | || |||| Sbjct 2038 GGGTCAA-AGTATGTCATCACAGAAGGATTACTCAATGGCAACAGCGGATGTGGTTGATG 2096 Query 2112 CTGAGGTGCGAGAGTTAGTTGAGAAGGCATACAAGAGAGC-AACGGAGATCATAACAACT 2170 | || ||| ||||| | || |||||||| ||| ||| || || | ||||||||||||| Sbjct 2097 CCGAAGTGAGAGAGCTGGTAGAGAAGGCGTACGTGAGGGCGAAAG-AGATCATAACAACA 2155 Query 2171 CATATTGATATCCTACACAAGCTTGCACAGCTCCTGATCGAGAAAGAAACTGTTGACGGT 2230 || ||||||||| ||||||||||||| |||||||| || |||||||||||||| || || Sbjct 2156 CAAATTGATATCTTACACAAGCTTGCGCAGCTCCTAATTGAGAAAGAAACTGTGGATGGA 2215 Query 2231 GAAGAGTTCATGAGTCTCTTT-ATTGACGGCCAAGCTGAGTTGTATATTTCTTGATT 2286 |||||||||||||| || ||| |||||||| ||||||||||||||| |||||| ||| Sbjct 2216 GAAGAGTTCATGAGCCT-TTTCATTGACGGACAAGCTGAGTTGTATGTTTCTTAATT 2271 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 93206829515 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5