BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G51590.1 Length=2040 Score E Sequences producing significant alignments: (Bits) Value Ahg474272 jgi|Araly1|474272|fgenesh2_kg.1__4226__AT1G51590.1 2957 0.0 Ahg479633 jgi|Araly1|479633|fgenesh2_kg.3__2334__AT3G21160.1 1705 0.0 Ahg895816 jgi|Araly1|895816|Al_scaffold_0006_3812 250 3e-65 > Ahg474272 jgi|Araly1|474272|fgenesh2_kg.1__4226__AT1G51590.1 Length=1958 Score = 2957 bits (1601), Expect = 0.0 Identities = 1811/1904 (95%), Gaps = 48/1904 (3%) Strand=Plus/Plus Query 18 ACTAAAATCGGATCTATAACTTTTGTTCTTTGAGAG--A-CTTA---------TTTCTCT 65 ||| ||||||||||||||||||| |||||||||||| | |||| ||||||| Sbjct 1 ACTTAAATCGGATCTATAACTTTGGTTCTTTGAGAGAAAGCTTATCTCTTTCTTTTCTCT 60 Query 66 CTCGGTTTCTTACTCTTTTCGGATC-AGAAATTTAAAAGCTTTTAACTTTTGTCTTGCTC 124 ||| ||||||||||| ||||||||| ||||||||||||| | | | || ||| Sbjct 61 CTCTGTTTCTTACTC-TTTCGGATCAAGAAATTTAAAAG-------C---T-T-TT-CTC 106 Query 125 TGTTTCATGGACACTGATTTCTCAATTGGTCTCTGTTTTTGTTGAGTGGGTTGAGAAGAG 184 ||||||||||| ||||||||||||||||||||||| || || | ||| | | || Sbjct 107 TGTTTCATGGAAACTGATTTCTCAATTGGTCTCTG---TT-TT---T--GTT--G-A-AG 153 Query 185 AGATGGCGAGAAGTAGATCGATTAGTGGTTATGGGATATGGAAATATTTGAATCCTGCGT 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 154 AGATGGCGAGAAGTAGATCGATTAGTGGTTATGGGATATGGAAATATTTGAATCCTGCGT 213 Query 245 ATTATCTTAGAAGACCGAGACGTTTGGCTTTGCTTTTCATTGTCTTCGTCTCTGTTTCTA 304 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct 214 ATTATCTTAGAAGACCAAGACGTCTGGCTTTGCTTTTCATTGTCTTCGTCTCTGTTTCTA 273 Query 305 TGCTTGTCTGGGATCGTATTAATCTTGCCCGAGAACATGAGGTTGAAGTTTTTAAGCTAA 364 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| Sbjct 274 TGCTTGTCTGGGATCGTATAAATCTTGCCCGAGAACATGAGGTTGAAGTTTTAAAGTTAA 333 Query 365 ATGAAGAAGTTTCACGGTTGGAGCAGATGTTAGAAGAGCTTAATGGTGGTGTTGGC-A-- 421 ||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 334 ATGGAGAAGTTTCACGGTTGGAGCAGATGTTAGAAGAGCTTAA---AGGTGTTGGCGATG 390 Query 422 ATAAGCCTTTGAAGACTCTGAAGGATGCCCCAGAAGATCCAGTTGATAAACAGCGAAGGC 481 ||||||||||||||| ||||||||||| ||||||| ||||||||||| |||||||||| Sbjct 391 ATAAGCCTTTGAAGAATCTGAAGGATGTCCCAGAAAATCCAGTTGATGTCCAGCGAAGGC 450 Query 482 AGAAAGTAAAAGAGGCAATGATCCATGCTTGGAGCTCTTATGAAAAGTATGCATGGGGGA 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 451 AGAAAGTAAAAGAGGCAATGATCCATGCTTGGAGCTCTTATGAAAAGTATGCATGGGGAA 510 Query 542 AAGATGAGCTTCAGCCTCGGACAAAAGATGGCACTGATAGCTTTGGTGGCCTTGGAGCAA 601 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 511 AAGATGAGCTTCAGCCTCGAACAAAAGATGGCACTGATAGTTTTGGTGGCCTTGGAGCAA 570 Query 602 CTATGGTAGATTCTTTAGATACACTCTATATAATGGGTCTAGATGAGCAGTTTCAAAAAG 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 571 CTATGGTAGATTCTTTAGATACACTCTATATAATGGGTCTAGATGAGCAGTTTCAAAAAG 630 Query 662 CCAGAGAGTGGGTTGCAAGCTCATTGGATTTCGACAAGGATTATGACGCCAGTATGTTTG 721 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 631 CCAGAGAGTGGGTAGCAAGCTCATTGGATTTCGACAAGGATTATGACGCCAGTATGTTTG 690 Query 722 AGACAACCATAAGAGTTGTAGGCGGACTTCTTAGTGCGTATGATCTTTCTGGGGACAAAA 781 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 691 AGACAACCATAAGAGTTGTAGGCGGACTTCTTAGTGCATATGATCTTTCTGGGGACAAAA 750 Query 782 TGTTCCTTGAAAAGGCTAAGGATATTGCAGACAGATTATTGCCTGCATGGAATACTCCAA 841 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 751 TGTTCCTTGAAAAGGCTAAGGATATTGCAGACAGATTATTGCCTGCATGGAACACTCCAA 810 Query 842 CGGGTATACCTTACAATATTATCAACTTGAGAAATGGAAATGCTCACAATCCTTCATGGG 901 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 811 CGGGTATACCTTACAATATCATCAACTTGAGAAATGGAAATGCTCACAATCCTTCATGGG 870 Query 902 CGGCAGGGGGAGACAGTATTCTCGCAGACTCCGGCACTGAGCAGCTCGAGTTTATTGCCC 961 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 871 CGGCAGGGGGAGACAGTATTCTTGCAGACTCCGGCACTGAGCAGCTCGAGTTTATTGCCC 930 Query 962 TTTCCCAAAGGACAGGGGACCCAAAATATCAGCAGAAGGTAGAGAAGGTTATTACAGAAC 1021 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 931 TTTCCCAAAGGACAGGGGACCCAAAATATCAGCAGAAGGTAGAGAAGGTTATTACAGAAC 990 Query 1022 TGAATAAGAACTTTCCTGCTGATGGTTTACTTCCCATCTATATAAATCCGGATAATGCTA 1081 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 991 TGAATAAGAACTTTCCTGCTGATGGTTTACTTCCCATCTATATAAATCCGGATAATGCTA 1050 Query 1082 ATCCATCGTACTCTACCACAACATTTGGTGCCATGGGAGATAGCTTTTATGAGTATTTGC 1141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1051 ATCCATCGTACTCTACCACAACATTTGGTGCCATGGGAGATAGCTTTTATGAGTATTTGC 1110 Query 1142 TCAAAGTTTGGGTGCAAGGGAACAAAACATCTGCCGTGAAACCCTATAGAGATATGTGGG 1201 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 1111 TCAAAGTTTGGGTGCAAGGGAACAAAACATCCGCGGTGAAACCCTATAGAGATATGTGGG 1170 Query 1202 AGAAATCAATGAAAGGTTTGTTAAGCTTGGTCAAGAAATCAACACCTTCATCATTTACGT 1261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1171 AGAAATCAATGAAAGGTTTGTTAAGCTTGGTCAAGAAATCAACACCTTCATCATTTACAT 1230 Query 1262 ATATATGTGAGAAGAACGGAAATAATTTGATTGATAAGATGGATGAATTGGCGTGCTTTG 1321 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1231 ATATATGCGAGAAGAACGGAAATAATTTGATTGATAAGATGGATGAATTGGCGTGCTTTG 1290 Query 1322 CTCCTGGAATGTTGGCTTTAGGAGCTTCAGGTTATGGCCCTGATGAAGaaaaaaaGTTTC 1381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1291 CTCCTGGAATGTTGGCTTTAGGAGCTTCAGGTTATGGCCCTGATGAAGAAAAAAAGTTTC 1350 Query 1382 TTTCACTTGCTGGAGAGCTTGCCTGGACTTGTTATAACTTTTACCAATCGACACCAACGA 1441 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1351 TTTCACTCGCTGGAGAGCTTGCCTGGACTTGTTATAACTTTTACCAATCGACACCAACGA 1410 Query 1442 AACTTGCTGGAGAGAACTATTTCTTCACTGCAGGGCAGGACATGAGTGTTGGCACATCTT 1501 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1411 AACTCGCTGGAGAGAACTATTTCTTCACTGCAGGGCAGGACATGAGTGTTGGAACATCTT 1470 Query 1502 GGAACATTTTAAGACCAGAAACCGTTGAATCACTGTTTTACCTCTGGCGATTAACTGGGA 1561 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1471 GGAACATTTTAAGACCAGAAACCGTTGAATCGCTGTTTTACCTCTGGCGATTAACTGGGA 1530 Query 1562 ACAAGACATATCAAGAGTGGGGATGGAATATATTTC-AAGCATTTGAGAAGAACTCTCGC 1620 |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct 1531 ACAAGACATATCAAGAGTGGGGATGGAATATATT-CGAAGCATTTGAGAAGAACTCTCGC 1589 Query 1621 GTAGAATCTGGATATGTAGGCTTGAAGGATGTCAATACAGGTGCTAAAGACAACAAGATG 1680 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1590 GTAGAATCTGGATATGTAGGCTTGAAGGATGTGAATACAGGTGCTAAAGACAACAAGATG 1649 Query 1681 CAAAGCTTCTTCTTAGCTGAGACTCTTAAGTATCTATATCTTCTCTTTTCGCCTTCATCT 1740 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1650 CAAAGCTTCTTCTTAGCTGAGACTCTTAAGTACCTTTATCTTCTCTTTTCGCCTTCATCG 1709 Query 1741 GTTATTTCATTAGACGAGTGGGTTTTCAACACAGAAGCCCATCCGCTTAAGATTGTGGCA 1800 ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1710 GTTATTTCACTAGACGAGTGGGTTTTCAACACAGAAGCTCATCCGCTTAAGATTGTGGCA 1769 Query 1801 CGGAATGATCCGCGTAAGCCAACTATAGCACTACGCCAGAGGAAGTTTGGTCATCAGATT 1860 |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1770 CGGAATGATCCGCGTAAGCCAAAAATAGCACTACGCCAGAGGAAGTTTGGTCAGCAGATT 1829 Query 1861 AACGTTTAGTAGACAGTTTCTGCTCAAATGGAATTTGATATTAT 1904 || ||||||||||||||||||||| |||||||||||| |||||| Sbjct 1830 AAGGTTTAGTAGACAGTTTCTGCTAAAATGGAATTTGTTATTAT 1873 Score = 137 bits (74), Expect = 3e-31 Identities = 84/89 (94%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 1946 TTAAAGAACAGATGGACAACGTTTTTGCCACAGCAATTTGTAGAGGTACTTTACTGTTTC 2005 ||| |||||||| |||||| |||||||||||||||||| ||||| ||||||||||||||| Sbjct 1870 TTATAGAACAGAAGGACAAAGTTTTTGCCACAGCAATTAGTAGAAGTACTTTACTGTTTC 1929 Query 2006 CTATGATTTTTGGATTTGTAGAAGAGCtt 2034 ||||||||||||||||||||||||||||| Sbjct 1930 CTATGATTTTTGGATTTGTAGAAGAGCTT 1958 > Ahg479633 jgi|Araly1|479633|fgenesh2_kg.3__2334__AT3G21160.1 Length=2062 Score = 1705 bits (923), Expect = 0.0 Identities = 1402/1631 (86%), Gaps = 42/1631 (3%) Strand=Plus/Plus Query 185 AGATGGCGA-GAAGTAGA-TCGATTAGTGGTTATGGGATATGGAAATATTTGAATCCTGC 242 ||||||||| ||| || | | | | | |||| |||||||||||||||| || || ||||| Sbjct 62 AGATGGCGAGGAA-TAAACTTG-TAAATGGTCATGGGATATGGAAATACTTCAACCCTGC 119 Query 243 GTATTATCTTAGAAGACCGAGACGT-TTGGCTTTGCTTTTCATTGTCTTCGTCTCTGTTT 301 || |||||| ||||||| |||||| || |||||||| ||||| ||||| ||||||||| Sbjct 120 GTTTTATCTCCGAAGACCAAGACGTCTT-GCTTTGCTCATCATTCTCTTCTTCTCTGTTT 178 Query 302 CTATGCTTGTCTGGGATCGT-ATTAATCTTGCCCGAGAAC-ATGAGGTTGAAGTTTTTAA 359 | ||| | || ||||||||| | | |||| |||||| || | || ||||||||| || Sbjct 179 CCATGGTGGTTTGGGATCGTCAAT-CTCTTTCCCGAG-ACTACCAGTTTGAAGTTTCCAA 236 Query 360 GCTAAATGAAGAAGTTTCACGGTTGGAGCAGATGTTAGAAGAGCTTAATG-GTGGTGTTG 418 | ||||||||||||||| |||||| |||||||||| |||||| ||| | | | | || Sbjct 237 GTTAAATGAAGAAGTTTTGCGGTTGCAGCAGATGTTGGAAGAG-ATAAAGAGCGTTACTG 295 Query 419 -GCAATAAGCCTTTGAAGACTCTGAAGGATGCCCCA-GAAGATCCAGTTGATAAACAGCG 476 | || | || | |||| | ||||||||| || ||||||||||||||| ||||| Sbjct 296 AG-GATGTGTCTGTCAAGAGTTTGAAGGATG-TTCAGGAAGATCCAGTTGATGCTCAGCG 353 Query 477 AAGGCAGAAAGTAAAAGAGGCAATGATCCATGCTTGGAGCTCTTATGAAAAGTATGCATG 536 || ||||| ||| ||||| |||||||| ||||||||||| || |||||||||||||| | Sbjct 354 AATGCAGAGAGTTAAAGAAGCAATGATTCATGCTTGGAGTTCATATGAAAAGTATGC-TT 412 Query 537 GGGGA-AAGATGAGCTTCAGCCTCGGACAAAAGATGGCACTGATAGCTTTGGTGGCCTTG 595 ||||| |||||||||||||||| | ||||||||||||| ||| |||||||||||||| | Sbjct 413 GGGGACAAGATGAGCTTCAGCCCCAGACAAAAGATGGCGTTGACAGCTTTGGTGGCCTGG 472 Query 596 GAGCAACTATGGTAGATTCTTTAGATACACTCTATATAATGGGTCTAGATGAGCAGTTTC 655 | ||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 473 GTGCAACTATGATAGATGCATTAGATACACTCTATATAATGGGTCTAGATGAGCAGTTTC 532 Query 656 AAAAAGCCAGAGAGTGGGTTGCAAGCTCATTGGATTTCGACAAGGATTATGACGCCAGTA 715 | ||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| Sbjct 533 AGAAAGCCAGAGAGTGGGTAGCAAGCTCATTAGATTTCGACAAGGATTATGCCGCCAGTA 592 Query 716 TGTTTGAGACAACCATAAGAGTTGTAGGCGGACTTCTTAGTGCGTATGATCTTTCTGGGG 775 |||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||| Sbjct 593 TGTTTGAGACAACCATAAGAGTGGTAGGAGGGCTTCTCAGTGCGTATGATCTTTCTGGGG 652 Query 776 ACAAAATGTTCCTTGAAAAGGCTAAGGATATTGCAGACAGATTATTGCCTGCATGGAATA 835 | ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| | | Sbjct 653 ATAAAATTTTCCTCGAAAAGGCTACGGATATTGCAGACAGATTATTGCCTGCATGGGACA 712 Query 836 CTCCAA-CGGGTATACCTTACAATATTATCAACTTGA-GAAATGGAAATGCTCACAATCC 893 ||| || |||||||||| || |||||||||||||||| | | |||||||||||||||||| Sbjct 713 CTC-AATCGGGTATACCATATAATATTATCAACTTGAAGCA-TGGAAATGCTCACAATCC 770 Query 894 TTCATGGGCGGCAGGGGGAGACAGTATTCTCGCAGACTCCGGCACTGAGCAGCTCGAGTT 953 | ||||||||| |||| |||||||||||| ||||| || || ||||||||||| || || Sbjct 771 TACATGGGCGG--GGGG-AGACAGTATTCTTGCAGATTCTGGTACTGAGCAGCTTGAATT 827 Query 954 TATTGCCCTTTCCCAAAGGACAGGGGACCCAAAATATCAGCAGAAGGTAGAGAAGGTTAT 1013 ||||||||||||| | |||||||||||||||||||||||||| |||||||| |||||||| Sbjct 828 TATTGCCCTTTCCGAGAGGACAGGGGACCCAAAATATCAGCAAAAGGTAGAAAAGGTTAT 887 Query 1014 TACAGAACTGAATAAGAACTTTCCTGCTGATGGTTTACTTCCCATCTATATAAATCCGGA 1073 | ||| ||| ||||||||||| |||||||||||| ||||||| || ||||||||||| || Sbjct 888 TTCAGTACTAAATAAGAACTTCCCTGCTGATGGTCTACTTCCGATATATATAAATCCCGA 947 Query 1074 TA-ATGCTAATCCATCGTACTCTACCACAACATTTGGTGCCATGGGAGATAGCTTTTATG 1132 || | ||||| |||||||||||||||| ||||||||||||||||||||| |||||||| | Sbjct 948 TACA-GCTAAGCCATCGTACTCTACCATAACATTTGGTGCCATGGGAGACAGCTTTTACG 1006 Query 1133 AGTATTTGCTCAAAGTTTGGGTGCAAGGGAACAAAACATCTGCCGTGAAACCCTATAGAG 1192 | ||||||||||||||||||||| ||||||||||| || || ||||||| |||||||| Sbjct 1007 AATATTTGCTCAAAGTTTGGGTGTTTGGGAACAAAACTTCAGCAGTGAAACACTATAGAG 1066 Query 1193 ATATGTGGGAGAAATCAATGAAAGGTTTGTTAAGCTTGGTCAAGAAATCAACACCTTCAT 1252 |||||||||||||||||||||| ||| || |||||||||| | |||||| ||||| || | Sbjct 1067 ATATGTGGGAGAAATCAATGAATGGTCTGCTAAGCTTGGTTAGGAAATCTACACCGTCGT 1126 Query 1253 CATTTACGTATATATGTGAGAAGAACGGAAATAATTTGATTGATAA---GATGGATGAAT 1309 | ||||| ||||| ||||||||||| |||||| || ||| ||||| ||||||||||| Sbjct 1127 CGTTTACATATATCTGTGAGAAGAATGGAAAT--TT-GATCGATAATCAGATGGATGAAT 1183 Query 1310 TGGCGTGCTTTGCTCCTGGAATGTTGGCTTTAGGAGCTTCAGGTTAT-G-GC-CCTGATG 1366 |||| ||||||||||| |||||||||||||||||||| || || ||| | | |||| || Sbjct 1184 TGGCATGCTTTGCTCCCGGAATGTTGGCTTTAGGAGCATCTGGGTATAGTGATCCTGCTG 1243 Query 1367 AAGaaaaaaaGTTTCTTTCACTTGCTGGAGAGCTTGCCTGGACTTGTTATAACTTTTACC 1426 ||| ||| |||||||| ||||| || | ||||||||| ||||| |||||||||||||||| Sbjct 1244 AAGGAAAGAAGTTTCTCTCACTCGCCGAAGAGCTTGCATGGACGTGTTATAACTTTTACC 1303 Query 1427 AATCGACACCAACGAAACTTGCTGGAGAGAACTATTTCTTCA-CTGCAGGGCAG-GACAT 1484 ||||||||||||| ||||| ||||| ||||| |||||||||| || | ||| || ||||| Sbjct 1304 AATCGACACCAACAAAACTGGCTGGGGAGAATTATTTCTTCAACT-CTGGG-AGTGACAT 1361 Query 1485 GAGTGTTGGCACATCTTGGAACATTTTAAGACCAGAAACCGTTGAATCACTGTTTTACCT 1544 ||||||||| || || |||||||| || ||||||||||| || ||||||||||||||||| Sbjct 1362 GAGTGTTGGAACGTCGTGGAACATCTTGAGACCAGAAACTGTCGAATCACTGTTTTACCT 1421 Query 1545 CTGGCGATTAACTGGGAACAAGACATATCAAGAGTGGGGATGGAATATATTTCAAGCATT 1604 |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1422 CTGGCGGTTAACTGCCAACAAGACATATCAAGAGTGGGGATGGAATATATTTGAAGCATT 1481 Query 1605 TGAGAAGAACTCTCGCGTAGAATCTGGATATGTAGGCTTGAAGGATGTCAATACAGGTGC 1664 |||||||||||| ||| |||| ||||||||||| || ||||||||||| |||||||| | Sbjct 1482 TGAGAAGAACTCGCGCATAGAGTCTGGATATGTCGGTTTGAAGGATGTTAATACAGGCGT 1541 Query 1665 TAAAGACAACAAGATGCAAAGCTTCTTC-TTAGCTGAGACTCTTAAGTATCTATATCTTC 1723 ||| |||||||||||||||||||||||| || |||||||| || |||||||| ||||| | Sbjct 1542 TAAGGACAACAAGATGCAAAGCTTCTTCCTT-GCTGAGACACTCAAGTATCTCTATCTAC 1600 Query 1724 TCTTTTCGCCTTCATCTGTTATTTCATTAGACGAGTGGGTTTTCAACACAGAAGCCCATC 1783 |||| ||||| || | || ||| | |||||||||||||| |||||||||||||| || | Sbjct 1601 TCTTCTCGCCCACAACAGTCATTCCCTTAGACGAGTGGGTATTCAACACAGAAGCTCACC 1660 Query 1784 CGCTTAAGATT 1794 | ||||||||| Sbjct 1661 CACTTAAGATT 1671 > Ahg895816 jgi|Araly1|895816|Al_scaffold_0006_3812 Length=279 Score = 250 bits (135), Expect = 3e-65 Identities = 152/160 (95%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 187 ATGGCGAGAAGTAGATCGATTAGTGGTTATGGGATATGGAAATATTTGAATCCTGCGTAT 246 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1 ATGGCGAGAAGTAGATCGATTAGTGGTTATGGGATATGGAAATATTTGAATCATGCGTAT 60 Query 247 TATCTTAGAAGACCGAGACGTTTGGCTTTGCTTTTCATTGTCTTCGTCTCTGTTTCTATG 306 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 61 TATCTTGGAAGACCGAGACGCTTGGCTTTGCTTTTCATTGTCTTCGTCTCTGTTTCTATG 120 Query 307 CTTGT-CTGGGATCGTATTAATCTTGCCCGAGAACATGAG 345 ||||| | |||||||||| |||||| ||||||||||||| Sbjct 121 CTTGTTC-GGGATCGTATAAATCTTTTCCGAGAACATGAG 159 Score = 193 bits (104), Expect = 5e-48 Identities = 112/116 (97%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 554 AGCCTCGGACAAAAGATGGCACTGATAGCTTTGGTGGCCTTGGAGCAACTATGGTAGATT 613 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 158 AGCCTCAGACAAAAGATGGCACTGATAGCTTTGGTGGCCTTGGAGCAACTATGGTAGATT 217 Query 614 CTTTAGATACACTCTATATAATGGGTCTAGATGAGCAGTTTCAAAAAGCCAGAGAG 669 |||||||||||||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct 218 CTTTAGATACACTCTATATAATGGGTCTGGATGAGCAGTTTCAGAAAGCGAGAGAG 273 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76713753430 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5